RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 KLRG1Q96E93 195 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 FRMD8Q9BZ67 464 aaPredicted RBP10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 PHF20L1A8MW92 1017 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 PIK3CDO00329 1044 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 SRGAP2O75044 1071 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 ATP2C2O75185 946 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 LSM8O95777 96 aaKnown RBP10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 LGALS2P05162 132 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 ZNF286BP0CG31 522 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 INSRRP14616 1297 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 TRIM67Q6ZTA4 783 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 FBXO28Q9NVF7 368 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 OGFRQ9NZT2 677 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 RSPH14Q9UHP6 348 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 FTLP02792 175 aaPredicted RBP10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 CDH6P55285 790 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 TROAPQ12815 778 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 ZNF467Q7Z7K2 595 aaPredicted RBP10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 ULK4Q96C45 1275 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 HINFPQ9BQA5 517 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 ELOVL4Q9GZR5 314 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 MED4Q9NPJ6 270 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 EPS15L1Q9UBC2 864 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 METTL3Q86U44 580 aaKnown RBP10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 CLEC10AQ8IUN9 316 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 TRIM48Q8IWZ4 208 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 TRPM4Q8TD43 1214 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 KDM4CQ9H3R0 1056 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 VCX3AQ9NNX9 186 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 MRGBPQ9NV56 204 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 FAM198AQ9UFP1 575 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 SLC30A1Q9Y6M5 507 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 ANXA9O76027 345 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 ADH1AP07327 375 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 RFC2P35250 354 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 LRRC43Q8N309 656 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 ABHD10Q9NUJ1 306 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 DNPEPQ9ULA0 475 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 ORC6Q9Y5N6 252 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 PIK3C2AO00443 1686 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 AP1G2O75843 785 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 B3GAT3O94766 335 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 CUL2Q13617 745 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 IMPG1Q17R60 797 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 C6orf118Q5T5N4 469 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 ANKRD42Q8N9B4 389 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 SETD4Q9NVD3 440 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 HACD3Q9P035 362 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 INTUQ9ULD6 942 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 ATP8B1O43520 1251 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 PDGFRAP16234 1089 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 DBN1Q16643 649 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 FAM71BQ8TC56 605 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 DNAJB3Q8WWF6 145 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 DESI2Q9BSY9 194 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 NDFIP2Q9NV92 336 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 PKP3Q9Y446 797 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 LTN1O94822 1766 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 POC1B-GALNT4F8VUJ3 575 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 GUCY1A2P33402 732 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 CTNNB1P35222 781 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 RGS4P49798 205 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 GEMP55040 296 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 DHX34Q14147 1143 aaKnown RBP10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 RAB30Q15771 203 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 NBPF20Q3BBV1 942 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 C3orf67Q6ZVT6 689 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 ADSSL1Q8N142 457 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 KCNB2Q92953 911 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 FOXP3Q9BZS1 431 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 SUN2Q9UH99 717 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 NCAM2O15394 837 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 SLC20A1Q8WUM9 679 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 LRRC37BQ96QE4 947 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 HEY1Q9Y5J3 304 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 SF3B1O75533 1304 aaKnown RBP eCLIP10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 NPHP3-ACAD11A0A0J9YXS1 232 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 CASQ2O14958 399 aaPredicted RBP10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 VTNP04004 478 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 MYBP10242 640 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 RPL9P32969 192 aaKnown RBP10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 CCT5P48643 541 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 GUCY2FP51841 1108 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 CRYBB1P53674 252 aaPredicted RBP10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 GUCY2DQ02846 1103 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 BST2Q10589 180 aaKnown RBP10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 LY6KQ17RY6 165 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 BBS9Q3SYG4 887 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 PSRC1Q6PGN9 363 aaPredicted RBP10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 GPIHBP1Q8IV16 184 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 SMARCD1Q96GM5 515 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 Q9H521 79 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 SYNDIG1Q9H7V2 258 aa10.23□□□□□ -0.77
TNFRSF9-204ENST00000615230 EXOC1LA0A1B0GW35 172 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 NFIBO00712 420 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 C2CD2LO14523 706 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 CAND2O75155 1236 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms