RNA–Protein interactions for RNA: ENST00000622320.4

RRP12-215, Transcript of ribosomal RNA processing 12 homolog, human

TSL 4

Gene RRP12, Length 543 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RRP12-215	ENST00000622320	SLC37A4	O43826	429 aa		11.31	□□□□□ -0.6
RRP12-215	ENST00000622320	PRAMEF12	O95522	483 aa		11.31	□□□□□ -0.6
RRP12-215	ENST00000622320	EGF	P01133	1207 aa		11.31	□□□□□ -0.6
RRP12-215	ENST00000622320	RDX	P35241	583 aa	Known RBP	11.31	□□□□□ -0.6
RRP12-215	ENST00000622320	HMGN5	P82970	282 aa	Known RBP	11.31	□□□□□ -0.6
RRP12-215	ENST00000622320	CACNB1	Q02641	598 aa	Predicted RBP	11.31	□□□□□ -0.6
RRP12-215	ENST00000622320	LMAN2	Q12907	356 aa		11.31	□□□□□ -0.6
RRP12-215	ENST00000622320	UPP1	Q16831	310 aa		11.31	□□□□□ -0.6
RRP12-215	ENST00000622320	KRT25	Q7Z3Z0	450 aa		11.31	□□□□□ -0.6
RRP12-215	ENST00000622320	RAB44	Q7Z6P3	723 aa	Predicted RBP	11.31	□□□□□ -0.6
RRP12-215	ENST00000622320	BPIFB1	Q8TDL5	484 aa		11.31	□□□□□ -0.6
RRP12-215	ENST00000622320	OXER1	Q8TDS5	423 aa		11.31	□□□□□ -0.6
RRP12-215	ENST00000622320	TMX3	Q96JJ7	454 aa		11.31	□□□□□ -0.6
RRP12-215	ENST00000622320	PRIMPOL	Q96LW4	560 aa		11.31	□□□□□ -0.6
RRP12-215	ENST00000622320	CCDC86	Q9H6F5	360 aa	Known RBP	11.31	□□□□□ -0.6
RRP12-215	ENST00000622320	OBP2A	Q9NY56	170 aa		11.31	□□□□□ -0.6
RRP12-215	ENST00000622320	EBF1	Q9UH73	591 aa		11.31	□□□□□ -0.6
RRP12-215	ENST00000622320	AFF4	Q9UHB7	1163 aa	Known RBP	11.31	□□□□□ -0.6
RRP12-215	ENST00000622320	DDX25	Q9UHL0	483 aa	Known RBP	11.31	□□□□□ -0.6
RRP12-215	ENST00000622320	FBXL5	Q9UKA1	691 aa		11.31	□□□□□ -0.6
RRP12-215	ENST00000622320	INVS	Q9Y283	1065 aa		11.31	□□□□□ -0.6
RRP12-215	ENST00000622320	GDA	Q9Y2T3	454 aa		11.31	□□□□□ -0.6
RRP12-215	ENST00000622320	APC2	O95996	2303 aa		11.31	□□□□□ -0.6
RRP12-215	ENST00000622320	ABCA7	Q8IZY2	2146 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	TRIP11	Q15643	1979 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	ACACA	Q13085	2346 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	LRRIQ4	A6NIV6	560 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	TTLL13P	A6NNM8	815 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	SYN3	O14994	580 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	PRB1	P04280	392 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	CPB1	P15086	417 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	BCKDHB	P21953	392 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	ARL2	P36404	184 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	DHPS	P49366	369 aa	Predicted RBP	11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	DGKE	P52429	567 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	CYP4A11	Q02928	519 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	C19orf57	Q0VDD7	668 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	SEMA3B	Q13214	749 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	DMC1	Q14565	340 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	PTPA	Q15257	358 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	TMEM132A	Q24JP5	1023 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	ZNF423	Q2M1K9	1284 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	CTXN3	Q4LDR2	81 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	TRIM61	Q5EBN2	209 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	EARS2	Q5JPH6	523 aa	Known RBP	11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	PPP4R3A	Q6IN85	833 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	ZNF280D	Q6N043	979 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	SYT13	Q7L8C5	426 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	NOSTRIN	Q8IVI9	506 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	RPLP0P6	Q8NHW5	317 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	PIGK	Q92643	395 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	ACD	Q96AP0	544 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	CHFR	Q96EP1	664 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	ADPGK	Q9BRR6	497 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	NUSAP1	Q9BXS6	441 aa	Known RBP	11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	LRRC3	Q9BY71	257 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	TPSD1	Q9BZJ3	242 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	SCUBE2	Q9NQ36	999 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	PRMT7	Q9NVM4	692 aa	Predicted RBP	11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	RGL1	Q9NZL6	768 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	RAX	Q9Y2V3	346 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	PCNX2	A6NKB5	2137 aa		11.3	□□□□□ -0.6
RRP12-215	ENST00000622320	UPK3BL1	B0FP48	263 aa		11.29	□□□□□ -0.6
RRP12-215	ENST00000622320	UPK3BL2	E5RIL1	263 aa		11.29	□□□□□ -0.6
RRP12-215	ENST00000622320	TRDMT1	O14717	391 aa	Known RBP	11.29	□□□□□ -0.6
RRP12-215	ENST00000622320	ENG	P17813	658 aa		11.29	□□□□□ -0.6
RRP12-215	ENST00000622320	FAM193A	P78312	1265 aa		11.29	□□□□□ -0.6
RRP12-215	ENST00000622320	NR5A1	Q13285	461 aa		11.29	□□□□□ -0.6
RRP12-215	ENST00000622320	CUL4A	Q13619	759 aa		11.29	□□□□□ -0.6
RRP12-215	ENST00000622320	CTTN	Q14247	550 aa	Known RBP	11.29	□□□□□ -0.6
RRP12-215	ENST00000622320	EPHA7	Q15375	998 aa		11.29	□□□□□ -0.6
RRP12-215	ENST00000622320	GPR158	Q5T848	1215 aa		11.29	□□□□□ -0.6
RRP12-215	ENST00000622320	RNF19B	Q6ZMZ0	732 aa		11.29	□□□□□ -0.6
RRP12-215	ENST00000622320	FBXO18	Q8NFZ0	1043 aa		11.29	□□□□□ -0.6
RRP12-215	ENST00000622320	MDM1	Q8TC05	714 aa		11.29	□□□□□ -0.6
RRP12-215	ENST00000622320	DYDC2	Q96IM9	177 aa		11.29	□□□□□ -0.6
RRP12-215	ENST00000622320	DNAJC25	Q9H1X3	360 aa		11.29	□□□□□ -0.6
RRP12-215	ENST00000622320	ZSWIM4	Q9H7M6	989 aa		11.29	□□□□□ -0.6
RRP12-215	ENST00000622320	KCNMB3	Q9NPA1	279 aa		11.29	□□□□□ -0.6
RRP12-215	ENST00000622320	MAFF	Q9ULX9	164 aa		11.29	□□□□□ -0.6
RRP12-215	ENST00000622320	BPTF	Q12830	3046 aa		11.29	□□□□□ -0.6
RRP12-215	ENST00000622320	CELSR3	Q9NYQ7	3312 aa		11.28	□□□□□ -0.6
RRP12-215	ENST00000622320	BTBD18	B2RXH4	712 aa		11.28	□□□□□ -0.6
RRP12-215	ENST00000622320	PODXL	O00592	558 aa		11.28	□□□□□ -0.6
RRP12-215	ENST00000622320	DGAT1	O75907	488 aa		11.28	□□□□□ -0.6
RRP12-215	ENST00000622320	C1QL1	O75973	258 aa		11.28	□□□□□ -0.6
RRP12-215	ENST00000622320	KRT2	P35908	639 aa		11.28	□□□□□ -0.6
RRP12-215	ENST00000622320	SOX4	Q06945	474 aa	Predicted RBP	11.28	□□□□□ -0.6
RRP12-215	ENST00000622320	PLD1	Q13393	1074 aa		11.28	□□□□□ -0.6
RRP12-215	ENST00000622320	MRPL58	Q14197	206 aa	Known RBP	11.28	□□□□□ -0.6
RRP12-215	ENST00000622320	FAM187B	Q17R55	369 aa		11.28	□□□□□ -0.6
RRP12-215	ENST00000622320	INF2	Q27J81	1249 aa		11.28	□□□□□ -0.6
RRP12-215	ENST00000622320	FBXO43	Q4G163	708 aa		11.28	□□□□□ -0.6
RRP12-215	ENST00000622320	USP39	Q53GS9	565 aa	Known RBP	11.28	□□□□□ -0.6
RRP12-215	ENST00000622320	ARHGAP15	Q53QZ3	475 aa		11.28	□□□□□ -0.6
RRP12-215	ENST00000622320	EEF1DP3	Q658K8	133 aa		11.28	□□□□□ -0.6
RRP12-215	ENST00000622320	CDCA2	Q69YH5	1023 aa	Predicted RBP	11.28	□□□□□ -0.6
RRP12-215	ENST00000622320	NCAPH2	Q6IBW4	605 aa		11.28	□□□□□ -0.6
RRP12-215	ENST00000622320	ZBTB8OS	Q8IWT0	167 aa		11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms