RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 DLX2Q07687 328 aaPredicted RBP14.86□□□□□ -0.03
SNRPA-208ENST00000600456 BIRC3Q13489 604 aa14.86□□□□□ -0.03
SNRPA-208ENST00000600456 CTXN3Q4LDR2 81 aa14.86□□□□□ -0.03
SNRPA-208ENST00000600456 C1orf220Q5T0J3 134 aa14.86□□□□□ -0.03
SNRPA-208ENST00000600456 TDRD10Q5VZ19 366 aaKnown RBP14.86□□□□□ -0.03
SNRPA-208ENST00000600456 OVOS1Q6IE37 1185 aa14.86□□□□□ -0.03
SNRPA-208ENST00000600456 ANKRD54Q6NXT1 300 aa14.86□□□□□ -0.03
SNRPA-208ENST00000600456 LILRA6Q6PI73 481 aa14.86□□□□□ -0.03
SNRPA-208ENST00000600456 C15orf39Q6ZRI6 1047 aa14.86□□□□□ -0.03
SNRPA-208ENST00000600456 FILIP1Q7Z7B0 1213 aa14.86□□□□□ -0.03
SNRPA-208ENST00000600456 TOP6BLQ8N6T0 577 aa14.86□□□□□ -0.03
SNRPA-208ENST00000600456 SYAP1Q96A49 352 aaPredicted RBP14.86□□□□□ -0.03
SNRPA-208ENST00000600456 EEF2KMTQ96G04 330 aa14.86□□□□□ -0.03
SNRPA-208ENST00000600456 PLEKHA4Q9H4M7 779 aa14.86□□□□□ -0.03
SNRPA-208ENST00000600456 ARMCX3Q9UH62 379 aaPredicted RBP14.86□□□□□ -0.03
SNRPA-208ENST00000600456 CD207Q9UJ71 328 aa14.86□□□□□ -0.03
SNRPA-208ENST00000600456 FBXL5Q9UKA1 691 aa14.86□□□□□ -0.03
SNRPA-208ENST00000600456 BARX2Q9UMQ3 279 aaPredicted RBP14.86□□□□□ -0.03
SNRPA-208ENST00000600456 CDY1Q9Y6F8 540 aa14.86□□□□□ -0.03
SNRPA-208ENST00000600456 H3BQ06 376 aaPredicted RBP14.85□□□□□ -0.03
SNRPA-208ENST00000600456 TGM5O43548 720 aa14.85□□□□□ -0.03
SNRPA-208ENST00000600456 HUS1O60921 280 aa14.85□□□□□ -0.03
SNRPA-208ENST00000600456 ERCC5P28715 1186 aaPredicted RBP14.85□□□□□ -0.03
SNRPA-208ENST00000600456 RBM10P98175 930 aaKnown RBP14.85□□□□□ -0.03
SNRPA-208ENST00000600456 TFF2Q03403 129 aa14.85□□□□□ -0.03
SNRPA-208ENST00000600456 NCOA4Q13772 614 aa14.85□□□□□ -0.03
SNRPA-208ENST00000600456 DPCR1Q3MIW9 517 aa14.85□□□□□ -0.03
SNRPA-208ENST00000600456 RSPO2Q6UXX9 243 aaPredicted RBP14.85□□□□□ -0.03
SNRPA-208ENST00000600456 SV2AQ7L0J3 742 aa14.85□□□□□ -0.03
SNRPA-208ENST00000600456 RTL10Q7L3V2 364 aa14.85□□□□□ -0.03
SNRPA-208ENST00000600456 DPH6Q7L8W6 267 aa14.85□□□□□ -0.03
SNRPA-208ENST00000600456 FRMD5Q7Z6J6 570 aa14.85□□□□□ -0.03
SNRPA-208ENST00000600456 PALB2Q86YC2 1186 aa14.85□□□□□ -0.03
SNRPA-208ENST00000600456 TMEM86AQ8N2M4 240 aa14.85□□□□□ -0.03
SNRPA-208ENST00000600456 TAF4BQ92750 862 aa14.85□□□□□ -0.03
SNRPA-208ENST00000600456 ASB2Q96Q27 587 aa14.85□□□□□ -0.03
SNRPA-208ENST00000600456 VRTNQ9H8Y1 702 aa14.85□□□□□ -0.03
SNRPA-208ENST00000600456 MAFFQ9ULX9 164 aa14.85□□□□□ -0.03
SNRPA-208ENST00000600456 FAM50BQ9Y247 325 aa14.85□□□□□ -0.03
SNRPA-208ENST00000600456 TIMM13Q9Y5L4 95 aaPredicted RBP14.85□□□□□ -0.03
SNRPA-208ENST00000600456 SNX9Q9Y5X1 595 aa14.85□□□□□ -0.03
SNRPA-208ENST00000600456 REV3LO60673 3130 aa14.85□□□□□ -0.03
SNRPA-208ENST00000600456 VWA8A3KMH1 1905 aa14.84□□□□□ -0.03
SNRPA-208ENST00000600456 ADAM12O43184 909 aa14.84□□□□□ -0.03
SNRPA-208ENST00000600456 CST3P01034 146 aaPredicted RBP14.84□□□□□ -0.03
SNRPA-208ENST00000600456 FAM163BP0C2L3 166 aa14.84□□□□□ -0.03
SNRPA-208ENST00000600456 TRIM49P0CI25 452 aa14.84□□□□□ -0.03
SNRPA-208ENST00000600456 TRIM49CP0CI26 452 aa14.84□□□□□ -0.03
SNRPA-208ENST00000600456 STX17P56962 302 aa14.84□□□□□ -0.03
SNRPA-208ENST00000600456 ITIH3Q06033 890 aa14.84□□□□□ -0.03
SNRPA-208ENST00000600456 SMAD4Q13485 552 aaKnown RBP14.84□□□□□ -0.03
SNRPA-208ENST00000600456 TPGS2Q68CL5 300 aa14.84□□□□□ -0.03
SNRPA-208ENST00000600456 SCARA3Q6AZY7 606 aa14.84□□□□□ -0.03
SNRPA-208ENST00000600456 SYCE2Q6PIF2 218 aa14.84□□□□□ -0.03
SNRPA-208ENST00000600456 CYP26C1Q6V0L0 522 aa14.84□□□□□ -0.03
SNRPA-208ENST00000600456 LIMS2Q7Z4I7 341 aa14.84□□□□□ -0.03
SNRPA-208ENST00000600456 GLYCTKQ8IVS8 523 aa14.84□□□□□ -0.03
SNRPA-208ENST00000600456 THEM5Q8N1Q8 247 aa14.84□□□□□ -0.03
SNRPA-208ENST00000600456 SMRP1Q8NCR6 262 aa14.84□□□□□ -0.03
SNRPA-208ENST00000600456 KREMEN2Q8NCW0 462 aa14.84□□□□□ -0.03
SNRPA-208ENST00000600456 ZNF461Q8TAF7 563 aa14.84□□□□□ -0.03
SNRPA-208ENST00000600456 XYLT2Q9H1B5 865 aa14.84□□□□□ -0.03
SNRPA-208ENST00000600456 SFXN1Q9H9B4 322 aa14.84□□□□□ -0.03
SNRPA-208ENST00000600456 TMEM8AQ9HCN3 771 aa14.84□□□□□ -0.03
SNRPA-208ENST00000600456 MAN1C1Q9NR34 630 aa14.84□□□□□ -0.03
SNRPA-208ENST00000600456 FBXW11Q9UKB1 542 aa14.84□□□□□ -0.03
SNRPA-208ENST00000600456 EYSQ5T1H1 3165 aa14.84□□□□□ -0.03
SNRPA-208ENST00000600456 ABLIM3O94929 683 aa14.83□□□□□ -0.04
SNRPA-208ENST00000600456 PAPLNO95428 1278 aa14.83□□□□□ -0.04
SNRPA-208ENST00000600456 VNN1O95497 513 aa14.83□□□□□ -0.04
SNRPA-208ENST00000600456 GCLMP48507 274 aa14.83□□□□□ -0.04
SNRPA-208ENST00000600456 MARSP56192 900 aaKnown RBP14.83□□□□□ -0.04
SNRPA-208ENST00000600456 MYL6P60660 151 aa14.83□□□□□ -0.04
SNRPA-208ENST00000600456 TNNC1P63316 161 aa14.83□□□□□ -0.04
SNRPA-208ENST00000600456 ROR1Q01973 937 aa14.83□□□□□ -0.04
SNRPA-208ENST00000600456 PPP3CAQ08209 521 aa14.83□□□□□ -0.04
SNRPA-208ENST00000600456 SGSM1Q2NKQ1 1148 aa14.83□□□□□ -0.04
SNRPA-208ENST00000600456 KLHL40Q2TBA0 621 aa14.83□□□□□ -0.04
SNRPA-208ENST00000600456 CCDC40Q4G0X9 1142 aa14.83□□□□□ -0.04
SNRPA-208ENST00000600456 LIN9Q5TKA1 542 aa14.83□□□□□ -0.04
SNRPA-208ENST00000600456 WSCD1Q658N2 575 aa14.83□□□□□ -0.04
SNRPA-208ENST00000600456 KRT39Q6A163 491 aa14.83□□□□□ -0.04
SNRPA-208ENST00000600456 PTCRAQ6ISU1 281 aaPredicted RBP14.83□□□□□ -0.04
SNRPA-208ENST00000600456 SASS6Q6UVJ0 657 aa14.83□□□□□ -0.04
SNRPA-208ENST00000600456 PDCL2Q8N4E4 241 aa14.83□□□□□ -0.04
SNRPA-208ENST00000600456 CMASQ8NFW8 434 aaPredicted RBP14.83□□□□□ -0.04
SNRPA-208ENST00000600456 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.83□□□□□ -0.04
SNRPA-208ENST00000600456 RHOBTB2Q9BYZ6 727 aa14.83□□□□□ -0.04
SNRPA-208ENST00000600456 S1PR5Q9H228 398 aa14.83□□□□□ -0.04
SNRPA-208ENST00000600456 ADAM7Q9H2U9 754 aa14.83□□□□□ -0.04
SNRPA-208ENST00000600456 ZDHHC7Q9NXF8 308 aa14.83□□□□□ -0.04
SNRPA-208ENST00000600456 L1RE1Q9UN81 338 aa14.83□□□□□ -0.04
SNRPA-208ENST00000600456 BRWD1Q9NSI6 2320 aa14.83□□□□□ -0.04
SNRPA-208ENST00000600456 SCN1AP35498 2009 aa14.82□□□□□ -0.04
SNRPA-208ENST00000600456 SPDYE4A6NLX3 237 aa14.82□□□□□ -0.04
SNRPA-208ENST00000600456 P4HA1P13674 534 aa14.82□□□□□ -0.04
SNRPA-208ENST00000600456 CPB1P15086 417 aa14.82□□□□□ -0.04
SNRPA-208ENST00000600456 ATF2P15336 505 aa14.82□□□□□ -0.04
SNRPA-208ENST00000600456 HOXA9P31269 272 aa14.82□□□□□ -0.04
SNRPA-208ENST00000600456 PIK3CAP42336 1068 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms