RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 LIN9Q5TKA1 542 aa11.54□□□□□ -0.56
TUBE1-210ENST00000604967 ZNF280DQ6N043 979 aa11.54□□□□□ -0.56
TUBE1-210ENST00000604967 BMP8AQ7Z5Y6 402 aa11.54□□□□□ -0.56
TUBE1-210ENST00000604967 NPAS3Q8IXF0 933 aa11.54□□□□□ -0.56
TUBE1-210ENST00000604967 SYCP3Q8IZU3 236 aa11.54□□□□□ -0.56
TUBE1-210ENST00000604967 SLC44A3Q8N4M1 653 aa11.54□□□□□ -0.56
TUBE1-210ENST00000604967 ATAD1Q8NBU5 361 aa11.54□□□□□ -0.56
TUBE1-210ENST00000604967 ELMO3Q96BJ8 720 aa11.54□□□□□ -0.56
TUBE1-210ENST00000604967 TSPAN18Q96SJ8 248 aa11.54□□□□□ -0.56
TUBE1-210ENST00000604967 PLA2G2FQ9BZM2 168 aa11.54□□□□□ -0.56
TUBE1-210ENST00000604967 MTMR12Q9C0I1 747 aa11.54□□□□□ -0.56
TUBE1-210ENST00000604967 MAGEF1Q9HAY2 307 aa11.54□□□□□ -0.56
TUBE1-210ENST00000604967 PIDD1Q9HB75 910 aa11.54□□□□□ -0.56
TUBE1-210ENST00000604967 CYP4F11Q9HBI6 524 aa11.54□□□□□ -0.56
TUBE1-210ENST00000604967 FAM13BQ9NYF5 915 aa11.54□□□□□ -0.56
TUBE1-210ENST00000604967 POLIQ9UNA4 740 aa11.54□□□□□ -0.56
TUBE1-210ENST00000604967 EXOC7Q9UPT5 735 aa11.54□□□□□ -0.56
TUBE1-210ENST00000604967 SLC27A5Q9Y2P5 690 aa11.54□□□□□ -0.56
TUBE1-210ENST00000604967 PVALEFA0A1B0GWK0 134 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 MTMR11A4FU01 709 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 KRBA1A5PL33 1030 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 H7C4K7 107 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 CYB561D2O14569 222 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 IL18RAPO95256 599 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 ITGB3P05106 788 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 RHOP08100 348 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 GJA1P17302 382 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 FCARP24071 287 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 CASP4P49662 377 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 YWHAHQ04917 246 aaPredicted RBP11.53□□□□□ -0.56
TUBE1-210ENST00000604967 DUSP4Q13115 394 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 CWF19L1Q69YN2 538 aaKnown RBP11.53□□□□□ -0.56
TUBE1-210ENST00000604967 OVOS1Q6IE37 1185 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 CENPPQ6IPU0 288 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 ARMCX5Q6P1M9 558 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 DSTYKQ6XUX3 929 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 LIMS2Q7Z4I7 341 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 TMC8Q8IU68 726 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 GPD1LQ8N335 351 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 PLCD3Q8N3E9 789 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 FSIP1Q8NA03 581 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 RDH13Q8NBN7 331 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 APPL2Q8NEU8 664 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 PRSS33Q8NF86 280 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 NOC3LQ8WTT2 800 aaKnown RBP11.53□□□□□ -0.56
TUBE1-210ENST00000604967 PBXIP1Q96AQ6 731 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 ZSWIM3Q96MP5 696 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 PKMYT1Q99640 499 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 PYM1Q9BRP8 204 aaKnown RBP11.53□□□□□ -0.56
TUBE1-210ENST00000604967 KCTD10Q9H3F6 313 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 TMEM206Q9H813 350 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 INTS13Q9NVM9 706 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 AFF4Q9UHB7 1163 aaKnown RBP11.53□□□□□ -0.56
TUBE1-210ENST00000604967 L1RE1Q9UN81 338 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 AGAP1Q9UPQ3 857 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 NUMBLQ9Y6R0 609 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 MYO15AQ9UKN7 3530 aa11.53□□□□□ -0.56
TUBE1-210ENST00000604967 A0A1W2PQ27 194 aa11.52□□□□□ -0.57
TUBE1-210ENST00000604967 A0A1W2PQ64 194 aa11.52□□□□□ -0.57
TUBE1-210ENST00000604967 A0A1W2PQD8 194 aa11.52□□□□□ -0.57
TUBE1-210ENST00000604967 SHISA7A6NL88 538 aa11.52□□□□□ -0.57
TUBE1-210ENST00000604967 KPNA7A9QM74 516 aa11.52□□□□□ -0.57
TUBE1-210ENST00000604967 PI15O43692 258 aa11.52□□□□□ -0.57
TUBE1-210ENST00000604967 CST3P01034 146 aaPredicted RBP11.52□□□□□ -0.57
TUBE1-210ENST00000604967 CYP2J2P51589 502 aa11.52□□□□□ -0.57
TUBE1-210ENST00000604967 AMPD3Q01432 767 aa11.52□□□□□ -0.57
TUBE1-210ENST00000604967 TWF1Q12792 350 aa11.52□□□□□ -0.57
TUBE1-210ENST00000604967 DPYDQ12882 1025 aa11.52□□□□□ -0.57
TUBE1-210ENST00000604967 GPR17Q13304 367 aa11.52□□□□□ -0.57
TUBE1-210ENST00000604967 TDGQ13569 410 aa11.52□□□□□ -0.57
TUBE1-210ENST00000604967 MTMR3Q13615 1198 aa11.52□□□□□ -0.57
TUBE1-210ENST00000604967 PABPC1LQ4VXU2 614 aaKnown RBP11.52□□□□□ -0.57
TUBE1-210ENST00000604967 C1orf220Q5T0J3 134 aa11.52□□□□□ -0.57
TUBE1-210ENST00000604967 TPGS2Q68CL5 300 aa11.52□□□□□ -0.57
TUBE1-210ENST00000604967 PDCL2Q8N4E4 241 aa11.52□□□□□ -0.57
TUBE1-210ENST00000604967 TMEM105Q8N8V8 129 aa11.52□□□□□ -0.57
TUBE1-210ENST00000604967 STKLD1Q8NE28 680 aa11.52□□□□□ -0.57
TUBE1-210ENST00000604967 ENGASEQ8NFI3 743 aa11.52□□□□□ -0.57
TUBE1-210ENST00000604967 ACSF2Q96CM8 615 aaPredicted RBP11.52□□□□□ -0.57
TUBE1-210ENST00000604967 RSPRY1Q96DX4 576 aa11.52□□□□□ -0.57
TUBE1-210ENST00000604967 CORO1BQ9BR76 489 aa11.52□□□□□ -0.57
TUBE1-210ENST00000604967 MKNK1Q9BUB5 465 aa11.52□□□□□ -0.57
TUBE1-210ENST00000604967 ZCWPW1Q9H0M4 648 aa11.52□□□□□ -0.57
TUBE1-210ENST00000604967 ZNF334Q9HCZ1 680 aaPredicted RBP11.52□□□□□ -0.57
TUBE1-210ENST00000604967 DMAC2Q9NW81 257 aa11.52□□□□□ -0.57
TUBE1-210ENST00000604967 DPP7Q9UHL4 492 aa11.52□□□□□ -0.57
TUBE1-210ENST00000604967 CDH7Q9ULB5 785 aa11.52□□□□□ -0.57
TUBE1-210ENST00000604967 DUSP12Q9UNI6 340 aa11.52□□□□□ -0.57
TUBE1-210ENST00000604967 YIPF1Q9Y548 306 aa11.52□□□□□ -0.57
TUBE1-210ENST00000604967 PRRG1O14668 218 aa11.51□□□□□ -0.57
TUBE1-210ENST00000604967 ODC1P11926 461 aa11.51□□□□□ -0.57
TUBE1-210ENST00000604967 CPB1P15086 417 aa11.51□□□□□ -0.57
TUBE1-210ENST00000604967 ATF6P18850 670 aa11.51□□□□□ -0.57
TUBE1-210ENST00000604967 GPR15P49685 360 aa11.51□□□□□ -0.57
TUBE1-210ENST00000604967 TAF6P49848 677 aa11.51□□□□□ -0.57
TUBE1-210ENST00000604967 EPHA5P54756 1037 aa11.51□□□□□ -0.57
TUBE1-210ENST00000604967 CYP24A1Q07973 514 aa11.51□□□□□ -0.57
TUBE1-210ENST00000604967 SNW1Q13573 536 aaKnown RBP11.51□□□□□ -0.57
TUBE1-210ENST00000604967 SNRNP35Q16560 246 aaKnown RBP11.51□□□□□ -0.57
TUBE1-210ENST00000604967 KNOP1Q1ED39 458 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms