RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 PGLYRP2Q96PD5 576 aa15.55■□□□□ 0.08
TUBE1-208ENST00000604743 FNBP1Q96RU3 617 aa15.55■□□□□ 0.08
TUBE1-208ENST00000604743 INTS13Q9NVM9 706 aa15.55■□□□□ 0.08
TUBE1-208ENST00000604743 USTQ9Y2C2 406 aa15.55■□□□□ 0.08
TUBE1-208ENST00000604743 R3HCC1Q9Y3T6 440 aaKnown RBP15.55■□□□□ 0.08
TUBE1-208ENST00000604743 NOTCH4Q99466 2003 aa15.55■□□□□ 0.08
TUBE1-208ENST00000604743 PTPRJQ12913 1337 aa15.54■□□□□ 0.08
TUBE1-208ENST00000604743 ARHGEF37A1IGU5 675 aa15.54■□□□□ 0.08
TUBE1-208ENST00000604743 ASGR2P07307 311 aa15.54■□□□□ 0.08
TUBE1-208ENST00000604743 TNNI1P19237 187 aa15.54■□□□□ 0.08
TUBE1-208ENST00000604743 PAX3P23760 479 aa15.54■□□□□ 0.08
TUBE1-208ENST00000604743 ANP32AP39687 249 aaKnown RBP15.54■□□□□ 0.08
TUBE1-208ENST00000604743 PNOCQ13519 176 aa15.54■□□□□ 0.08
TUBE1-208ENST00000604743 TMEM31Q5JXX7 168 aa15.54■□□□□ 0.08
TUBE1-208ENST00000604743 WSCD1Q658N2 575 aa15.54■□□□□ 0.08
TUBE1-208ENST00000604743 TPGS2Q68CL5 300 aa15.54■□□□□ 0.08
TUBE1-208ENST00000604743 ZDHHC14Q8IZN3 488 aa15.54■□□□□ 0.08
TUBE1-208ENST00000604743 TMEM209Q96SK2 561 aa15.54■□□□□ 0.08
TUBE1-208ENST00000604743 RHOBTB2Q9BYZ6 727 aa15.54■□□□□ 0.08
TUBE1-208ENST00000604743 HCFC1R1Q9NWW0 138 aa15.54■□□□□ 0.08
TUBE1-208ENST00000604743 CGNQ9P2M7 1197 aaKnown RBP15.54■□□□□ 0.08
TUBE1-208ENST00000604743 ITGA11Q9UKX5 1188 aa15.54■□□□□ 0.08
TUBE1-208ENST00000604743 CIZ1Q9ULV3 898 aaPredicted RBP15.54■□□□□ 0.08
TUBE1-208ENST00000604743 OR6C75A6NL08 312 aa15.53■□□□□ 0.08
TUBE1-208ENST00000604743 N4BP1O75113 896 aaKnown RBP15.53■□□□□ 0.08
TUBE1-208ENST00000604743 RHOBTB3O94955 611 aa15.53■□□□□ 0.08
TUBE1-208ENST00000604743 FSHRP23945 695 aa15.53■□□□□ 0.08
TUBE1-208ENST00000604743 HOXA9P31269 272 aa15.53■□□□□ 0.08
TUBE1-208ENST00000604743 PNPLA4P41247 253 aa15.53■□□□□ 0.08
TUBE1-208ENST00000604743 RBP5P82980 135 aa15.53■□□□□ 0.08
TUBE1-208ENST00000604743 ZXDAP98168 799 aa15.53■□□□□ 0.08
TUBE1-208ENST00000604743 FAM160A1Q05DH4 1040 aa15.53■□□□□ 0.08
TUBE1-208ENST00000604743 CYP24A1Q07973 514 aa15.53■□□□□ 0.08
TUBE1-208ENST00000604743 PTPN21Q16825 1174 aa15.53■□□□□ 0.08
TUBE1-208ENST00000604743 DUOXA2Q1HG44 320 aa15.53■□□□□ 0.08
TUBE1-208ENST00000604743 C12orf56Q8IXR9 622 aa15.53■□□□□ 0.08
TUBE1-208ENST00000604743 THEM5Q8N1Q8 247 aa15.53■□□□□ 0.08
TUBE1-208ENST00000604743 GOLGA5Q8TBA6 731 aa15.53■□□□□ 0.08
TUBE1-208ENST00000604743 ERCC4Q92889 916 aaPredicted RBP15.53■□□□□ 0.08
TUBE1-208ENST00000604743 BORCS6Q96GS4 357 aa15.53■□□□□ 0.08
TUBE1-208ENST00000604743 MYADMQ96S97 322 aa15.53■□□□□ 0.08
TUBE1-208ENST00000604743 LRFN3Q9BTN0 628 aa15.53■□□□□ 0.08
TUBE1-208ENST00000604743 C11orf16Q9NQ32 467 aa15.53■□□□□ 0.08
TUBE1-208ENST00000604743 DNMT3BQ9UBC3 853 aaKnown RBP15.53■□□□□ 0.08
TUBE1-208ENST00000604743 AFF4Q9UHB7 1163 aaKnown RBP15.53■□□□□ 0.08
TUBE1-208ENST00000604743 SIX4Q9UIU6 781 aa15.53■□□□□ 0.08
TUBE1-208ENST00000604743 DSEQ9UL01 958 aa15.53■□□□□ 0.08
TUBE1-208ENST00000604743 INSL5Q9Y5Q6 135 aa15.53■□□□□ 0.08
TUBE1-208ENST00000604743 TECTAO75443 2155 aa15.52■□□□□ 0.08
TUBE1-208ENST00000604743 CALUO43852 315 aaPredicted RBP15.52■□□□□ 0.08
TUBE1-208ENST00000604743 PAPLNO95428 1278 aa15.52■□□□□ 0.08
TUBE1-208ENST00000604743 CYP11A1P05108 521 aa15.52■□□□□ 0.08
TUBE1-208ENST00000604743 TWF1Q12792 350 aa15.52■□□□□ 0.08
TUBE1-208ENST00000604743 SNW1Q13573 536 aaKnown RBP15.52■□□□□ 0.08
TUBE1-208ENST00000604743 PSMD6Q15008 389 aa15.52■□□□□ 0.08
TUBE1-208ENST00000604743 WDR49Q8IV35 697 aa15.52■□□□□ 0.08
TUBE1-208ENST00000604743 TCEAL8Q8IYN2 117 aa15.52■□□□□ 0.08
TUBE1-208ENST00000604743 ENGASEQ8NFI3 743 aa15.52■□□□□ 0.08
TUBE1-208ENST00000604743 ST13P5Q8NFI4 369 aaPredicted RBP15.52■□□□□ 0.08
TUBE1-208ENST00000604743 OR10T2Q8NGX3 314 aa15.52■□□□□ 0.08
TUBE1-208ENST00000604743 EDAQ92838 391 aa15.52■□□□□ 0.08
TUBE1-208ENST00000604743 CGRRF1Q99675 332 aa15.52■□□□□ 0.08
TUBE1-208ENST00000604743 OXCT2Q9BYC2 517 aaPredicted RBP15.52■□□□□ 0.08
TUBE1-208ENST00000604743 KCTD10Q9H3F6 313 aa15.52■□□□□ 0.08
TUBE1-208ENST00000604743 SLC27A5Q9Y2P5 690 aa15.52■□□□□ 0.08
TUBE1-208ENST00000604743 SNX9Q9Y5X1 595 aa15.52■□□□□ 0.08
TUBE1-208ENST00000604743 PDXKO00764 312 aa15.51■□□□□ 0.07
TUBE1-208ENST00000604743 GPR37L1O60883 481 aa15.51■□□□□ 0.07
TUBE1-208ENST00000604743 HUS1O60921 280 aa15.51■□□□□ 0.07
TUBE1-208ENST00000604743 GADD45BO75293 160 aaPredicted RBP15.51■□□□□ 0.07
TUBE1-208ENST00000604743 KIF20AO95235 890 aa15.51■□□□□ 0.07
TUBE1-208ENST00000604743 NR3C1P04150 777 aa15.51■□□□□ 0.07
TUBE1-208ENST00000604743 CASP4P49662 377 aa15.51■□□□□ 0.07
TUBE1-208ENST00000604743 DUSP4Q13115 394 aa15.51■□□□□ 0.07
TUBE1-208ENST00000604743 GPR17Q13304 367 aa15.51■□□□□ 0.07
TUBE1-208ENST00000604743 MYBPC2Q14324 1141 aa15.51■□□□□ 0.07
TUBE1-208ENST00000604743 KCNB1Q14721 858 aa15.51■□□□□ 0.07
TUBE1-208ENST00000604743 PABPC1LQ4VXU2 614 aaKnown RBP15.51■□□□□ 0.07
TUBE1-208ENST00000604743 SLC39A12Q504Y0 691 aa15.51■□□□□ 0.07
TUBE1-208ENST00000604743 CEP135Q66GS9 1140 aa15.51■□□□□ 0.07
TUBE1-208ENST00000604743 RTL10Q7L3V2 364 aa15.51■□□□□ 0.07
TUBE1-208ENST00000604743 TRAPPC11Q7Z392 1133 aa15.51■□□□□ 0.07
TUBE1-208ENST00000604743 SMYD4Q8IYR2 804 aaPredicted RBP15.51■□□□□ 0.07
TUBE1-208ENST00000604743 LRRC52Q8N7C0 313 aa15.51■□□□□ 0.07
TUBE1-208ENST00000604743 ATAD1Q8NBU5 361 aa15.51■□□□□ 0.07
TUBE1-208ENST00000604743 CXorf38Q8TB03 319 aa15.51■□□□□ 0.07
TUBE1-208ENST00000604743 MFSD14AQ96MC6 490 aa15.51■□□□□ 0.07
TUBE1-208ENST00000604743 RTP3Q9BQQ7 232 aa15.51■□□□□ 0.07
TUBE1-208ENST00000604743 CORO1BQ9BR76 489 aa15.51■□□□□ 0.07
TUBE1-208ENST00000604743 SMOC2Q9H3U7 446 aa15.51■□□□□ 0.07
TUBE1-208ENST00000604743 CHMP5Q9NZZ3 219 aa15.51■□□□□ 0.07
TUBE1-208ENST00000604743 SORCS3Q9UPU3 1222 aa15.51■□□□□ 0.07
TUBE1-208ENST00000604743 MTMR11A4FU01 709 aa15.5■□□□□ 0.07
TUBE1-208ENST00000604743 PRPF40AO75400 957 aaKnown RBP15.5■□□□□ 0.07
TUBE1-208ENST00000604743 CLSTN1O94985 981 aa15.5■□□□□ 0.07
TUBE1-208ENST00000604743 VNN2O95498 520 aa15.5■□□□□ 0.07
TUBE1-208ENST00000604743 RHOP08100 348 aa15.5■□□□□ 0.07
TUBE1-208ENST00000604743 PTPN2P17706 415 aa15.5■□□□□ 0.07
TUBE1-208ENST00000604743 MYO1EQ12965 1108 aa15.5■□□□□ 0.07
TUBE1-208ENST00000604743 MTMR3Q13615 1198 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms