RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 IFT52Q9Y366 437 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 ACTL7BQ9Y614 415 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 PCDH11YQ9BZA8 1340 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 SIN3BO75182 1162 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 CDH16O75309 829 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 CD48P09326 243 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 IRX4P78413 519 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 APOFQ13790 326 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 PSMD6Q15008 389 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 C4orf22Q6V702 233 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 PCYOX1LQ8NBM8 494 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 SLC26A7Q8TE54 656 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 TAMM41Q96BW9 452 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 THAP11Q96EK4 314 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 SGF29Q96ES7 293 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 RNF38Q9H0F5 515 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 AS3MTQ9HBK9 375 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 COPRSQ9NQ92 184 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 DDX56Q9NY93 547 aaKnown RBP10.36□□□□□ -0.75
NFKB1-212ENST00000600343 DNAJC16Q9Y2G8 782 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 DTNAQ9Y4J8 743 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 MYH11P35749 1972 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 CDK2AP1O14519 115 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 DENRO43583 198 aaKnown RBP10.36□□□□□ -0.75
NFKB1-212ENST00000600343 SRGAP2CP0DJJ0 459 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 SRGAP2BP0DMP2 458 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 ADSLP30566 484 aaPredicted RBP10.36□□□□□ -0.75
NFKB1-212ENST00000600343 IFNA8P32881 189 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 PTGIRP43119 386 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 YWHAGP61981 247 aaKnown RBP eCLIP10.36□□□□□ -0.75
NFKB1-212ENST00000600343 MYBPC1Q00872 1141 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 KCNC4Q03721 635 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 ZNF211Q13398 564 aaPredicted RBP10.36□□□□□ -0.75
NFKB1-212ENST00000600343 C15orf59Q2T9L4 293 aaPredicted RBP10.36□□□□□ -0.75
NFKB1-212ENST00000600343 TPTE2Q6XPS3 522 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 AMIGO2Q86SJ2 522 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 ELMOD1Q8N336 334 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 EXD1Q8NHP7 514 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 ACMSDQ8TDX5 336 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 LSM14BQ9BX40 385 aaKnown RBP10.36□□□□□ -0.75
NFKB1-212ENST00000600343 MARCH7Q9H992 704 aa10.36□□□□□ -0.75
NFKB1-212ENST00000600343 NWD2Q9ULI1 1742 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 CAPN8A6NHC0 703 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 IFIT1P09914 478 aaKnown RBP10.35□□□□□ -0.75
NFKB1-212ENST00000600343 S100A5P33763 92 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 TRIM16LQ309B1 348 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 IGDCC4Q8TDY8 1250 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 GIMAP1Q8WWP7 306 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 ART4Q93070 314 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 HAUS8Q9BT25 410 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 NUF2Q9BZD4 464 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 KLC2Q9H0B6 622 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 IGSF9Q9P2J2 1179 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 PCDHA4Q9UN74 947 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 ZMYM2Q9UBW7 1377 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 TSPOAP1O95153 1857 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 KRBA1A5PL33 1030 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 THAP12O43422 761 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 ICMTO60725 284 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 CETPP11597 493 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 RALGDSQ12967 914 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 SGMS1Q86VZ5 419 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 TBC1D10CQ8IV04 446 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 SNX29Q8TEQ0 813 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 TTC25Q96NG3 672 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 PLIN2Q99541 437 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 B3GNT4Q9C0J1 378 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 C10orf88Q9H8K7 445 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 DISC1Q9NRI5 854 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 KANSL3Q9P2N6 904 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 LGALS13Q9UHV8 139 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 PCDHGB4Q9UN71 923 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 PCDHGB5Q9Y5G0 923 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 PCDHGA11Q9Y5H2 935 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 ABCB11O95342 1321 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 CAMTA2O94983 1202 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 ABCB1P08183 1280 aaPredicted RBP10.35□□□□□ -0.75
NFKB1-212ENST00000600343 FAM58BPP0C7Q3 252 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 P4HA1P13674 534 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 CHRNA3P32297 505 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 ETV3P41162 512 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 SNAPC2Q13487 334 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 TCIRG1Q13488 830 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 BOLA3Q53S33 107 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 HERC4Q5GLZ8 1057 aaPredicted RBP10.35□□□□□ -0.75
NFKB1-212ENST00000600343 SLFN11Q7Z7L1 901 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 TTC30BQ8N4P2 665 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 RBM15BQ8NDT2 890 aaKnown RBP10.35□□□□□ -0.75
NFKB1-212ENST00000600343 SH3RF3Q8TEJ3 882 aaPredicted RBP10.35□□□□□ -0.75
NFKB1-212ENST00000600343 CAPSLQ8WWF8 208 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 OLFM1Q99784 485 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 CCDC177Q9NQR7 707 aaPredicted RBP10.35□□□□□ -0.75
NFKB1-212ENST00000600343 GNPTGQ9UJJ9 305 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 GRID1Q9ULK0 1009 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 EMSYQ7Z589 1322 aa10.35□□□□□ -0.75
NFKB1-212ENST00000600343 DDX60Q8IY21 1712 aaKnown RBP10.34□□□□□ -0.75
NFKB1-212ENST00000600343 ZSCAN5BA6NJL1 495 aa10.34□□□□□ -0.75
NFKB1-212ENST00000600343 A8MU76 341 aa10.34□□□□□ -0.75
NFKB1-212ENST00000600343 LONP1P36776 959 aaKnown RBP10.34□□□□□ -0.75
NFKB1-212ENST00000600343 CLK3P49761 638 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms