RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 CRYZL1O95825 349 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 HALP42357 657 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 ABCE1P61221 599 aaKnown RBP5.17□□□□□ -1.58
VPS13D-213ENST00000613099 TRADDQ15628 312 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 C4orf22Q6V702 233 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 PJA1Q8NG27 643 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 DDX3XO00571 662 aaKnown RBP eCLIP5.17□□□□□ -1.582e-7■■□□□ 13.6
VPS13D-213ENST00000613099 OXSR1O95747 527 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-213ENST00000613099 KCNMA1Q12791 1236 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 MYO1HQ8N1T3 1032 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 C8orf58Q8NAV2 365 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 C19orf18Q8NEA5 215 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 GLMNQ92990 594 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 SAYSD1Q9NPB0 183 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 PICK1Q9NRD5 415 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 DNAJC11Q9NVH1 559 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 SLC4A4Q9Y6R1 1079 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 DCUN1D2Q6PH85 259 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 RAD9BQ6WBX8 426 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 BARGINQ6ZT62 677 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 CIDECQ96AQ7 238 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-213ENST00000613099 AGBL1Q96MI9 1066 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 UNKQ9C0B0 810 aaKnown RBP5.17□□□□□ -1.58
VPS13D-213ENST00000613099 AASDHPPTQ9NRN7 309 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-213ENST00000613099 CES2O00748 559 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 MAP3K13O43283 966 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 THRAP10827 490 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 TCF7P36402 384 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-213ENST00000613099 TRIM23P36406 574 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 STX5Q13190 355 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 MTF1Q14872 753 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 ALKBH5Q6P6C2 394 aaKnown RBP5.17□□□□□ -1.58
VPS13D-213ENST00000613099 ADAT2Q7Z6V5 191 aaKnown RBP5.17□□□□□ -1.58
VPS13D-213ENST00000613099 USP13Q92995 863 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-213ENST00000613099 MED30Q96HR3 178 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 TMEM98Q9Y2Y6 226 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 GPATCH8Q9UKJ3 1502 aaKnown RBP5.17□□□□□ -1.58
VPS13D-213ENST00000613099 SLC12A2P55011 1212 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 PLS1Q14651 629 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 RTKN2Q8IZC4 609 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 WNT8AQ9H1J5 351 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 SERHL2Q9H4I8 314 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 SCN3BQ9NY72 215 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 CEP72Q9P209 647 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 ADD3Q9UEY8 706 aaKnown RBP5.17□□□□□ -1.58
VPS13D-213ENST00000613099 ATP10DQ9P241 1426 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 MYOM1P52179 1685 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 DNM1LO00429 736 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 KPNA2P52292 529 aaKnown RBP5.17□□□□□ -1.58
VPS13D-213ENST00000613099 CYP4A11Q02928 519 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 CYP4A22Q5TCH4 519 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 SCYL1Q96KG9 808 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 PSTPIP2Q9H939 334 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 SSU72P8A0A1W2PR75 194 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 CCDC78A2IDD5 438 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 A6NHS1 94 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 TMEM114B3SHH9 223 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 GJC1P36383 396 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 SQLEQ14534 574 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 UMODL1Q5DID0 1318 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 PRCCQ92733 491 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-213ENST00000613099 PCDH12Q9NPG4 1184 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 BAIAP2Q9UQB8 552 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 PPME1Q9Y570 386 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 NEXMIFQ5QGS0 1516 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 PDPK1O15530 556 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 RAD51CO43502 376 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 SNX3O60493 162 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 CCNKO75909 580 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 ALDH1A3P47895 512 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 TRAF2Q12933 501 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 CAVIN4Q5BKX8 364 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 DHDDSQ86SQ9 333 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 CSRNP1Q96S65 589 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 PHF8Q9UPP1 1060 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 MAP1BP46821 2468 aaKnown RBP5.17□□□□□ -1.58
VPS13D-213ENST00000613099 TOP3AQ13472 1001 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-213ENST00000613099 HERC4Q5GLZ8 1057 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-213ENST00000613099 C1QTNF12Q5T7M4 302 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 CNOT6LQ96LI5 555 aaKnown RBP5.17□□□□□ -1.58
VPS13D-213ENST00000613099 AK8Q96MA6 479 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 MYLK2Q9H1R3 596 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 VPS33BQ9H267 617 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 PSMC3IPQ9P2W1 217 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-213ENST00000613099 HEY2Q9UBP5 337 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 CD97P48960 835 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 PPP4R3CPQ6ZMV5 832 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 DENND6AQ8IWF6 608 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 VTA1Q9NP79 307 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 V9GY48 417 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-213ENST00000613099 ILVBLA1L0T0 632 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 CCNA2P20248 432 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 TAF12Q16514 161 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 ZNF829Q3KNS6 432 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-213ENST00000613099 SLC9A4Q6AI14 798 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 TAF2Q6P1X5 1199 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 ANGPTL8Q6UXH0 198 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 KLHL32Q96NJ5 620 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 SP140LQ9H930 580 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms