RNA–Protein interactions for RNA: ENST00000601665.5

NUP62-223, Transcript of nucleoporin 62, human

TSL 5

Gene NUP62, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-223	ENST00000601665	ACAP3	Q96P50	834 aa		13.42	□□□□□ -0.26
NUP62-223	ENST00000601665	LARP6	Q9BRS8	491 aa	Known RBP	13.42	□□□□□ -0.26
NUP62-223	ENST00000601665	DUSP15	Q9H1R2	295 aa	Predicted RBP	13.42	□□□□□ -0.26
NUP62-223	ENST00000601665	TUFT1	Q9NNX1	390 aa		13.42	□□□□□ -0.26
NUP62-223	ENST00000601665	PCDHB8	Q9UN66	801 aa		13.42	□□□□□ -0.26
NUP62-223	ENST00000601665	TNFSF13B	Q9Y275	285 aa		13.42	□□□□□ -0.26
NUP62-223	ENST00000601665	FLNB	O75369	2602 aa	Known RBP	13.42	□□□□□ -0.26
NUP62-223	ENST00000601665	BCLAF3	A2AJT9	711 aa	Known RBP	13.41	□□□□□ -0.26
NUP62-223	ENST00000601665	DCLK1	O15075	740 aa		13.41	□□□□□ -0.26
NUP62-223	ENST00000601665	RNF40	O75150	1001 aa		13.41	□□□□□ -0.26
NUP62-223	ENST00000601665	TOP3B	O95985	862 aa	Known RBP	13.41	□□□□□ -0.26
NUP62-223	ENST00000601665	HARS	P12081	509 aa	Known RBP	13.41	□□□□□ -0.26
NUP62-223	ENST00000601665	CYP11B2	P19099	503 aa		13.41	□□□□□ -0.26
NUP62-223	ENST00000601665	CSRP1	P21291	193 aa	Known RBP	13.41	□□□□□ -0.26
NUP62-223	ENST00000601665	GABRR2	P28476	465 aa		13.41	□□□□□ -0.26
NUP62-223	ENST00000601665	KRT2	P35908	639 aa		13.41	□□□□□ -0.26
NUP62-223	ENST00000601665	MCM2	P49736	904 aa		13.41	□□□□□ -0.26
NUP62-223	ENST00000601665	TOB2	Q14106	344 aa	Predicted RBP	13.41	□□□□□ -0.26
NUP62-223	ENST00000601665	TAF12	Q16514	161 aa		13.41	□□□□□ -0.26
NUP62-223	ENST00000601665	TMEM196	Q5HYL7	178 aa		13.41	□□□□□ -0.26
NUP62-223	ENST00000601665	RUFY3	Q7L099	469 aa		13.41	□□□□□ -0.26
NUP62-223	ENST00000601665	ITIH5	Q86UX2	942 aa		13.41	□□□□□ -0.26
NUP62-223	ENST00000601665	TMC8	Q8IU68	726 aa		13.41	□□□□□ -0.26
NUP62-223	ENST00000601665	ERMN	Q8TAM6	284 aa		13.41	□□□□□ -0.26
NUP62-223	ENST00000601665	GATA6	Q92908	595 aa		13.41	□□□□□ -0.26
NUP62-223	ENST00000601665	C18orf25	Q96B23	403 aa	Predicted RBP	13.41	□□□□□ -0.26
NUP62-223	ENST00000601665	LRRC3B	Q96PB8	259 aa		13.41	□□□□□ -0.26
NUP62-223	ENST00000601665	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.41	□□□□□ -0.26
NUP62-223	ENST00000601665	OXCT2	Q9BYC2	517 aa	Predicted RBP	13.41	□□□□□ -0.26
NUP62-223	ENST00000601665	ASB3	Q9Y575	518 aa		13.41	□□□□□ -0.26
NUP62-223	ENST00000601665	CYP46A1	Q9Y6A2	500 aa		13.41	□□□□□ -0.26
NUP62-223	ENST00000601665	FAM205C	A6NFA0	338 aa		13.4	□□□□□ -0.26
NUP62-223	ENST00000601665	APBB3	O95704	486 aa		13.4	□□□□□ -0.26
NUP62-223	ENST00000601665	KCNE1	P15382	129 aa		13.4	□□□□□ -0.26
NUP62-223	ENST00000601665	NR5A1	Q13285	461 aa		13.4	□□□□□ -0.26
NUP62-223	ENST00000601665	XKR4	Q5GH76	650 aa		13.4	□□□□□ -0.26
NUP62-223	ENST00000601665	EARS2	Q5JPH6	523 aa	Known RBP	13.4	□□□□□ -0.26
NUP62-223	ENST00000601665	FSTL4	Q6MZW2	842 aa		13.4	□□□□□ -0.26
NUP62-223	ENST00000601665	ALKAL1	Q6UXT8	129 aa		13.4	□□□□□ -0.26
NUP62-223	ENST00000601665	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.4	□□□□□ -0.26
NUP62-223	ENST00000601665	C11orf74	Q86VG3	221 aa		13.4	□□□□□ -0.26
NUP62-223	ENST00000601665	CATSPER3	Q86XQ3	398 aa		13.4	□□□□□ -0.26
NUP62-223	ENST00000601665	WASF1	Q92558	559 aa		13.4	□□□□□ -0.26
NUP62-223	ENST00000601665	KIFAP3	Q92845	792 aa		13.4	□□□□□ -0.26
NUP62-223	ENST00000601665	ZMAT2	Q96NC0	199 aa	Known RBP	13.4	□□□□□ -0.26
NUP62-223	ENST00000601665	LRRC3	Q9BY71	257 aa		13.4	□□□□□ -0.26
NUP62-223	ENST00000601665	CDT1	Q9H211	546 aa		13.4	□□□□□ -0.26
NUP62-223	ENST00000601665	SLC32A1	Q9H598	525 aa		13.4	□□□□□ -0.26
NUP62-223	ENST00000601665	GKN1	Q9NS71	199 aa		13.4	□□□□□ -0.26
NUP62-223	ENST00000601665	GJB4	Q9NTQ9	266 aa		13.4	□□□□□ -0.26
NUP62-223	ENST00000601665	WASF3	Q9UPY6	502 aa		13.4	□□□□□ -0.26
NUP62-223	ENST00000601665	SLC27A5	Q9Y2P5	690 aa		13.4	□□□□□ -0.26
NUP62-223	ENST00000601665	ITPR1	Q14643	2758 aa		13.4	□□□□□ -0.26
NUP62-223	ENST00000601665	TRIP11	Q15643	1979 aa		13.4	□□□□□ -0.27
NUP62-223	ENST00000601665	NBEA	Q8NFP9	2946 aa		13.4	□□□□□ -0.27
NUP62-223	ENST00000601665	OR6C75	A6NL08	312 aa		13.39	□□□□□ -0.27
NUP62-223	ENST00000601665	CCDC169	A6NNP5	214 aa		13.39	□□□□□ -0.27
NUP62-223	ENST00000601665	PRAMEF12	O95522	483 aa		13.39	□□□□□ -0.27
NUP62-223	ENST00000601665	OR4Q2	P0C623	313 aa		13.39	□□□□□ -0.27
NUP62-223	ENST00000601665	SPATA31C1	P0DKV0	1188 aa		13.39	□□□□□ -0.27
NUP62-223	ENST00000601665	RDX	P35241	583 aa	Known RBP	13.39	□□□□□ -0.27
NUP62-223	ENST00000601665	DGKE	P52429	567 aa		13.39	□□□□□ -0.27
NUP62-223	ENST00000601665	IRX6	P78412	446 aa	Predicted RBP	13.39	□□□□□ -0.27
NUP62-223	ENST00000601665	CACNB1	Q02641	598 aa	Predicted RBP	13.39	□□□□□ -0.27
NUP62-223	ENST00000601665	PSMD2	Q13200	908 aa		13.39	□□□□□ -0.27
NUP62-223	ENST00000601665	VEPH1	Q14D04	833 aa		13.39	□□□□□ -0.27
NUP62-223	ENST00000601665	ARMCX5	Q6P1M9	558 aa		13.39	□□□□□ -0.27
NUP62-223	ENST00000601665	CC2D1A	Q6P1N0	951 aa	Predicted RBP	13.39	□□□□□ -0.27
NUP62-223	ENST00000601665	GAREM2	Q75VX8	874 aa		13.39	□□□□□ -0.27
NUP62-223	ENST00000601665	CYP2U1	Q7Z449	544 aa		13.39	□□□□□ -0.27
NUP62-223	ENST00000601665	DEFB124	Q8NES8	71 aa		13.39	□□□□□ -0.27
NUP62-223	ENST00000601665	PSMG2	Q969U7	264 aa		13.39	□□□□□ -0.27
NUP62-223	ENST00000601665	ACD	Q96AP0	544 aa		13.39	□□□□□ -0.27
NUP62-223	ENST00000601665	MRPL4	Q9BYD3	311 aa	Known RBP	13.39	□□□□□ -0.27
NUP62-223	ENST00000601665	SMG9	Q9H0W8	520 aa	Known RBP	13.39	□□□□□ -0.27
NUP62-223	ENST00000601665	DNAJC25	Q9H1X3	360 aa		13.39	□□□□□ -0.27
NUP62-223	ENST00000601665	TASP1	Q9H6P5	420 aa		13.39	□□□□□ -0.27
NUP62-223	ENST00000601665	POLD4	Q9HCU8	107 aa		13.39	□□□□□ -0.27
NUP62-223	ENST00000601665	CNTN3	Q9P232	1028 aa		13.39	□□□□□ -0.27
NUP62-223	ENST00000601665	NEUROG3	Q9Y4Z2	214 aa		13.39	□□□□□ -0.27
NUP62-223	ENST00000601665	TIMM13	Q9Y5L4	95 aa	Predicted RBP	13.39	□□□□□ -0.27
NUP62-223	ENST00000601665	STK36	Q9NRP7	1315 aa		13.39	□□□□□ -0.27
NUP62-223	ENST00000601665	TRDMT1	O14717	391 aa	Known RBP	13.38	□□□□□ -0.27
NUP62-223	ENST00000601665	HYAL3	O43820	417 aa	Predicted RBP	13.38	□□□□□ -0.27
NUP62-223	ENST00000601665	MED24	O75448	989 aa		13.38	□□□□□ -0.27
NUP62-223	ENST00000601665	SEC24B	O95487	1268 aa		13.38	□□□□□ -0.27
NUP62-223	ENST00000601665	EGF	P01133	1207 aa		13.38	□□□□□ -0.27
NUP62-223	ENST00000601665	MCF2	P10911	925 aa		13.38	□□□□□ -0.27
NUP62-223	ENST00000601665	DRD1	P21728	446 aa		13.38	□□□□□ -0.27
NUP62-223	ENST00000601665	CDC25C	P30307	473 aa		13.38	□□□□□ -0.27
NUP62-223	ENST00000601665	AVPR1A	P37288	418 aa		13.38	□□□□□ -0.27
NUP62-223	ENST00000601665	CYP4F8	P98187	520 aa		13.38	□□□□□ -0.27
NUP62-223	ENST00000601665	BFSP1	Q12934	665 aa		13.38	□□□□□ -0.27
NUP62-223	ENST00000601665	GPR17	Q13304	367 aa		13.38	□□□□□ -0.27
NUP62-223	ENST00000601665	RUNX3	Q13761	415 aa		13.38	□□□□□ -0.27
NUP62-223	ENST00000601665	FBXO43	Q4G163	708 aa		13.38	□□□□□ -0.27
NUP62-223	ENST00000601665	USP39	Q53GS9	565 aa	Known RBP	13.38	□□□□□ -0.27
NUP62-223	ENST00000601665	DSTYK	Q6XUX3	929 aa		13.38	□□□□□ -0.27
NUP62-223	ENST00000601665	BEST2	Q8NFU1	509 aa		13.38	□□□□□ -0.27
NUP62-223	ENST00000601665	RPLP0P6	Q8NHW5	317 aa		13.38	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms