RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 POC1B-GALNT4F8VUJ3 575 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 UBOX5O94941 541 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 CAMTA2O94983 1202 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 NPEPPSP55786 919 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 ARPC4P59998 168 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 KCNH2Q12809 1159 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 RFWD3Q6PCD5 774 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 SYTL5Q8TDW5 730 aaPredicted RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 THAP9Q9H5L6 903 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 DCTN4Q9UJW0 460 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 AP1G2O75843 785 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 SLITRK3O94933 977 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 CHEK2O96017 543 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 NCF2P19878 526 aaPredicted RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 PSMC2P35998 433 aaKnown RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 ABL2P42684 1182 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 SLC34A1Q06495 639 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 MAPRE2Q15555 327 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 KLHL38Q2WGJ6 581 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 DCUN1D2Q6PH85 259 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 KLHL31Q9H511 634 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 KLHL11Q9NVR0 708 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 KIF17Q9P2E2 1029 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 ALG6Q9Y672 507 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 RPL22P35268 128 aaKnown RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 TOP3AQ13472 1001 aaPredicted RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 SPDYE1Q8NFV5 336 aaPredicted RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 AVENQ9NQS1 362 aaPredicted RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 DNAJB4Q9UDY4 337 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 ANO9A1A5B4 782 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 AKAP3O75969 853 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 BMP3P12645 472 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 NUP62P37198 522 aaPredicted RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 CRKLP46109 303 aaKnown RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 GAD2Q05329 585 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 FOXD4Q12950 439 aaPredicted RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 MKNK1Q9BUB5 465 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 GDF3Q9NR23 364 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 NMRK1Q9NWW6 199 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 ATXN10Q9UBB4 475 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 NR1H2P55055 460 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 C12orf60Q5U649 245 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 CCSAPQ6IQ19 270 aaPredicted RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 TRIM69Q86WT6 500 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 PNPLA1Q8N8W4 532 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 CEP70Q8NHQ1 597 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 ACAD8Q9UKU7 415 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 TMED5Q9Y3A6 229 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 SPAG6O75602 509 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 FESP07332 822 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 PRIM2P49643 509 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 SLC29A2Q14542 456 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 KRT73Q86Y46 540 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 hCG_2014768A0A024R1R8 64 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 TAP1Q03518 808 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 ANKMY2Q8IV38 441 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 WNT8AQ9H1J5 351 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 JMJD4Q9H9V9 463 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 LRCH1Q9Y2L9 728 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 FSCN2O14926 492 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 KIAA0895Q8NCT3 520 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 PAIP1Q9H074 479 aaKnown RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 RAD54BQ9Y620 910 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 PITPNM2Q9BZ72 1349 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 LZTS3O60299 673 aaPredicted RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 APOA4P06727 396 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 TAC1P20366 129 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 PRKAA2P54646 552 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 RAD23BP54727 409 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 SFR1Q86XK3 245 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 VGLL2Q8N8G2 317 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 EYA3Q99504 573 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 TPRKBQ9Y3C4 175 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 ATP10DQ9P241 1426 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 SOX11P35716 441 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 ASTE1Q2TB18 679 aaPredicted RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 CAMK1DQ8IU85 385 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 ZNF398Q8TD17 642 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 PBXIP1Q96AQ6 731 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 CGREF1Q99674 301 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 ARL8BQ9NVJ2 186 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 H2AFY2Q9P0M6 372 aaPredicted RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 MAD2L2Q9UI95 211 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 BFSP2Q13515 415 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 PUM3Q15397 648 aaKnown RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 MAB21L3Q8N8X9 362 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 PAGR1Q9BTK6 254 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 ASPSCR1Q9BZE9 553 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 SHCBP1LQ9BZQ2 653 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 CETPP11597 493 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 PIK3R1P27986 724 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 SMARCA1P28370 1054 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 RPS6KA3P51812 740 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 NRLP54845 237 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 TNFAIP8L3Q5GJ75 292 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 C6orf89Q6UWU4 347 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 COL23A1Q86Y22 540 aaPredicted RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 TP53INP1Q96A56 240 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 ZNF556Q9HAH1 456 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 CDY2AQ9Y6F7 541 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms