RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 DENND4AQ7Z401 1863 aa23.62■■□□□ 1.37
HOMER3-206ENST00000594439 CCDC195A0A1B0GUA6 201 aa23.61■■□□□ 1.37
HOMER3-206ENST00000594439 ARHGEF37A1IGU5 675 aa23.61■■□□□ 1.37
HOMER3-206ENST00000594439 C19orf67A6NJJ6 358 aa23.61■■□□□ 1.37
HOMER3-206ENST00000594439 BFSP1Q12934 665 aa23.61■■□□□ 1.37
HOMER3-206ENST00000594439 EDRF1Q3B7T1 1238 aa23.61■■□□□ 1.37
HOMER3-206ENST00000594439 ATAT1Q5SQI0 421 aa23.61■■□□□ 1.37
HOMER3-206ENST00000594439 CEP135Q66GS9 1140 aa23.61■■□□□ 1.37
HOMER3-206ENST00000594439 ISM2Q6H9L7 571 aa23.61■■□□□ 1.37
HOMER3-206ENST00000594439 CENPPQ6IPU0 288 aa23.61■■□□□ 1.37
HOMER3-206ENST00000594439 C15orf39Q6ZRI6 1047 aa23.61■■□□□ 1.37
HOMER3-206ENST00000594439 ADSSL1Q8N142 457 aa23.61■■□□□ 1.37
HOMER3-206ENST00000594439 ZNF461Q8TAF7 563 aa23.61■■□□□ 1.37
HOMER3-206ENST00000594439 NECTIN4Q96NY8 510 aa23.61■■□□□ 1.37
HOMER3-206ENST00000594439 OXCT2Q9BYC2 517 aaPredicted RBP23.61■■□□□ 1.37
HOMER3-206ENST00000594439 RHOBTB2Q9BYZ6 727 aa23.61■■□□□ 1.37
HOMER3-206ENST00000594439 ZDHHC7Q9NXF8 308 aa23.61■■□□□ 1.37
HOMER3-206ENST00000594439 FRMD4BQ9Y2L6 1034 aa23.61■■□□□ 1.37
HOMER3-206ENST00000594439 LRRIQ3A6PVS8 624 aaPredicted RBP23.6■■□□□ 1.37
HOMER3-206ENST00000594439 MAPK13O15264 365 aa23.6■■□□□ 1.37
HOMER3-206ENST00000594439 BMP6P22004 513 aa23.6■■□□□ 1.37
HOMER3-206ENST00000594439 RPL13P26373 211 aaKnown RBP23.6■■□□□ 1.37
HOMER3-206ENST00000594439 ARPP19P56211 112 aa23.6■■□□□ 1.37
HOMER3-206ENST00000594439 CLDN10P78369 228 aa23.6■■□□□ 1.37
HOMER3-206ENST00000594439 MORC3Q14149 939 aa23.6■■□□□ 1.37
HOMER3-206ENST00000594439 LIN9Q5TKA1 542 aa23.6■■□□□ 1.37
HOMER3-206ENST00000594439 POMKQ9H5K3 350 aa23.6■■□□□ 1.37
HOMER3-206ENST00000594439 LMBRD1Q9NUN5 540 aa23.6■■□□□ 1.37
HOMER3-206ENST00000594439 GDAP2Q9NXN4 497 aa23.6■■□□□ 1.37
HOMER3-206ENST00000594439 DSEQ9UL01 958 aa23.6■■□□□ 1.37
HOMER3-206ENST00000594439 OR6C75A6NL08 312 aa23.59■■□□□ 1.37
HOMER3-206ENST00000594439 AKAP3O75969 853 aa23.59■■□□□ 1.37
HOMER3-206ENST00000594439 C8AP07357 584 aa23.59■■□□□ 1.37
HOMER3-206ENST00000594439 CD44P16070 742 aaKnown RBP23.59■■□□□ 1.37
HOMER3-206ENST00000594439 ADAM9Q13443 819 aa23.59■■□□□ 1.37
HOMER3-206ENST00000594439 WSCD1Q658N2 575 aa23.59■■□□□ 1.37
HOMER3-206ENST00000594439 TPGS2Q68CL5 300 aa23.59■■□□□ 1.37
HOMER3-206ENST00000594439 CYP26C1Q6V0L0 522 aa23.59■■□□□ 1.37
HOMER3-206ENST00000594439 TMC2Q8TDI7 906 aa23.59■■□□□ 1.37
HOMER3-206ENST00000594439 HPDLQ96IR7 371 aa23.59■■□□□ 1.37
HOMER3-206ENST00000594439 RTP3Q9BQQ7 232 aa23.59■■□□□ 1.37
HOMER3-206ENST00000594439 PRKD2Q9BZL6 878 aa23.59■■□□□ 1.37
HOMER3-206ENST00000594439 CUL9Q8IWT3 2517 aa23.58■■□□□ 1.37
HOMER3-206ENST00000594439 CST3P01034 146 aaPredicted RBP23.58■■□□□ 1.37
HOMER3-206ENST00000594439 HNRNPA1P09651 372 aaKnown RBP eCLIP23.58■■□□□ 1.37
HOMER3-206ENST00000594439 PMS1P54277 932 aaKnown RBP23.58■■□□□ 1.37
HOMER3-206ENST00000594439 DLG4P78352 724 aa23.58■■□□□ 1.37
HOMER3-206ENST00000594439 CAMK4Q16566 473 aa23.58■■□□□ 1.37
HOMER3-206ENST00000594439 UVSSAQ2YD98 709 aa23.58■■□□□ 1.37
HOMER3-206ENST00000594439 METTL23Q86XA0 190 aa23.58■■□□□ 1.37
HOMER3-206ENST00000594439 GJD3Q8N144 294 aa23.58■■□□□ 1.37
HOMER3-206ENST00000594439 SLC7A14Q8TBB6 771 aa23.58■■□□□ 1.37
HOMER3-206ENST00000594439 GBP4Q96PP9 640 aa23.58■■□□□ 1.37
HOMER3-206ENST00000594439 AFF4Q9UHB7 1163 aaKnown RBP23.58■■□□□ 1.37
HOMER3-206ENST00000594439 L1RE1Q9UN81 338 aa23.58■■□□□ 1.37
HOMER3-206ENST00000594439 R3HCC1Q9Y3T6 440 aaKnown RBP23.58■■□□□ 1.37
HOMER3-206ENST00000594439 LOC730098B7Z3J9 87 aa23.57■■□□□ 1.36
HOMER3-206ENST00000594439 BIN1O00499 593 aa23.57■■□□□ 1.36
HOMER3-206ENST00000594439 SEC24AO95486 1093 aa23.57■■□□□ 1.36
HOMER3-206ENST00000594439 OR4Q2P0C623 313 aa23.57■■□□□ 1.36
HOMER3-206ENST00000594439 CPB1P15086 417 aa23.57■■□□□ 1.36
HOMER3-206ENST00000594439 ATF2P15336 505 aa23.57■■□□□ 1.36
HOMER3-206ENST00000594439 HOXA9P31269 272 aa23.57■■□□□ 1.36
HOMER3-206ENST00000594439 AP3M2P53677 418 aa23.57■■□□□ 1.36
HOMER3-206ENST00000594439 MYO1EQ12965 1108 aa23.57■■□□□ 1.36
HOMER3-206ENST00000594439 PPM1LQ5SGD2 360 aa23.57■■□□□ 1.36
HOMER3-206ENST00000594439 C1orf220Q5T0J3 134 aa23.57■■□□□ 1.36
HOMER3-206ENST00000594439 ANKRD40Q6AI12 368 aa23.57■■□□□ 1.36
HOMER3-206ENST00000594439 CCDC149Q6ZUS6 474 aa23.57■■□□□ 1.36
HOMER3-206ENST00000594439 RTL10Q7L3V2 364 aa23.57■■□□□ 1.36
HOMER3-206ENST00000594439 ZC3H3Q8IXZ2 948 aaKnown RBP23.57■■□□□ 1.36
HOMER3-206ENST00000594439 FAM186BQ8IYM0 893 aa23.57■■□□□ 1.36
HOMER3-206ENST00000594439 PDCL2Q8N4E4 241 aa23.57■■□□□ 1.36
HOMER3-206ENST00000594439 OR10T2Q8NGX3 314 aa23.57■■□□□ 1.36
HOMER3-206ENST00000594439 SMG7Q92540 1137 aaKnown RBP23.57■■□□□ 1.36
HOMER3-206ENST00000594439 TMEM209Q96SK2 561 aa23.57■■□□□ 1.36
HOMER3-206ENST00000594439 KIAA1468Q9P260 1216 aa23.57■■□□□ 1.36
HOMER3-206ENST00000594439 SNX9Q9Y5X1 595 aa23.57■■□□□ 1.36
HOMER3-206ENST00000594439 DOCK6Q96HP0 2047 aa23.57■■□□□ 1.36
HOMER3-206ENST00000594439 PPP1R3GB7ZBB8 358 aa23.56■■□□□ 1.36
HOMER3-206ENST00000594439 TNFRSF10AO00220 468 aa23.56■■□□□ 1.36
HOMER3-206ENST00000594439 HUS1O60921 280 aa23.56■■□□□ 1.36
HOMER3-206ENST00000594439 VNN2O95498 520 aa23.56■■□□□ 1.36
HOMER3-206ENST00000594439 C4BPAP04003 597 aaKnown RBP23.56■■□□□ 1.36
HOMER3-206ENST00000594439 CCNE1P24864 410 aa23.56■■□□□ 1.36
HOMER3-206ENST00000594439 PSMC2P35998 433 aaKnown RBP23.56■■□□□ 1.36
HOMER3-206ENST00000594439 MCCD1P59942 119 aaPredicted RBP23.56■■□□□ 1.36
HOMER3-206ENST00000594439 TDRD10Q5VZ19 366 aaKnown RBP23.56■■□□□ 1.36
HOMER3-206ENST00000594439 RNF19BQ6ZMZ0 732 aa23.56■■□□□ 1.36
HOMER3-206ENST00000594439 LIMS2Q7Z4I7 341 aa23.56■■□□□ 1.36
HOMER3-206ENST00000594439 TCEAL8Q8IYN2 117 aa23.56■■□□□ 1.36
HOMER3-206ENST00000594439 DHTKD1Q96HY7 919 aaPredicted RBP23.56■■□□□ 1.36
HOMER3-206ENST00000594439 RPGRIP1Q96KN7 1286 aa23.56■■□□□ 1.36
HOMER3-206ENST00000594439 TSG101Q99816 390 aa23.56■■□□□ 1.36
HOMER3-206ENST00000594439 CLSTN2Q9H4D0 955 aa23.56■■□□□ 1.36
HOMER3-206ENST00000594439 TRIM49BA6NDI0 452 aa23.55■■□□□ 1.36
HOMER3-206ENST00000594439 PSMA7O14818 248 aa23.55■■□□□ 1.36
HOMER3-206ENST00000594439 CETN3O15182 167 aa23.55■■□□□ 1.36
HOMER3-206ENST00000594439 POU2F2P09086 479 aa23.55■■□□□ 1.36
HOMER3-206ENST00000594439 SSTR3P32745 418 aaPredicted RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms