RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 PHF7Q9BWX1 381 aaPredicted RBP15.69■□□□□ 0.1
VRK3-206ENST00000594090 OXCT2Q9BYC2 517 aaPredicted RBP15.69■□□□□ 0.1
VRK3-206ENST00000594090 POMKQ9H5K3 350 aa15.69■□□□□ 0.1
VRK3-206ENST00000594090 DSEQ9UL01 958 aa15.69■□□□□ 0.1
VRK3-206ENST00000594090 FRMD4BQ9Y2L6 1034 aa15.69■□□□□ 0.1
VRK3-206ENST00000594090 MUC3AQ02505 3323 aa15.69■□□□□ 0.1
VRK3-206ENST00000594090 CCDC195A0A1B0GUA6 201 aa15.68■□□□□ 0.1
VRK3-206ENST00000594090 LRRIQ3A6PVS8 624 aaPredicted RBP15.68■□□□□ 0.1
VRK3-206ENST00000594090 MAPK13O15264 365 aa15.68■□□□□ 0.1
VRK3-206ENST00000594090 C8AP07357 584 aa15.68■□□□□ 0.1
VRK3-206ENST00000594090 ARPP19P56211 112 aa15.68■□□□□ 0.1
VRK3-206ENST00000594090 EDRF1Q3B7T1 1238 aa15.68■□□□□ 0.1
VRK3-206ENST00000594090 ISM2Q6H9L7 571 aa15.68■□□□□ 0.1
VRK3-206ENST00000594090 CENPPQ6IPU0 288 aa15.68■□□□□ 0.1
VRK3-206ENST00000594090 TRAPPC11Q7Z392 1133 aa15.68■□□□□ 0.1
VRK3-206ENST00000594090 ADSSL1Q8N142 457 aa15.68■□□□□ 0.1
VRK3-206ENST00000594090 GBP4Q96PP9 640 aa15.68■□□□□ 0.1
VRK3-206ENST00000594090 R3HCC1Q9Y3T6 440 aaKnown RBP15.68■□□□□ 0.1
VRK3-206ENST00000594090 C19orf67A6NJJ6 358 aa15.68■□□□□ 0.1
VRK3-206ENST00000594090 OR6C75A6NL08 312 aa15.68■□□□□ 0.1
VRK3-206ENST00000594090 ZMYND10O75800 440 aa15.68■□□□□ 0.1
VRK3-206ENST00000594090 AKAP3O75969 853 aa15.68■□□□□ 0.1
VRK3-206ENST00000594090 ABLIM3O94929 683 aa15.68■□□□□ 0.1
VRK3-206ENST00000594090 CPB1P15086 417 aa15.68■□□□□ 0.1
VRK3-206ENST00000594090 RPL13P26373 211 aaKnown RBP15.68■□□□□ 0.1
VRK3-206ENST00000594090 CLDN10P78369 228 aa15.68■□□□□ 0.1
VRK3-206ENST00000594090 ATAT1Q5SQI0 421 aa15.68■□□□□ 0.1
VRK3-206ENST00000594090 WSCD1Q658N2 575 aa15.68■□□□□ 0.1
VRK3-206ENST00000594090 CYP26C1Q6V0L0 522 aa15.68■□□□□ 0.1
VRK3-206ENST00000594090 METTL23Q86XA0 190 aa15.68■□□□□ 0.1
VRK3-206ENST00000594090 ZNF461Q8TAF7 563 aa15.68■□□□□ 0.1
VRK3-206ENST00000594090 SLC7A14Q8TBB6 771 aa15.68■□□□□ 0.1
VRK3-206ENST00000594090 ZNF516Q92618 1163 aa15.68■□□□□ 0.1
VRK3-206ENST00000594090 ZNF707Q96C28 371 aaPredicted RBP15.68■□□□□ 0.1
VRK3-206ENST00000594090 RHOBTB2Q9BYZ6 727 aa15.68■□□□□ 0.1
VRK3-206ENST00000594090 CD320Q9NPF0 282 aa15.68■□□□□ 0.1
VRK3-206ENST00000594090 GDAP2Q9NXN4 497 aa15.68■□□□□ 0.1
VRK3-206ENST00000594090 OR4Q2P0C623 313 aa15.67■□□□□ 0.1
VRK3-206ENST00000594090 ATF2P15336 505 aa15.67■□□□□ 0.1
VRK3-206ENST00000594090 BMP6P22004 513 aa15.67■□□□□ 0.1
VRK3-206ENST00000594090 HOXA9P31269 272 aa15.67■□□□□ 0.1
VRK3-206ENST00000594090 AP3M2P53677 418 aa15.67■□□□□ 0.1
VRK3-206ENST00000594090 PMS1P54277 932 aaKnown RBP15.67■□□□□ 0.1
VRK3-206ENST00000594090 DLG4P78352 724 aa15.67■□□□□ 0.1
VRK3-206ENST00000594090 MYO1EQ12965 1108 aa15.67■□□□□ 0.1
VRK3-206ENST00000594090 ADAM9Q13443 819 aa15.67■□□□□ 0.1
VRK3-206ENST00000594090 STIM1Q13586 685 aa15.67■□□□□ 0.1
VRK3-206ENST00000594090 MORC3Q14149 939 aa15.67■□□□□ 0.1
VRK3-206ENST00000594090 CAMK4Q16566 473 aa15.67■□□□□ 0.1
VRK3-206ENST00000594090 PPM1LQ5SGD2 360 aa15.67■□□□□ 0.1
VRK3-206ENST00000594090 TPGS2Q68CL5 300 aa15.67■□□□□ 0.1
VRK3-206ENST00000594090 CCDC149Q6ZUS6 474 aa15.67■□□□□ 0.1
VRK3-206ENST00000594090 RTL10Q7L3V2 364 aa15.67■□□□□ 0.1
VRK3-206ENST00000594090 FAM186BQ8IYM0 893 aa15.67■□□□□ 0.1
VRK3-206ENST00000594090 TMC2Q8TDI7 906 aa15.67■□□□□ 0.1
VRK3-206ENST00000594090 SMG7Q92540 1137 aaKnown RBP15.67■□□□□ 0.1
VRK3-206ENST00000594090 HPDLQ96IR7 371 aa15.67■□□□□ 0.1
VRK3-206ENST00000594090 TSG101Q99816 390 aa15.67■□□□□ 0.1
VRK3-206ENST00000594090 LMBRD1Q9NUN5 540 aa15.67■□□□□ 0.1
VRK3-206ENST00000594090 L1RE1Q9UN81 338 aa15.67■□□□□ 0.1
VRK3-206ENST00000594090 TNFRSF10AO00220 468 aa15.66■□□□□ 0.1
VRK3-206ENST00000594090 BIN1O00499 593 aa15.66■□□□□ 0.1
VRK3-206ENST00000594090 PSMA7O14818 248 aa15.66■□□□□ 0.1
VRK3-206ENST00000594090 HUS1O60921 280 aa15.66■□□□□ 0.1
VRK3-206ENST00000594090 HNRNPA1P09651 372 aaKnown RBP eCLIP15.66■□□□□ 0.1
VRK3-206ENST00000594090 CD44P16070 742 aaKnown RBP15.66■□□□□ 0.1
VRK3-206ENST00000594090 SSTR3P32745 418 aaPredicted RBP15.66■□□□□ 0.1
VRK3-206ENST00000594090 PSMC2P35998 433 aaKnown RBP15.66■□□□□ 0.1
VRK3-206ENST00000594090 PPP1R2P41236 205 aa15.66■□□□□ 0.1
VRK3-206ENST00000594090 LRRC63Q05C16 580 aa15.66■□□□□ 0.1
VRK3-206ENST00000594090 UVSSAQ2YD98 709 aa15.66■□□□□ 0.1
VRK3-206ENST00000594090 TDRD10Q5VZ19 366 aaKnown RBP15.66■□□□□ 0.1
VRK3-206ENST00000594090 RNF19BQ6ZMZ0 732 aa15.66■□□□□ 0.1
VRK3-206ENST00000594090 INTS8Q75QN2 995 aaKnown RBP15.66■□□□□ 0.1
VRK3-206ENST00000594090 GJD3Q8N144 294 aa15.66■□□□□ 0.1
VRK3-206ENST00000594090 PDCL2Q8N4E4 241 aa15.66■□□□□ 0.1
VRK3-206ENST00000594090 OR10T2Q8NGX3 314 aa15.66■□□□□ 0.1
VRK3-206ENST00000594090 TMEM209Q96SK2 561 aa15.66■□□□□ 0.1
VRK3-206ENST00000594090 RTP3Q9BQQ7 232 aa15.66■□□□□ 0.1
VRK3-206ENST00000594090 PRKD2Q9BZL6 878 aa15.66■□□□□ 0.1
VRK3-206ENST00000594090 AFF4Q9UHB7 1163 aaKnown RBP15.66■□□□□ 0.1
VRK3-206ENST00000594090 SNX9Q9Y5X1 595 aa15.66■□□□□ 0.1
VRK3-206ENST00000594090 TRIM49BA6NDI0 452 aa15.65■□□□□ 0.1
VRK3-206ENST00000594090 LOC730098B7Z3J9 87 aa15.65■□□□□ 0.1
VRK3-206ENST00000594090 PRRG1O14668 218 aa15.65■□□□□ 0.1
VRK3-206ENST00000594090 CETN3O15182 167 aa15.65■□□□□ 0.1
VRK3-206ENST00000594090 CCL16O15467 120 aa15.65■□□□□ 0.1
VRK3-206ENST00000594090 CST3P01034 146 aaPredicted RBP15.65■□□□□ 0.1
VRK3-206ENST00000594090 C4BPAP04003 597 aaKnown RBP15.65■□□□□ 0.1
VRK3-206ENST00000594090 SP100P23497 879 aaPredicted RBP15.65■□□□□ 0.1
VRK3-206ENST00000594090 CCNE1P24864 410 aa15.65■□□□□ 0.1
VRK3-206ENST00000594090 ELF1P32519 619 aa15.65■□□□□ 0.1
VRK3-206ENST00000594090 VAMP7P51809 220 aa15.65■□□□□ 0.1
VRK3-206ENST00000594090 ADCY1Q08828 1119 aa15.65■□□□□ 0.1
VRK3-206ENST00000594090 BIRC3Q13489 604 aa15.65■□□□□ 0.1
VRK3-206ENST00000594090 C1orf220Q5T0J3 134 aa15.65■□□□□ 0.1
VRK3-206ENST00000594090 ANKRD40Q6AI12 368 aa15.65■□□□□ 0.1
VRK3-206ENST00000594090 ZC3H3Q8IXZ2 948 aaKnown RBP15.65■□□□□ 0.1
VRK3-206ENST00000594090 TCEAL8Q8IYN2 117 aa15.65■□□□□ 0.1
VRK3-206ENST00000594090 TOP6BLQ8N6T0 577 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms