RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 DDX20Q9UHI6 824 aaKnown RBP13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 ITGA11Q9UKX5 1188 aa13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 CNTN6Q9UQ52 1028 aa13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 NOC2LQ9Y3T9 749 aaKnown RBP13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 BRD2P25440 801 aaKnown RBP13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 PAFAH1B1P43034 410 aa13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 NSFP46459 744 aaKnown RBP13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 PTPN11Q06124 597 aaPredicted RBP13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 NFX1Q12986 1120 aaKnown RBP13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 ORC1Q13415 861 aa13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 WDR93Q6P2C0 686 aa13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 RNF180Q86T96 592 aa13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 FAM228AQ86W67 206 aa13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 CXorf38Q8TB03 319 aa13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 HNRNPLLQ8WVV9 542 aaKnown RBP13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 ZMAT2Q96NC0 199 aaKnown RBP13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 L1RE1Q9UN81 338 aa13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 TRPV2Q9Y5S1 764 aa13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 CITO14578 2027 aa13.54□□□□□ -0.24
TNFAIP3-209ENST00000619035 ERLIN1O75477 346 aa13.54□□□□□ -0.24
TNFAIP3-209ENST00000619035 KIF4AO95239 1232 aa13.54□□□□□ -0.24
TNFAIP3-209ENST00000619035 UNGP13051 313 aaPredicted RBP13.54□□□□□ -0.24
TNFAIP3-209ENST00000619035 ZNF132P52740 706 aa13.54□□□□□ -0.24
TNFAIP3-209ENST00000619035 PTGISQ16647 500 aa13.54□□□□□ -0.24
TNFAIP3-209ENST00000619035 ZNF572Q7Z3I7 529 aaPredicted RBP13.54□□□□□ -0.24
TNFAIP3-209ENST00000619035 ZNF606Q8WXB4 792 aa13.54□□□□□ -0.24
TNFAIP3-209ENST00000619035 CALR3Q96L12 384 aaKnown RBP13.54□□□□□ -0.24
TNFAIP3-209ENST00000619035 NUP85Q9BW27 656 aa13.54□□□□□ -0.24
TNFAIP3-209ENST00000619035 CNOT8Q9UFF9 292 aaKnown RBP13.54□□□□□ -0.24
TNFAIP3-209ENST00000619035 TUBGCP4Q9UGJ1 667 aa13.54□□□□□ -0.24
TNFAIP3-209ENST00000619035 DERAQ9Y315 318 aa13.54□□□□□ -0.24
TNFAIP3-209ENST00000619035 POLR3GO15318 223 aaPredicted RBP13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 RPS6KA5O75582 802 aa13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 CD19P15391 556 aa13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 ATICP31939 592 aa13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 THPOP40225 353 aa13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 YWHAEP62258 255 aaKnown RBP13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 RBP5P82980 135 aa13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 CFAP221Q4G0U5 840 aa13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 UBXN11Q5T124 520 aa13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 SERINC5Q86VE9 423 aa13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 MMGT1Q8N4V1 131 aa13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 C18orf25Q96B23 403 aaPredicted RBP13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 TSEN34Q9BSV6 310 aaKnown RBP13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 SDCBP2Q9H190 292 aa13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 RNF39Q9H2S5 420 aa13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 FAM124BQ9H5Z6 455 aaPredicted RBP13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 GTF3C4Q9UKN8 822 aa13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 AMFRQ9UKV5 643 aa13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 NOD1Q9Y239 953 aa13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 GRIN2DO15399 1336 aa13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 MOXD2PA6NHM9 499 aa13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 MAP2K7O14733 419 aa13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 CYP1A1P04798 512 aaPredicted RBP13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 INHAP05111 366 aa13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 P4HA1P13674 534 aa13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 TNNC1P63316 161 aa13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 SMC1AQ14683 1233 aaKnown RBP13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 MESDQ14696 234 aa13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 SLFN11Q7Z7L1 901 aa13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 NT5DC3Q86UY8 548 aa13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 ZNF564Q8TBZ8 553 aaPredicted RBP13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 ZNF296Q8WUU4 475 aaPredicted RBP13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 BTBD6Q96KE9 485 aa13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 C11orf70Q9BRQ4 267 aa13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 BCO2Q9BYV7 579 aa13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 IPPQ9Y573 584 aa13.53□□□□□ -0.24
TNFAIP3-209ENST00000619035 ZSCAN5CA6NGD5 496 aaPredicted RBP13.52□□□□□ -0.24
TNFAIP3-209ENST00000619035 CEP104O60308 925 aa13.52□□□□□ -0.24
TNFAIP3-209ENST00000619035 CHRNA1P02708 482 aa13.52□□□□□ -0.24
TNFAIP3-209ENST00000619035 CYP1A2P05177 515 aa13.52□□□□□ -0.24
TNFAIP3-209ENST00000619035 TNNT3P45378 269 aaPredicted RBP13.52□□□□□ -0.24
TNFAIP3-209ENST00000619035 NOMO3P69849 1222 aa13.52□□□□□ -0.24
TNFAIP3-209ENST00000619035 CENPCQ03188 943 aa13.52□□□□□ -0.24
TNFAIP3-209ENST00000619035 CASP8Q14790 479 aa13.52□□□□□ -0.24
TNFAIP3-209ENST00000619035 LLGL2Q6P1M3 1020 aa13.52□□□□□ -0.24
TNFAIP3-209ENST00000619035 MCOLN2Q8IZK6 566 aa13.52□□□□□ -0.24
TNFAIP3-209ENST00000619035 HMGXB4Q9UGU5 601 aa13.52□□□□□ -0.24
TNFAIP3-209ENST00000619035 ST3GAL5Q9UNP4 418 aa13.52□□□□□ -0.24
TNFAIP3-209ENST00000619035 TARSL2A2RTX5 802 aaKnown RBP13.52□□□□□ -0.25
TNFAIP3-209ENST00000619035 H3BQF6 201 aa13.52□□□□□ -0.25
TNFAIP3-209ENST00000619035 PPEF2O14830 753 aa13.52□□□□□ -0.25
TNFAIP3-209ENST00000619035 IBSPP21815 317 aaPredicted RBP13.52□□□□□ -0.25
TNFAIP3-209ENST00000619035 RRM1P23921 792 aa13.52□□□□□ -0.25
TNFAIP3-209ENST00000619035 ACLYP53396 1101 aa13.52□□□□□ -0.25
TNFAIP3-209ENST00000619035 MYO1EQ12965 1108 aa13.52□□□□□ -0.25
TNFAIP3-209ENST00000619035 ITGA7Q13683 1181 aa13.52□□□□□ -0.25
TNFAIP3-209ENST00000619035 TRIM72Q6ZMU5 477 aa13.52□□□□□ -0.25
TNFAIP3-209ENST00000619035 HDXQ7Z353 690 aa13.52□□□□□ -0.25
TNFAIP3-209ENST00000619035 BEST2Q8NFU1 509 aa13.52□□□□□ -0.25
TNFAIP3-209ENST00000619035 TFAP2BQ92481 460 aa13.52□□□□□ -0.25
TNFAIP3-209ENST00000619035 KRT12Q99456 494 aa13.52□□□□□ -0.25
TNFAIP3-209ENST00000619035 SEZ6LQ9BYH1 1024 aa13.52□□□□□ -0.25
TNFAIP3-209ENST00000619035 SENP6Q9GZR1 1112 aaPredicted RBP13.52□□□□□ -0.25
TNFAIP3-209ENST00000619035 VRTNQ9H8Y1 702 aa13.52□□□□□ -0.25
TNFAIP3-209ENST00000619035 TRMT13Q9NUP7 481 aaKnown RBP13.52□□□□□ -0.25
TNFAIP3-209ENST00000619035 CNTN3Q9P232 1028 aa13.52□□□□□ -0.25
TNFAIP3-209ENST00000619035 RALGAPA2Q2PPJ7 1873 aa13.52□□□□□ -0.25
TNFAIP3-209ENST00000619035 TLR3O15455 904 aaKnown RBP13.51□□□□□ -0.25
TNFAIP3-209ENST00000619035 ATP8B1O43520 1251 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms