RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 MCL1Q07820 350 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 KHDC1Q4VXA5 237 aaKnown RBP16.45■□□□□ 0.22
GPN1-212ENST00000616939 LRRC74BQ6ZQY2 392 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 MON1BQ7L1V2 547 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 HAUS6Q7Z4H7 955 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 USP37Q86T82 979 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 ZNF276Q8N554 614 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 ALLCQ8N6M5 410 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.45■□□□□ 0.22
GPN1-212ENST00000616939 RBM41Q96IZ5 413 aaKnown RBP16.45■□□□□ 0.22
GPN1-212ENST00000616939 MFSD14AQ96MC6 490 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 NR1H4Q96RI1 486 aaPredicted RBP16.45■□□□□ 0.22
GPN1-212ENST00000616939 MRIQ9BWK5 157 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 DLGAP2Q9P1A6 1054 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 PRR12Q9ULL5 1215 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 BCS1LQ9Y276 419 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 MTO1Q9Y2Z2 717 aaKnown RBP16.45■□□□□ 0.22
GPN1-212ENST00000616939 ZNF646O15015 1829 aaPredicted RBP16.45■□□□□ 0.22
GPN1-212ENST00000616939 POC1B-GALNT4F8VUJ3 575 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 RPS6KA3P51812 740 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 NFIAQ12857 509 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 IKQ13123 557 aaPredicted RBP16.45■□□□□ 0.22
GPN1-212ENST00000616939 RCN1Q15293 331 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 SNRNP35Q16560 246 aaKnown RBP16.45■□□□□ 0.22
GPN1-212ENST00000616939 AOC3Q16853 763 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 SLC5A9Q2M3M2 681 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 GNPTABQ3T906 1256 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 RFWD3Q6PCD5 774 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 CENPUQ71F23 418 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 MTDHQ86UE4 582 aaKnown RBP16.45■□□□□ 0.22
GPN1-212ENST00000616939 CHSY1Q86X52 802 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 C4orf33Q8N1A6 199 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 ARHGAP24Q8N264 748 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 PPFIBP2Q8ND30 876 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 SKA1Q96BD8 255 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 FBXL18Q96ME1 805 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 IDI2Q9BXS1 227 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 RAB20Q9NX57 234 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 DDX43Q9NXZ2 648 aaKnown RBP16.45■□□□□ 0.22
GPN1-212ENST00000616939 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.45■□□□□ 0.22
GPN1-212ENST00000616939 COL2A1P02458 1487 aaPredicted RBP16.44■□□□□ 0.22
GPN1-212ENST00000616939 P4HBP07237 508 aaKnown RBP16.44■□□□□ 0.22
GPN1-212ENST00000616939 FGFR1P11362 822 aa16.44■□□□□ 0.22
GPN1-212ENST00000616939 RFC5P40937 340 aa16.44■□□□□ 0.22
GPN1-212ENST00000616939 GEMIN4P57678 1058 aaKnown RBP16.44■□□□□ 0.22
GPN1-212ENST00000616939 DYNC1I2Q13409 638 aaKnown RBP16.44■□□□□ 0.22
GPN1-212ENST00000616939 LLGL1Q15334 1064 aa16.44■□□□□ 0.22
GPN1-212ENST00000616939 MAPK6Q16659 721 aa16.44■□□□□ 0.22
GPN1-212ENST00000616939 RNASEH2BQ5TBB1 312 aaKnown RBP16.44■□□□□ 0.22
GPN1-212ENST00000616939 GSTA5Q7RTV2 222 aa16.44■□□□□ 0.22
GPN1-212ENST00000616939 AMIGO3Q86WK7 504 aa16.44■□□□□ 0.22
GPN1-212ENST00000616939 SP8Q8IXZ3 490 aa16.44■□□□□ 0.22
GPN1-212ENST00000616939 RCOR2Q8IZ40 523 aa16.44■□□□□ 0.22
GPN1-212ENST00000616939 ARHGAP18Q8N392 663 aa16.44■□□□□ 0.22
GPN1-212ENST00000616939 GATA6Q92908 595 aa16.44■□□□□ 0.22
GPN1-212ENST00000616939 MAK16Q9BXY0 300 aaKnown RBP16.44■□□□□ 0.22
GPN1-212ENST00000616939 TRIM55Q9BYV6 548 aa16.44■□□□□ 0.22
GPN1-212ENST00000616939 MRPL47Q9HD33 250 aaKnown RBP16.44■□□□□ 0.22
GPN1-212ENST00000616939 NPHS2Q9NP85 383 aa16.44■□□□□ 0.22
GPN1-212ENST00000616939 SCINQ9Y6U3 715 aa16.44■□□□□ 0.22
GPN1-212ENST00000616939 UBR3Q6ZT12 1888 aa16.43■□□□□ 0.22
GPN1-212ENST00000616939 ATP9AO75110 1047 aa16.43■□□□□ 0.22
GPN1-212ENST00000616939 PHBP35232 272 aa16.43■□□□□ 0.22
GPN1-212ENST00000616939 RAP1GDS1P52306 607 aa16.43■□□□□ 0.22
GPN1-212ENST00000616939 TAS2R40P59535 323 aa16.43■□□□□ 0.22
GPN1-212ENST00000616939 CDK16Q00536 496 aa16.43■□□□□ 0.22
GPN1-212ENST00000616939 RCN2Q14257 317 aa16.43■□□□□ 0.22
GPN1-212ENST00000616939 KPNB1Q14974 876 aaKnown RBP16.43■□□□□ 0.22
GPN1-212ENST00000616939 ACSBG2Q5FVE4 666 aa16.43■□□□□ 0.22
GPN1-212ENST00000616939 TRAPPC3LQ5T215 181 aa16.43■□□□□ 0.22
GPN1-212ENST00000616939 DAB2IPQ5VWQ8 1189 aa16.43■□□□□ 0.22
GPN1-212ENST00000616939 ADGRD1Q6QNK2 874 aa16.43■□□□□ 0.22
GPN1-212ENST00000616939 NIPA1Q7RTP0 329 aa16.43■□□□□ 0.22
GPN1-212ENST00000616939 ZSWIM2Q8NEG5 633 aa16.43■□□□□ 0.22
GPN1-212ENST00000616939 MZB1Q8WU39 189 aa16.43■□□□□ 0.22
GPN1-212ENST00000616939 NRG4Q8WWG1 115 aa16.43■□□□□ 0.22
GPN1-212ENST00000616939 SCG3Q8WXD2 468 aaKnown RBP16.43■□□□□ 0.22
GPN1-212ENST00000616939 ZDHHC15Q96MV8 337 aa16.43■□□□□ 0.22
GPN1-212ENST00000616939 HEMGNQ9BXL5 484 aa16.43■□□□□ 0.22
GPN1-212ENST00000616939 DEFB129Q9H1M3 183 aa16.43■□□□□ 0.22
GPN1-212ENST00000616939 VPS37BQ9H9H4 285 aa16.43■□□□□ 0.22
GPN1-212ENST00000616939 PCDH9Q9HC56 1237 aa16.43■□□□□ 0.22
GPN1-212ENST00000616939 ARL8BQ9NVJ2 186 aa16.43■□□□□ 0.22
GPN1-212ENST00000616939 CCNL1Q9UK58 526 aaPredicted RBP16.43■□□□□ 0.22
GPN1-212ENST00000616939 POLIQ9UNA4 740 aa16.43■□□□□ 0.22
GPN1-212ENST00000616939 PCDHB2Q9Y5E7 798 aa16.43■□□□□ 0.22
GPN1-212ENST00000616939 F8W8V4 182 aa16.42■□□□□ 0.22
GPN1-212ENST00000616939 PLSCR1O15162 318 aa16.42■□□□□ 0.22
GPN1-212ENST00000616939 MAP3K13O43283 966 aa16.42■□□□□ 0.22
GPN1-212ENST00000616939 AP1G2O75843 785 aa16.42■□□□□ 0.22
GPN1-212ENST00000616939 TJP3O95049 919 aa16.42■□□□□ 0.22
GPN1-212ENST00000616939 ARP10275 920 aa16.42■□□□□ 0.22
GPN1-212ENST00000616939 NSFP46459 744 aaKnown RBP16.42■□□□□ 0.22
GPN1-212ENST00000616939 RARRES1P49788 294 aa16.42■□□□□ 0.22
GPN1-212ENST00000616939 ABCB5Q2M3G0 1257 aa16.42■□□□□ 0.22
GPN1-212ENST00000616939 KLHL38Q2WGJ6 581 aa16.42■□□□□ 0.22
GPN1-212ENST00000616939 PLEKHG4Q58EX7 1191 aa16.42■□□□□ 0.22
GPN1-212ENST00000616939 LRRC38Q5VT99 294 aa16.42■□□□□ 0.22
GPN1-212ENST00000616939 PLEKHA7Q6IQ23 1121 aa16.42■□□□□ 0.22
GPN1-212ENST00000616939 SLC30A10Q6XR72 485 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms