RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 PRAM1Q96QH2 718 aa3.2□□□□□ -1.9
SMARCB1-208ENST00000634926 FOXB1Q99853 325 aa3.2□□□□□ -1.9
SMARCB1-208ENST00000634926 CPPED1Q9BRF8 314 aaPredicted RBP3.2□□□□□ -1.9
SMARCB1-208ENST00000634926 RTFDC1Q9BY42 306 aaPredicted RBP3.2□□□□□ -1.9
SMARCB1-208ENST00000634926 TCF7L1Q9HCS4 588 aa3.2□□□□□ -1.9
SMARCB1-208ENST00000634926 TLK1Q9UKI8 766 aa3.2□□□□□ -1.9
SMARCB1-208ENST00000634926 SPO11Q9Y5K1 396 aa3.2□□□□□ -1.9
SMARCB1-208ENST00000634926 AATKQ6ZMQ8 1374 aa3.2□□□□□ -1.9
SMARCB1-208ENST00000634926 KIAA0232Q92628 1395 aa3.2□□□□□ -1.9
SMARCB1-208ENST00000634926 FAM208AQ9UK61 1670 aaKnown RBP3.2□□□□□ -1.9
SMARCB1-208ENST00000634926 SPATA31A1Q5TZJ5 1347 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 GOLGA6CA6NDK9 693 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 GOLGA6BA6NDN3 693 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 CYSRT1A8MQ03 144 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 H7C1D1 291 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 FZD9O00144 591 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 DVL2O14641 736 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 TGM5O43548 720 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 CAND2O75155 1236 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 SPDEFO95238 335 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 ESRRBO95718 433 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 PRLP01236 227 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 GOLGA6DP0CG33 693 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 U2AF1L5P0DN76 240 aaPredicted RBP3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 EGR2P11161 476 aaPredicted RBP3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 ZSCAN20P17040 1043 aaPredicted RBP3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 AVPR1BP47901 424 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 PROK1P58294 105 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 U2AF1Q01081 240 aaKnown RBP eCLIP3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 SLC6A3Q01959 620 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 TERF2Q15554 542 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 ZNF174Q15697 407 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 DGKDQ16760 1214 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 ABCB5Q2M3G0 1257 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 BROXQ5VW32 411 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 BTNL9Q6UXG8 535 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 KRT27Q7Z3Y8 459 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 RASSF3Q86WH2 238 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 CPEB3Q8NE35 698 aaKnown RBP3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 TTC8Q8TAM2 541 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 FUBP3Q96I24 572 aaKnown RBP eCLIP3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 WDR92Q96MX6 357 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 RHOBTB2Q9BYZ6 727 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 VTA1Q9NP79 307 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 SEMA4GQ9NTN9 838 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 ING3Q9NXR8 418 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 GOLGA6AQ9NYA3 693 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 H2AFY2Q9P0M6 372 aaPredicted RBP3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 ZNF180Q9UJW8 692 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 MAP3K2Q9Y2U5 619 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 CD163L1Q9NR16 1453 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 LTN1O94822 1766 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 BTAF1O14981 1849 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 LY75O60449 1722 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 ANKRD26Q9UPS8 1709 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 USP6P35125 1406 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 CPSF1Q10570 1443 aaKnown RBP3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 TNS2Q63HR2 1409 aa3.19□□□□□ -1.9
SMARCB1-208ENST00000634926 BRD4O60885 1362 aaPredicted RBP3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 NINLQ9Y2I6 1382 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 WDR91A4D1P6 747 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 WIPF3A6NGB9 483 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 TRIM75PA6NK02 468 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 RNASET2O00584 256 aaKnown RBP3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 SNUPNO95149 360 aaKnown RBP3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 MYBL2P10244 700 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 RBP3P10745 1247 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 CCND1P24385 295 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 LSP1P33241 339 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 IARSP41252 1262 aaKnown RBP3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 RNASE9P60153 205 aaKnown RBP3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 SIM1P81133 766 aaPredicted RBP3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 IRF9Q00978 393 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 LRRC32Q14392 662 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 CXorf57Q6NSI4 855 aaKnown RBP3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 C14orf80Q86SX3 495 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 ARHGEF25Q86VW2 580 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 XYLT1Q86Y38 959 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 SLC44A3Q8N4M1 653 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 MAGEB6Q8N7X4 407 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 KIAA1958Q8N8K9 716 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 ZNF610Q8N9Z0 462 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 C1orf162Q8NEQ5 155 aaPredicted RBP3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 JPH3Q8WXH2 748 aaPredicted RBP3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 NELL1Q92832 810 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 DYDC2Q96IM9 177 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 FAXDC2Q96IV6 333 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 ELF4Q99607 663 aaPredicted RBP3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 SOX7Q9BT81 388 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 C14orf119Q9NWQ9 140 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 STK26Q9P289 416 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 ANKRD6Q9Y2G4 727 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 LUC7L2Q9Y383 392 aaKnown RBP3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 OVOS2A0A0G2JMS6 1433 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 OVOS2A0A0J9YW53 1432 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 CRB1P82279 1406 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 OVOS2Q6IE36 1432 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 PPIP5K1Q6PFW1 1433 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 WASHC2AQ641Q2 1341 aa3.18□□□□□ -1.9
SMARCB1-208ENST00000634926 GPRASP1Q5JY77 1395 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms