RNA–Protein interactions for RNA: ENST00000600358.7

STRN4-218, Transcript of striatin 4, humanhuman

TSL 5

Gene STRN4, Length 1,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-218ENST00000600358 SNX9Q9Y5X1 595 aa17.47■□□□□ 0.39
STRN4-218ENST00000600358 MRPL42Q9Y6G3 142 aaKnown RBP17.47■□□□□ 0.39
STRN4-218ENST00000600358 TNRC18O15417 2968 aaPredicted RBP17.47■□□□□ 0.39
STRN4-218ENST00000600358 PLXNA4Q9HCM2 1894 aa17.46■□□□□ 0.39
STRN4-218ENST00000600358 LRRC53A6NM62 1247 aa17.46■□□□□ 0.39
STRN4-218ENST00000600358 H0YGN5 161 aa17.46■□□□□ 0.39
STRN4-218ENST00000600358 RNF225M0QZC1 329 aaPredicted RBP17.46■□□□□ 0.39
STRN4-218ENST00000600358 TRAPPC3O43617 180 aa17.46■□□□□ 0.39
STRN4-218ENST00000600358 LINC00271P0C7V0 271 aa17.46■□□□□ 0.39
STRN4-218ENST00000600358 ODC1P11926 461 aa17.46■□□□□ 0.39
STRN4-218ENST00000600358 TYMPP19971 482 aa17.46■□□□□ 0.39
STRN4-218ENST00000600358 SOX5P35711 763 aa17.46■□□□□ 0.39
STRN4-218ENST00000600358 PPM1AP35813 382 aa17.46■□□□□ 0.39
STRN4-218ENST00000600358 STAT1P42224 750 aa17.46■□□□□ 0.39
STRN4-218ENST00000600358 ZNF132P52740 706 aa17.46■□□□□ 0.39
STRN4-218ENST00000600358 RAPGEF1Q13905 1077 aa17.46■□□□□ 0.39
STRN4-218ENST00000600358 MEA1Q16626 185 aa17.46■□□□□ 0.39
STRN4-218ENST00000600358 TMCO2Q7Z6W1 182 aaPredicted RBP17.46■□□□□ 0.39
STRN4-218ENST00000600358 FAM71AQ8IYT1 594 aa17.46■□□□□ 0.39
STRN4-218ENST00000600358 RNF168Q8IYW5 571 aaPredicted RBP17.46■□□□□ 0.39
STRN4-218ENST00000600358 SENP8Q96LD8 212 aa17.46■□□□□ 0.39
STRN4-218ENST00000600358 ZNF558Q96NG5 402 aa17.46■□□□□ 0.39
STRN4-218ENST00000600358 ARID3AQ99856 593 aa17.46■□□□□ 0.39
STRN4-218ENST00000600358 UBE2OQ9C0C9 1292 aaKnown RBP17.46■□□□□ 0.39
STRN4-218ENST00000600358 SMYD3Q9H7B4 428 aa17.46■□□□□ 0.39
STRN4-218ENST00000600358 HCSTQ9UBK5 93 aa17.46■□□□□ 0.39
STRN4-218ENST00000600358 NXF1Q9UBU9 619 aaKnown RBP17.46■□□□□ 0.39
STRN4-218ENST00000600358 STK39Q9UEW8 545 aa17.46■□□□□ 0.39
STRN4-218ENST00000600358 DSEQ9UL01 958 aa17.46■□□□□ 0.39
STRN4-218ENST00000600358 PCDHB8Q9UN66 801 aa17.46■□□□□ 0.39
STRN4-218ENST00000600358 FAN1Q9Y2M0 1017 aa17.46■□□□□ 0.39
STRN4-218ENST00000600358 RWDD3Q9Y3V2 267 aa17.46■□□□□ 0.39
STRN4-218ENST00000600358 SF3B1O75533 1304 aaKnown RBP eCLIP17.46■□□□□ 0.382e-6■■■■■ 86.6
STRN4-218ENST00000600358 SYN3O14994 580 aa17.45■□□□□ 0.38
STRN4-218ENST00000600358 TLL1O43897 1013 aa17.45■□□□□ 0.38
STRN4-218ENST00000600358 HUS1O60921 280 aa17.45■□□□□ 0.38
STRN4-218ENST00000600358 CILPO75339 1184 aa17.45■□□□□ 0.38
STRN4-218ENST00000600358 FERP16591 822 aa17.45■□□□□ 0.38
STRN4-218ENST00000600358 WARSP23381 471 aaKnown RBP17.45■□□□□ 0.38
STRN4-218ENST00000600358 PRKCIP41743 596 aa17.45■□□□□ 0.38
STRN4-218ENST00000600358 CDK17Q00537 523 aa17.45■□□□□ 0.38
STRN4-218ENST00000600358 SHHQ15465 462 aa17.45■□□□□ 0.38
STRN4-218ENST00000600358 SOWAHAQ2M3V2 549 aa17.45■□□□□ 0.38
STRN4-218ENST00000600358 TIGD5Q53EQ6 642 aa17.45■□□□□ 0.38
STRN4-218ENST00000600358 FAM117BQ6P1L5 589 aa17.45■□□□□ 0.38
STRN4-218ENST00000600358 KCNT2Q6UVM3 1135 aa17.45■□□□□ 0.38
STRN4-218ENST00000600358 UNC93AQ86WB7 457 aa17.45■□□□□ 0.38
STRN4-218ENST00000600358 SLC39A11Q8N1S5 342 aa17.45■□□□□ 0.38
STRN4-218ENST00000600358 FIBCD1Q8N539 461 aa17.45■□□□□ 0.38
STRN4-218ENST00000600358 COLGALT1Q8NBJ5 622 aa17.45■□□□□ 0.38
STRN4-218ENST00000600358 APPL2Q8NEU8 664 aa17.45■□□□□ 0.38
STRN4-218ENST00000600358 OR8K1Q8NGG5 319 aa17.45■□□□□ 0.38
STRN4-218ENST00000600358 ZBED2Q9BTP6 218 aa17.45■□□□□ 0.38
STRN4-218ENST00000600358 SDCBP2Q9H190 292 aa17.45■□□□□ 0.38
STRN4-218ENST00000600358 AAASQ9NRG9 546 aa17.45■□□□□ 0.38
STRN4-218ENST00000600358 CISHQ9NSE2 258 aa17.45■□□□□ 0.38
STRN4-218ENST00000600358 BARX2Q9UMQ3 279 aaPredicted RBP17.45■□□□□ 0.38
STRN4-218ENST00000600358 L1RE1Q9UN81 338 aa17.45■□□□□ 0.38
STRN4-218ENST00000600358 CYB561D2O14569 222 aa17.44■□□□□ 0.38
STRN4-218ENST00000600358 GABRDO14764 452 aa17.44■□□□□ 0.38
STRN4-218ENST00000600358 CLSTN1O94985 981 aa17.44■□□□□ 0.38
STRN4-218ENST00000600358 ITGB1P05556 798 aa17.44■□□□□ 0.38
STRN4-218ENST00000600358 CCDC172P0C7W6 258 aa17.44■□□□□ 0.38
STRN4-218ENST00000600358 ALDH7A1P49419 539 aaKnown RBP17.44■□□□□ 0.38
STRN4-218ENST00000600358 ARHGAP44Q17R89 818 aa17.44■□□□□ 0.38
STRN4-218ENST00000600358 SFMBT2Q5VUG0 894 aa17.44■□□□□ 0.38
STRN4-218ENST00000600358 SCARA5Q6ZMJ2 495 aa17.44■□□□□ 0.38
STRN4-218ENST00000600358 ADGRF2Q8IZF7 708 aa17.44■□□□□ 0.38
STRN4-218ENST00000600358 PDCL2Q8N4E4 241 aa17.44■□□□□ 0.38
STRN4-218ENST00000600358 KBTBD7Q8WVZ9 684 aa17.44■□□□□ 0.38
STRN4-218ENST00000600358 ELMO3Q96BJ8 720 aa17.44■□□□□ 0.38
STRN4-218ENST00000600358 IGSF21Q96ID5 467 aa17.44■□□□□ 0.38
STRN4-218ENST00000600358 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.44■□□□□ 0.382e-7■■■■■ 172.5
STRN4-218ENST00000600358 PRG3Q9Y2Y8 225 aaPredicted RBP17.44■□□□□ 0.38
STRN4-218ENST00000600358 PCDHA11Q9Y5I1 949 aa17.44■□□□□ 0.38
STRN4-218ENST00000600358 PTPRDP23468 1912 aa17.44■□□□□ 0.38
STRN4-218ENST00000600358 FOXN3O00409 490 aaPredicted RBP17.43■□□□□ 0.38
STRN4-218ENST00000600358 CAPN15O75808 1086 aa17.43■□□□□ 0.38
STRN4-218ENST00000600358 PAEPP09466 180 aa17.43■□□□□ 0.38
STRN4-218ENST00000600358 BRCC3P46736 316 aa17.43■□□□□ 0.38
STRN4-218ENST00000600358 ADKP55263 362 aaKnown RBP17.43■□□□□ 0.38
STRN4-218ENST00000600358 E4F1Q66K89 784 aaPredicted RBP17.43■□□□□ 0.38
STRN4-218ENST00000600358 FUT10Q6P4F1 479 aa17.43■□□□□ 0.38
STRN4-218ENST00000600358 DSTYKQ6XUX3 929 aa17.43■□□□□ 0.38
STRN4-218ENST00000600358 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.43■□□□□ 0.38
STRN4-218ENST00000600358 CCDC186Q7Z3E2 898 aa17.43■□□□□ 0.38
STRN4-218ENST00000600358 GPR65Q8IYL9 337 aa17.43■□□□□ 0.38
STRN4-218ENST00000600358 CPLX3Q8WVH0 158 aa17.43■□□□□ 0.38
STRN4-218ENST00000600358 MMS19Q96T76 1030 aa17.43■□□□□ 0.38
STRN4-218ENST00000600358 PRO3102Q9H379 93 aa17.43■□□□□ 0.38
STRN4-218ENST00000600358 F8W810 466 aa17.42■□□□□ 0.38
STRN4-218ENST00000600358 TADA2AO75478 443 aa17.42■□□□□ 0.38
STRN4-218ENST00000600358 WEE2P0C1S8 567 aa17.42■□□□□ 0.38
STRN4-218ENST00000600358 FGFR3P22607 806 aa17.42■□□□□ 0.38
STRN4-218ENST00000600358 IGFBP6P24592 240 aaPredicted RBP17.42■□□□□ 0.38
STRN4-218ENST00000600358 ANXA13P27216 316 aa17.42■□□□□ 0.38
STRN4-218ENST00000600358 RAP1GAPP47736 663 aa17.42■□□□□ 0.38
STRN4-218ENST00000600358 LHX1P48742 406 aa17.42■□□□□ 0.38
STRN4-218ENST00000600358 BPIFB4P59827 614 aa17.42■□□□□ 0.38
STRN4-218ENST00000600358 ASIC2Q16515 512 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms