RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 TEX2Q8IWB9 1127 aa10.21□□□□□ -0.77
CTCFL-220ENST00000608858 HDDC3Q8N4P3 179 aa10.21□□□□□ -0.77
CTCFL-220ENST00000608858 BPIFB1Q8TDL5 484 aa10.21□□□□□ -0.77
CTCFL-220ENST00000608858 VPS54Q9P1Q0 977 aa10.21□□□□□ -0.77
CTCFL-220ENST00000608858 STK24Q9Y6E0 443 aa10.21□□□□□ -0.77
CTCFL-220ENST00000608858 ACACAQ13085 2346 aa10.21□□□□□ -0.78
CTCFL-220ENST00000608858 LRRIQ4A6NIV6 560 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 TRDMT1O14717 391 aaKnown RBP10.2□□□□□ -0.78
CTCFL-220ENST00000608858 SGSM2O43147 1006 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 ARSAP15289 507 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 ARL2P36404 184 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 EPHA5P54756 1037 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 SEC13P55735 322 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 NLRP5P59047 1200 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 CYP4F8P98187 520 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 SOX4Q06945 474 aaPredicted RBP10.2□□□□□ -0.78
CTCFL-220ENST00000608858 RUNX3Q13761 415 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 PCBP1Q15365 356 aaKnown RBP eCLIP10.2□□□□□ -0.78
CTCFL-220ENST00000608858 C2orf27AQ580R0 203 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 EEF1DP3Q658K8 133 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 GAREM2Q75VX8 874 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 SYT13Q7L8C5 426 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 DNAJB7Q7Z6W7 309 aaPredicted RBP10.2□□□□□ -0.78
CTCFL-220ENST00000608858 TMC8Q8IU68 726 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 SMC5Q8IY18 1101 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 TMEM130Q8N3G9 435 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 CCDC33Q8N5R6 958 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 TSTD1Q8NFU3 115 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 ETNPPLQ8TBG4 499 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 PIP4K2CQ8TBX8 421 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 HNRNPABQ99729 332 aaKnown RBP10.2□□□□□ -0.78
CTCFL-220ENST00000608858 LXNQ9BS40 222 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 POLR3CQ9BUI4 534 aaPredicted RBP10.2□□□□□ -0.78
CTCFL-220ENST00000608858 CRISPLD1Q9H336 500 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 PDZD7Q9H5P4 517 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 POLD4Q9HCU8 107 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 GPRC5CQ9NQ84 441 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 HPS4Q9NQG7 708 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 THG1LQ9NWX6 298 aaKnown RBP10.2□□□□□ -0.78
CTCFL-220ENST00000608858 EBF1Q9UH73 591 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 PCDHB9Q9Y5E1 797 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 TIMM13Q9Y5L4 95 aaPredicted RBP10.2□□□□□ -0.78
CTCFL-220ENST00000608858 KALRNO60229 2985 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 UNC79Q9P2D8 2635 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 HECTD1Q9ULT8 2610 aa10.2□□□□□ -0.78
CTCFL-220ENST00000608858 APC2O95996 2303 aa10.19□□□□□ -0.78
CTCFL-220ENST00000608858 ESYT2A0FGR8 921 aa10.19□□□□□ -0.78
CTCFL-220ENST00000608858 H7C4K7 107 aa10.19□□□□□ -0.78
CTCFL-220ENST00000608858 SLC37A4O43826 429 aa10.19□□□□□ -0.78
CTCFL-220ENST00000608858 CD59P13987 128 aa10.19□□□□□ -0.78
CTCFL-220ENST00000608858 CPB1P15086 417 aa10.19□□□□□ -0.78
CTCFL-220ENST00000608858 ITPKAP23677 461 aa10.19□□□□□ -0.78
CTCFL-220ENST00000608858 GABRR2P28476 465 aa10.19□□□□□ -0.78
CTCFL-220ENST00000608858 EPHB3P54753 998 aa10.19□□□□□ -0.78
CTCFL-220ENST00000608858 OSTNP61366 133 aa10.19□□□□□ -0.78
CTCFL-220ENST00000608858 MRPL58Q14197 206 aaKnown RBP10.19□□□□□ -0.78
CTCFL-220ENST00000608858 PTPAQ15257 358 aa10.19□□□□□ -0.78
CTCFL-220ENST00000608858 ZNF423Q2M1K9 1284 aa10.19□□□□□ -0.78
CTCFL-220ENST00000608858 CREB3L3Q68CJ9 461 aa10.19□□□□□ -0.78
CTCFL-220ENST00000608858 TPGS2Q68CL5 300 aa10.19□□□□□ -0.78
CTCFL-220ENST00000608858 NCAPH2Q6IBW4 605 aa10.19□□□□□ -0.78
CTCFL-220ENST00000608858 SLCO6A1Q86UG4 719 aa10.19□□□□□ -0.78
CTCFL-220ENST00000608858 ZNF843Q8N446 348 aa10.19□□□□□ -0.78
CTCFL-220ENST00000608858 DAGLBQ8NCG7 672 aa10.19□□□□□ -0.78
CTCFL-220ENST00000608858 BICD2Q8TD16 824 aa10.19□□□□□ -0.78
CTCFL-220ENST00000608858 CCDC12Q8WUD4 166 aaPredicted RBP10.19□□□□□ -0.78
CTCFL-220ENST00000608858 EZH1Q92800 747 aaPredicted RBP10.19□□□□□ -0.78
CTCFL-220ENST00000608858 PPP1R10Q96QC0 940 aaKnown RBP10.19□□□□□ -0.78
CTCFL-220ENST00000608858 P2RY13Q9BPV8 354 aa10.19□□□□□ -0.78
CTCFL-220ENST00000608858 SLC46A2Q9BY10 475 aa10.19□□□□□ -0.78
CTCFL-220ENST00000608858 POLR3FQ9H1D9 316 aaPredicted RBP10.19□□□□□ -0.78
CTCFL-220ENST00000608858 DNAJC25Q9H1X3 360 aa10.19□□□□□ -0.78
CTCFL-220ENST00000608858 RWDD1Q9H446 243 aaPredicted RBP10.19□□□□□ -0.78
CTCFL-220ENST00000608858 AFF4Q9UHB7 1163 aaKnown RBP10.19□□□□□ -0.78
CTCFL-220ENST00000608858 DDX25Q9UHL0 483 aaKnown RBP10.19□□□□□ -0.78
CTCFL-220ENST00000608858 CCL26Q9Y258 94 aa10.19□□□□□ -0.78
CTCFL-220ENST00000608858 PI4KAP42356 2102 aa10.19□□□□□ -0.78
CTCFL-220ENST00000608858 TRIP11Q15643 1979 aa10.19□□□□□ -0.78
CTCFL-220ENST00000608858 CYP3A7-CYP3A51PA0A087WV96 503 aa10.18□□□□□ -0.78
CTCFL-220ENST00000608858 SMIM28A0A1B0GU29 152 aa10.18□□□□□ -0.78
CTCFL-220ENST00000608858 GOLGA8CPA6NN73 597 aa10.18□□□□□ -0.78
CTCFL-220ENST00000608858 TMEM189-UBE2V1I3L0A0 370 aa10.18□□□□□ -0.78
CTCFL-220ENST00000608858 J3QKU1 62 aa10.18□□□□□ -0.78
CTCFL-220ENST00000608858 MARCH6O60337 910 aa10.18□□□□□ -0.78
CTCFL-220ENST00000608858 DKC1O60832 514 aaKnown RBP eCLIP10.18□□□□□ -0.78
CTCFL-220ENST00000608858 OPHN1O60890 802 aa10.18□□□□□ -0.78
CTCFL-220ENST00000608858 VNN2O95498 520 aa10.18□□□□□ -0.78
CTCFL-220ENST00000608858 EDN1P05305 212 aa10.18□□□□□ -0.78
CTCFL-220ENST00000608858 FTH1P19P0C7X4 201 aa10.18□□□□□ -0.78
CTCFL-220ENST00000608858 CYP3A7P24462 503 aa10.18□□□□□ -0.78
CTCFL-220ENST00000608858 ITPKBP27987 946 aa10.18□□□□□ -0.78
CTCFL-220ENST00000608858 POU5F1BQ06416 359 aa10.18□□□□□ -0.78
CTCFL-220ENST00000608858 PRPF4BQ13523 1007 aaKnown RBP10.18□□□□□ -0.78
CTCFL-220ENST00000608858 LPCAT2Q7L5N7 544 aa10.18□□□□□ -0.78
CTCFL-220ENST00000608858 SYT12Q8IV01 421 aa10.18□□□□□ -0.78
CTCFL-220ENST00000608858 C4orf19Q8IY42 314 aa10.18□□□□□ -0.78
CTCFL-220ENST00000608858 LEMD2Q8NC56 503 aa10.18□□□□□ -0.78
CTCFL-220ENST00000608858 FNBP1Q96RU3 617 aa10.18□□□□□ -0.78
CTCFL-220ENST00000608858 UBL7Q96S82 380 aaPredicted RBP10.18□□□□□ -0.78
CTCFL-220ENST00000608858 FAM83CQ9BQN1 747 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms