RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 ALDH1A3P47895 512 aa16.34■□□□□ 0.21
SSBP4-214ENST00000607020 CACNB1Q02641 598 aaPredicted RBP16.34■□□□□ 0.21
SSBP4-214ENST00000607020 DUSP4Q13115 394 aa16.34■□□□□ 0.21
SSBP4-214ENST00000607020 MYBPC2Q14324 1141 aa16.34■□□□□ 0.21
SSBP4-214ENST00000607020 PTPAQ15257 358 aa16.34■□□□□ 0.21
SSBP4-214ENST00000607020 STXBP5Q5T5C0 1151 aa16.34■□□□□ 0.21
SSBP4-214ENST00000607020 HAUS3Q68CZ6 603 aa16.34■□□□□ 0.21
SSBP4-214ENST00000607020 CENPPQ6IPU0 288 aa16.34■□□□□ 0.21
SSBP4-214ENST00000607020 DNAJB7Q7Z6W7 309 aaPredicted RBP16.34■□□□□ 0.21
SSBP4-214ENST00000607020 KBTBD6Q86V97 674 aa16.34■□□□□ 0.21
SSBP4-214ENST00000607020 CAMKK1Q8N5S9 505 aa16.34■□□□□ 0.21
SSBP4-214ENST00000607020 PSMG2Q969U7 264 aa16.34■□□□□ 0.21
SSBP4-214ENST00000607020 TMEM209Q96SK2 561 aa16.34■□□□□ 0.21
SSBP4-214ENST00000607020 NTPCRQ9BSD7 190 aaKnown RBP16.34■□□□□ 0.21
SSBP4-214ENST00000607020 TCHPQ9BT92 498 aa16.34■□□□□ 0.21
SSBP4-214ENST00000607020 C17orf75Q9HAS0 396 aa16.34■□□□□ 0.21
SSBP4-214ENST00000607020 PLEKHA5Q9HAU0 1116 aa16.34■□□□□ 0.21
SSBP4-214ENST00000607020 VPS45Q9NRW7 570 aa16.34■□□□□ 0.21
SSBP4-214ENST00000607020 PEX3P56589 373 aa16.33■□□□□ 0.2
SSBP4-214ENST00000607020 ZBTB6Q15916 424 aa16.33■□□□□ 0.2
SSBP4-214ENST00000607020 ITPRIPL2Q3MIP1 535 aa16.33■□□□□ 0.2
SSBP4-214ENST00000607020 DAW1Q8N136 415 aa16.33■□□□□ 0.2
SSBP4-214ENST00000607020 KDF1Q8NAX2 398 aaPredicted RBP16.33■□□□□ 0.2
SSBP4-214ENST00000607020 NSUN7Q8NE18 718 aaKnown RBP16.33■□□□□ 0.2
SSBP4-214ENST00000607020 BPIFB1Q8TDL5 484 aa16.33■□□□□ 0.2
SSBP4-214ENST00000607020 ZFYVE19Q96K21 471 aa16.33■□□□□ 0.2
SSBP4-214ENST00000607020 TASP1Q9H6P5 420 aa16.33■□□□□ 0.2
SSBP4-214ENST00000607020 TOM1L1O75674 476 aa16.32■□□□□ 0.2
SSBP4-214ENST00000607020 TYMPP19971 482 aa16.32■□□□□ 0.2
SSBP4-214ENST00000607020 CYP3A5P20815 502 aa16.32■□□□□ 0.2
SSBP4-214ENST00000607020 CCT6AP40227 531 aaKnown RBP16.32■□□□□ 0.2
SSBP4-214ENST00000607020 MPLP40238 635 aa16.32■□□□□ 0.2
SSBP4-214ENST00000607020 FXR2P51116 673 aaKnown RBP eCLIP16.32■□□□□ 0.2
SSBP4-214ENST00000607020 DMP1Q13316 513 aaPredicted RBP16.32■□□□□ 0.2
SSBP4-214ENST00000607020 TRIM29Q14134 588 aa16.32■□□□□ 0.2
SSBP4-214ENST00000607020 PDIA5Q14554 519 aa16.32■□□□□ 0.2
SSBP4-214ENST00000607020 CCDC6Q16204 474 aa16.32■□□□□ 0.2
SSBP4-214ENST00000607020 ARHGAP15Q53QZ3 475 aa16.32■□□□□ 0.2
SSBP4-214ENST00000607020 TMEM196Q5HYL7 178 aa16.32■□□□□ 0.2
SSBP4-214ENST00000607020 GPR158Q5T848 1215 aa16.32■□□□□ 0.2
SSBP4-214ENST00000607020 ITIH5Q86UX2 942 aa16.32■□□□□ 0.2
SSBP4-214ENST00000607020 TTC8Q8TAM2 541 aa16.32■□□□□ 0.2
SSBP4-214ENST00000607020 GTF3C6Q969F1 213 aa16.32■□□□□ 0.2
SSBP4-214ENST00000607020 ATXN3LQ9H3M9 355 aa16.32■□□□□ 0.2
SSBP4-214ENST00000607020 SH2B1Q9NRF2 756 aaPredicted RBP16.32■□□□□ 0.2
SSBP4-214ENST00000607020 THG1LQ9NWX6 298 aaKnown RBP16.32■□□□□ 0.2
SSBP4-214ENST00000607020 ZMYM5Q9UJ78 669 aa16.32■□□□□ 0.2
SSBP4-214ENST00000607020 RALYQ9UKM9 306 aaKnown RBP16.32■□□□□ 0.2
SSBP4-214ENST00000607020 STK24Q9Y6E0 443 aa16.32■□□□□ 0.2
SSBP4-214ENST00000607020 BAHCC1Q9P281 2608 aa16.32■□□□□ 0.2
SSBP4-214ENST00000607020 TRDMT1O14717 391 aaKnown RBP16.31■□□□□ 0.2
SSBP4-214ENST00000607020 EIF5BO60841 1220 aaKnown RBP16.31■□□□□ 0.2
SSBP4-214ENST00000607020 OR4Q2P0C623 313 aa16.31■□□□□ 0.2
SSBP4-214ENST00000607020 PAX3P23760 479 aa16.31■□□□□ 0.2
SSBP4-214ENST00000607020 TNK2Q07912 1038 aa16.31■□□□□ 0.2
SSBP4-214ENST00000607020 GRSF1Q12849 480 aaKnown RBP eCLIP16.31■□□□□ 0.2
SSBP4-214ENST00000607020 ME3Q16798 604 aa16.31■□□□□ 0.2
SSBP4-214ENST00000607020 PLK5Q496M5 336 aa16.31■□□□□ 0.2
SSBP4-214ENST00000607020 PKN3Q6P5Z2 889 aa16.31■□□□□ 0.2
SSBP4-214ENST00000607020 USP37Q86T82 979 aa16.31■□□□□ 0.2
SSBP4-214ENST00000607020 GPIHBP1Q8IV16 184 aa16.31■□□□□ 0.2
SSBP4-214ENST00000607020 NECAB1Q8N987 351 aa16.31■□□□□ 0.2
SSBP4-214ENST00000607020 ATAD1Q8NBU5 361 aa16.31■□□□□ 0.2
SSBP4-214ENST00000607020 ZBTB45Q96K62 511 aaPredicted RBP16.31■□□□□ 0.2
SSBP4-214ENST00000607020 DRC1Q96MC2 740 aa16.31■□□□□ 0.2
SSBP4-214ENST00000607020 PGLYRP2Q96PD5 576 aa16.31■□□□□ 0.2
SSBP4-214ENST00000607020 TSPAN18Q96SJ8 248 aa16.31■□□□□ 0.2
SSBP4-214ENST00000607020 FAM83CQ9BQN1 747 aa16.31■□□□□ 0.2
SSBP4-214ENST00000607020 KMT5AQ9NQR1 393 aa16.31■□□□□ 0.2
SSBP4-214ENST00000607020 TUBGCP4Q9UGJ1 667 aa16.31■□□□□ 0.2
SSBP4-214ENST00000607020 KCNG1Q9UIX4 513 aa16.31■□□□□ 0.2
SSBP4-214ENST00000607020 SLC8A2Q9UPR5 921 aa16.31■□□□□ 0.2
SSBP4-214ENST00000607020 KIAA1024Q9UPX6 916 aa16.31■□□□□ 0.2
SSBP4-214ENST00000607020 WASF3Q9UPY6 502 aa16.31■□□□□ 0.2
SSBP4-214ENST00000607020 TIMM13Q9Y5L4 95 aaPredicted RBP16.31■□□□□ 0.2
SSBP4-214ENST00000607020 MTMR11A4FU01 709 aa16.3■□□□□ 0.2
SSBP4-214ENST00000607020 HIP1RO75146 1068 aa16.3■□□□□ 0.2
SSBP4-214ENST00000607020 PRAMEF12O95522 483 aa16.3■□□□□ 0.2
SSBP4-214ENST00000607020 CCDC192P0DO97 292 aa16.3■□□□□ 0.2
SSBP4-214ENST00000607020 GABRR2P28476 465 aa16.3■□□□□ 0.2
SSBP4-214ENST00000607020 PXNP49023 591 aaPredicted RBP16.3■□□□□ 0.2
SSBP4-214ENST00000607020 MCM2P49736 904 aa16.3■□□□□ 0.2
SSBP4-214ENST00000607020 MCL1Q07820 350 aa16.3■□□□□ 0.2
SSBP4-214ENST00000607020 MAPK7Q13164 816 aa16.3■□□□□ 0.2
SSBP4-214ENST00000607020 ZNF174Q15697 407 aa16.3■□□□□ 0.2
SSBP4-214ENST00000607020 RNF43Q68DV7 783 aa16.3■□□□□ 0.2
SSBP4-214ENST00000607020 FSTL4Q6MZW2 842 aa16.3■□□□□ 0.2
SSBP4-214ENST00000607020 ZPBP2Q6X784 338 aa16.3■□□□□ 0.2
SSBP4-214ENST00000607020 C4orf32Q8N8J7 132 aa16.3■□□□□ 0.2
SSBP4-214ENST00000607020 SPIRE2Q8WWL2 714 aa16.3■□□□□ 0.2
SSBP4-214ENST00000607020 TIPINQ9BVW5 301 aa16.3■□□□□ 0.2
SSBP4-214ENST00000607020 IL21Q9HBE4 155 aa16.3■□□□□ 0.2
SSBP4-214ENST00000607020 GKN1Q9NS71 199 aa16.3■□□□□ 0.2
SSBP4-214ENST00000607020 SLC27A5Q9Y2P5 690 aa16.3■□□□□ 0.2
SSBP4-214ENST00000607020 FRYQ5TBA9 3013 aa16.29■□□□□ 0.2
SSBP4-214ENST00000607020 TTC26A0AVF1 554 aa16.29■□□□□ 0.2
SSBP4-214ENST00000607020 CLTAP09496 248 aa16.29■□□□□ 0.2
SSBP4-214ENST00000607020 CDC25CP30307 473 aa16.29■□□□□ 0.2
SSBP4-214ENST00000607020 TUFMP49411 452 aaKnown RBP16.29■□□□□ 0.2
SSBP4-214ENST00000607020 ANAPC15P60006 121 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms