RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 PACSIN1Q9BY11 444 aa13.11□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 CRISPLD2Q9H0B8 497 aa13.11□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 LHX5Q9H2C1 402 aa13.11□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 AGO3Q9H9G7 860 aaKnown RBP13.11□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 SEPT11Q9NVA2 429 aaKnown RBP13.11□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 PARP2Q9UGN5 583 aa13.11□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 SALL4Q9UJQ4 1053 aa13.11□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 BARX2Q9UMQ3 279 aaPredicted RBP13.11□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 CEP83Q9Y592 693 aa13.11□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 SAR1BQ9Y6B6 198 aa13.11□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 EOMESO95936 686 aa13.1□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 MYCNP04198 464 aaPredicted RBP13.1□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 CCL5P13501 91 aa13.1□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 SELPP16109 830 aa13.1□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 RPL9P32969 192 aaKnown RBP13.1□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 NSFP46459 744 aaKnown RBP13.1□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 GSCP56915 257 aaPredicted RBP13.1□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 NOMO3P69849 1222 aa13.1□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 ITIH3Q06033 890 aa13.1□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 CKAP4Q07065 602 aaKnown RBP13.1□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 NFX1Q12986 1120 aaKnown RBP13.1□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 ANKRD33Q7Z3H0 272 aa13.1□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 PALB2Q86YC2 1186 aa13.1□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 ANKLE1Q8NAG6 615 aa13.1□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 TPCN2Q8NHX9 752 aa13.1□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 SH3TC2Q8TF17 1288 aa13.1□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 ZNF606Q8WXB4 792 aa13.1□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 APBB2Q92870 758 aa13.1□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 UROC1Q96N76 676 aa13.1□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 TOX2Q96NM4 488 aa13.1□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 RPS6KC1Q96S38 1066 aa13.1□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 RNF216Q9NWF9 866 aaPredicted RBP13.1□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 SNX12Q9UMY4 172 aa13.1□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 TFR2Q9UP52 801 aa13.1□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 HYOU1Q9Y4L1 999 aa13.1□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 HES2Q9Y543 173 aa13.1□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 LTBP2Q14767 1821 aa13.1□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 HTTP42858 3142 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 GRID2IPA4D2P6 1211 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 EFCAB8A8MWE9 144 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 TULP1O00294 542 aaPredicted RBP13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 PTGESO14684 152 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 THAP12O43422 761 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 CLSTN1O94985 981 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 GHRP10912 638 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 VDRP11473 427 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 AKAP5P24588 427 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 CD52P31358 61 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 TAF6P49848 677 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 TTC3P53804 2025 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 RAD23BP54727 409 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 NAP1L1P55209 391 aaKnown RBP13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 MEI1Q5TIA1 1274 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 TAF3Q5VWG9 929 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 FBXO46Q6PJ61 603 aaPredicted RBP13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 MON1BQ7L1V2 547 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 ZNF572Q7Z3I7 529 aaPredicted RBP13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 CTU1Q7Z7A3 348 aaKnown RBP13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 GPIHBP1Q8IV16 184 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 TOP6BLQ8N6T0 577 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 TMEM35BQ8NCS4 154 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 MSANTD4Q8NCY6 345 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 MNS1Q8NEH6 495 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 SLC35G2Q8TBE7 412 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 ARMC5Q96C12 935 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 DDX27Q96GQ7 796 aaKnown RBP13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 TMEM176AQ96HP8 235 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 MIS12Q9H081 205 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 THAP2Q9H0W7 228 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 ABCB6Q9NP58 842 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 RGS18Q9NS28 235 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 TAS2R14Q9NYV8 317 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 NXF1Q9UBU9 619 aaKnown RBP13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 TUBGCP4Q9UGJ1 667 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 SCINQ9Y6U3 715 aa13.09□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 PTPRDP23468 1912 aa13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 ARHGEF37A1IGU5 675 aa13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 DYNC1I1O14576 645 aa13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 PALMO75781 387 aa13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 ATP1A1P05023 1023 aaKnown RBP13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 CALB1P05937 261 aa13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 THP07101 528 aa13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 NOP2P46087 812 aaKnown RBP13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 FAM189BP81408 668 aa13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 TAP1Q03518 808 aa13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 GRIK3Q13003 919 aa13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 CLUL1Q15846 466 aa13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 LIN9Q5TKA1 542 aa13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 SLC24A5Q71RS6 500 aa13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 LRRC8DQ7L1W4 858 aa13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 ZNF598Q86UK7 904 aaKnown RBP13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 MCOLN2Q8IZK6 566 aa13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 SLC4A11Q8NBS3 891 aa13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 GSTCDQ8NEC7 633 aa13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 WHAMMQ8TF30 809 aa13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 NT5C1AQ9BXI3 368 aa13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 RNF208Q9H0X6 261 aa13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 TRPV6Q9H1D0 765 aa13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 TSPYL2Q9H2G4 693 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms