RNA–Protein interactions for RNA: ENST00000597254.1

SH2D3A-206, Transcript of SH2 domain containing 3A, humanhuman

TSL 4

Gene SH2D3A, Length 586 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-206ENST00000597254 BAG1Q99933 345 aaPredicted RBP12.3□□□□□ -0.44
SH2D3A-206ENST00000597254 GPR88Q9GZN0 384 aa12.3□□□□□ -0.44
SH2D3A-206ENST00000597254 KCNF1Q9H3M0 494 aa12.3□□□□□ -0.44
SH2D3A-206ENST00000597254 GOLGA2P5Q9HBQ8 144 aa12.3□□□□□ -0.44
SH2D3A-206ENST00000597254 AIPL1Q9NZN9 384 aa12.3□□□□□ -0.44
SH2D3A-206ENST00000597254 KANSL3Q9P2N6 904 aa12.3□□□□□ -0.44
SH2D3A-206ENST00000597254 INPP5FQ9Y2H2 1132 aa12.3□□□□□ -0.44
SH2D3A-206ENST00000597254 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.3□□□□□ -0.44
SH2D3A-206ENST00000597254 PTPRSQ13332 1948 aa12.3□□□□□ -0.44
SH2D3A-206ENST00000597254 MICAL3Q7RTP6 2002 aa12.29□□□□□ -0.44
SH2D3A-206ENST00000597254 PPEF2O14830 753 aa12.29□□□□□ -0.44
SH2D3A-206ENST00000597254 CLSTN1O94985 981 aa12.29□□□□□ -0.44
SH2D3A-206ENST00000597254 FECHP22830 423 aa12.29□□□□□ -0.44
SH2D3A-206ENST00000597254 TBXAS1P24557 533 aaPredicted RBP12.29□□□□□ -0.44
SH2D3A-206ENST00000597254 RPL9P32969 192 aaKnown RBP12.29□□□□□ -0.44
SH2D3A-206ENST00000597254 SOX5P35711 763 aa12.29□□□□□ -0.44
SH2D3A-206ENST00000597254 CCZ1BP86790 482 aa12.29□□□□□ -0.44
SH2D3A-206ENST00000597254 CCZ1P86791 482 aaPredicted RBP12.29□□□□□ -0.44
SH2D3A-206ENST00000597254 MYO1EQ12965 1108 aa12.29□□□□□ -0.44
SH2D3A-206ENST00000597254 CUL2Q13617 745 aa12.29□□□□□ -0.44
SH2D3A-206ENST00000597254 ASIC2Q16515 512 aa12.29□□□□□ -0.44
SH2D3A-206ENST00000597254 WDR72Q3MJ13 1102 aa12.29□□□□□ -0.44
SH2D3A-206ENST00000597254 E4F1Q66K89 784 aaPredicted RBP12.29□□□□□ -0.44
SH2D3A-206ENST00000597254 IRF2BP2Q7Z5L9 587 aa12.29□□□□□ -0.44
SH2D3A-206ENST00000597254 NPAS4Q8IUM7 802 aa12.29□□□□□ -0.44
SH2D3A-206ENST00000597254 TMEM139Q8IV31 216 aa12.29□□□□□ -0.44
SH2D3A-206ENST00000597254 LRRC52Q8N7C0 313 aa12.29□□□□□ -0.44
SH2D3A-206ENST00000597254 CCDC112Q8NEF3 446 aa12.29□□□□□ -0.44
SH2D3A-206ENST00000597254 URGCPQ8TCY9 931 aa12.29□□□□□ -0.44
SH2D3A-206ENST00000597254 JAKMIP2Q96AA8 810 aa12.29□□□□□ -0.44
SH2D3A-206ENST00000597254 CASD1Q96PB1 797 aa12.29□□□□□ -0.44
SH2D3A-206ENST00000597254 CHP1Q99653 195 aa12.29□□□□□ -0.44
SH2D3A-206ENST00000597254 ZNHIT6Q9NWK9 470 aaKnown RBP12.29□□□□□ -0.44
SH2D3A-206ENST00000597254 NXF1Q9UBU9 619 aaKnown RBP12.29□□□□□ -0.44
SH2D3A-206ENST00000597254 MTUS1Q9ULD2 1270 aa12.29□□□□□ -0.44
SH2D3A-206ENST00000597254 POLIQ9UNA4 740 aa12.29□□□□□ -0.44
SH2D3A-206ENST00000597254 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.29□□□□□ -0.44
SH2D3A-206ENST00000597254 TTC3P53804 2025 aa12.28□□□□□ -0.44
SH2D3A-206ENST00000597254 LINC01553A4QN01 128 aa12.28□□□□□ -0.44
SH2D3A-206ENST00000597254 F8VZ95 297 aa12.28□□□□□ -0.44
SH2D3A-206ENST00000597254 HOXA2O43364 376 aa12.28□□□□□ -0.44
SH2D3A-206ENST00000597254 GFPT2O94808 682 aa12.28□□□□□ -0.44
SH2D3A-206ENST00000597254 DDHD2O94830 711 aa12.28□□□□□ -0.44
SH2D3A-206ENST00000597254 UPP2O95045 317 aa12.28□□□□□ -0.44
SH2D3A-206ENST00000597254 PNMA6AP0CW24 399 aaPredicted RBP12.28□□□□□ -0.44
SH2D3A-206ENST00000597254 SKILP12757 684 aa12.28□□□□□ -0.44
SH2D3A-206ENST00000597254 FERP16591 822 aa12.28□□□□□ -0.44
SH2D3A-206ENST00000597254 ERVK-21P61565 698 aa12.28□□□□□ -0.44
SH2D3A-206ENST00000597254 CDK17Q00537 523 aa12.28□□□□□ -0.44
SH2D3A-206ENST00000597254 TUSC3Q13454 348 aa12.28□□□□□ -0.44
SH2D3A-206ENST00000597254 MEA1Q16626 185 aa12.28□□□□□ -0.44
SH2D3A-206ENST00000597254 SPRED2Q7Z698 418 aa12.28□□□□□ -0.44
SH2D3A-206ENST00000597254 TMTC1Q8IUR5 882 aa12.28□□□□□ -0.44
SH2D3A-206ENST00000597254 ABI1Q8IZP0 508 aa12.28□□□□□ -0.44
SH2D3A-206ENST00000597254 GDPD5Q8WTR4 605 aa12.28□□□□□ -0.44
SH2D3A-206ENST00000597254 SHC3Q92529 594 aa12.28□□□□□ -0.44
SH2D3A-206ENST00000597254 TOP1MTQ969P6 601 aa12.28□□□□□ -0.44
SH2D3A-206ENST00000597254 DDX27Q96GQ7 796 aaKnown RBP12.28□□□□□ -0.44
SH2D3A-206ENST00000597254 YME1L1Q96TA2 773 aa12.28□□□□□ -0.44
SH2D3A-206ENST00000597254 NIF3L1Q9GZT8 377 aa12.28□□□□□ -0.44
SH2D3A-206ENST00000597254 CACNG4Q9UBN1 327 aa12.28□□□□□ -0.44
SH2D3A-206ENST00000597254 TDRD15B5MCY1 1934 aaKnown RBP12.28□□□□□ -0.44
SH2D3A-206ENST00000597254 CASTOR2A6NHX0 329 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 KPNA7A9QM74 516 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 PODXLO00592 558 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 NRDCO43847 1150 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 SERPING1P05155 500 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 WEE2P0C1S8 567 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 P4HA1P13674 534 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 ACO1P21399 889 aaKnown RBP12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 IGFBP6P24592 240 aaPredicted RBP12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 USP8P40818 1118 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 PNPLA4P41247 253 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 PRKCIP41743 596 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 ASPAP45381 313 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 TAF6P49848 677 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 GATMP50440 423 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 CLCNKBP51801 687 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 CDH8P55286 799 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 LILRA4P59901 499 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 TNNC1P63316 161 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 ARID5AQ03989 594 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 UPP1Q16831 310 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 HGSNATQ68CP4 663 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 CYP26C1Q6V0L0 522 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 ZNF280BQ86YH2 543 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 GPIHBP1Q8IV16 184 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 FMNL3Q8IVF7 1028 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 FAM71AQ8IYT1 594 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 UBR7Q8N806 425 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 FBXO22Q8NEZ5 403 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 ADAMTS19Q8TE59 1207 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 ZNF560Q96MR9 790 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 UROC1Q96N76 676 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 FAM193BQ96PV7 902 aaPredicted RBP12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 ARID3AQ99856 593 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 BCO2Q9BYV7 579 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 SDCBP2Q9H190 292 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 CYP3A43Q9HB55 503 aa12.27□□□□□ -0.45
SH2D3A-206ENST00000597254 TBC1D13Q9NVG8 400 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms