RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 ZRSR2Q15696 482 aaKnown RBP13.9□□□□□ -0.18
MSH6-214ENST00000616033 ALYREFQ86V81 257 aaKnown RBP13.9□□□□□ -0.18
MSH6-214ENST00000616033 GALNT15Q8N3T1 639 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 FBXO27Q8NI29 283 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 LENG9Q96B70 501 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 ZNF395Q9H8N7 513 aaPredicted RBP13.9□□□□□ -0.18
MSH6-214ENST00000616033 HSPBP1Q9NZL4 362 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 PPARGC1AQ9UBK2 798 aaKnown RBP13.9□□□□□ -0.18
MSH6-214ENST00000616033 GGA1Q9UJY5 639 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 MEI4A8MW99 385 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 FAM163BP0C2L3 166 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 FOXR2Q6PJQ5 311 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 ANKS1BQ7Z6G8 1248 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 KBTBD2Q8IY47 623 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 USP6NLQ92738 828 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 PTPRN2Q92932 1015 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 ERLEC1Q96DZ1 483 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 RILPQ96NA2 401 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 FAM111AQ96PZ2 611 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 SMCHD1A6NHR9 2005 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 FAM237BA0A1B0GVD1 139 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 GSC2O15499 205 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 CCDC22O60826 627 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 PSMG1O95456 288 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 CFHP08603 1231 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 BGNP21810 368 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 SMARCA1P28370 1054 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 SHMT1P34896 483 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 CCNFP41002 786 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 TMED1Q13445 227 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 MOGSQ13724 837 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 ZNF394Q53GI3 561 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 SPOPLQ6IQ16 392 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 RHBDF2Q6PJF5 856 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 CEP128Q6ZU80 1094 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 CTAGE3PQ8IX95 158 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 NMD3Q96D46 503 aaKnown RBP13.89□□□□□ -0.19
MSH6-214ENST00000616033 LRCH1Q9Y2L9 728 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 F5H6K3 240 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 LIN7AO14910 233 aaPredicted RBP13.89□□□□□ -0.19
MSH6-214ENST00000616033 SUPT3HO75486 399 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 ARP10275 920 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 PADI6Q6TGC4 694 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 LMO3Q8TAP4 145 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 CD101Q93033 1021 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 ZNF577Q9BSK1 485 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 WDR18Q9BV38 432 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 TMEM120AQ9BXJ8 343 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 MOV10L1Q9BXT6 1211 aaKnown RBP13.89□□□□□ -0.19
MSH6-214ENST00000616033 TRIM55Q9BYV6 548 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 OLFML3Q9NRN5 406 aa13.89□□□□□ -0.19
MSH6-214ENST00000616033 FRMPD4Q14CM0 1322 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 ADGRA3Q8IWK6 1321 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 ROBO3Q96MS0 1386 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 FSCN2O14926 492 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 MYL2P10916 166 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 HARSP12081 509 aaKnown RBP13.88□□□□□ -0.19
MSH6-214ENST00000616033 ACADSP16219 412 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 EPHB1P54762 984 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 MFAP3P55082 362 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 ALCAMQ13740 583 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 FAM102BQ5T8I3 360 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 MAIP1Q8WWC4 291 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 PSPC1Q8WXF1 523 aaKnown RBP13.88□□□□□ -0.19
MSH6-214ENST00000616033 BTBD10Q9BSF8 475 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 ANKFY1Q9P2R3 1169 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 TCEAL9Q9UHQ7 104 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 GTF3C4Q9UKN8 822 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 ARAP2Q8WZ64 1704 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 SERPINB2P05120 415 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 ADRB2P07550 413 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 SKIV2L2P42285 1042 aaKnown RBP13.88□□□□□ -0.19
MSH6-214ENST00000616033 NSFP46459 744 aaKnown RBP13.88□□□□□ -0.19
MSH6-214ENST00000616033 ALDH18A1P54886 795 aaKnown RBP13.88□□□□□ -0.19
MSH6-214ENST00000616033 SLC34A1Q06495 639 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 MCL1Q07820 350 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 PTK6Q13882 451 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 PDK4Q16654 411 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 RHPN2Q8IUC4 686 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 PALM2Q8IXS6 379 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 XXYLT1Q8NBI6 393 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 SHKBP1Q8TBC3 707 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 INPP5DQ92835 1189 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 TUBGCP5Q96RT8 1024 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 MECRQ9BV79 373 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 TSSK1BQ9BXA7 367 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 VAV3Q9UKW4 847 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 ZNF711Q9Y462 761 aa13.88□□□□□ -0.19
MSH6-214ENST00000616033 TJP3O95049 919 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 TM4SF1P30408 202 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 CYP1B1Q16678 543 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 SMTNL2Q2TAL5 461 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 WASHC2DQ5SRD0 308 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 PYROXD1Q8WU10 500 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 C7orf43Q8WVR3 580 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 NSL1Q96IY1 281 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 NAP1L4Q99733 375 aaKnown RBP13.87□□□□□ -0.19
MSH6-214ENST00000616033 SLC13A1Q9BZW2 595 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 MANSC1Q9H8J5 431 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 CYP4F11Q9HBI6 524 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms