RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 DSTYKQ6XUX3 929 aa21.12■□□□□ 0.97
LSM4-203ENST00000593829 PPFIBP1Q86W92 1011 aa21.12■□□□□ 0.97
LSM4-203ENST00000593829 DHX40Q8IX18 779 aaKnown RBP21.12■□□□□ 0.97
LSM4-203ENST00000593829 APPL2Q8NEU8 664 aa21.12■□□□□ 0.97
LSM4-203ENST00000593829 ZNF560Q96MR9 790 aa21.12■□□□□ 0.97
LSM4-203ENST00000593829 PCDHB8Q9UN66 801 aa21.12■□□□□ 0.97
LSM4-203ENST00000593829 AGAP1Q9UPQ3 857 aa21.12■□□□□ 0.97
LSM4-203ENST00000593829 TRIM49BA6NDI0 452 aa21.11■□□□□ 0.97
LSM4-203ENST00000593829 TEX28O15482 410 aa21.11■□□□□ 0.97
LSM4-203ENST00000593829 KRT19P08727 400 aa21.11■□□□□ 0.97
LSM4-203ENST00000593829 PNPLA4P41247 253 aa21.11■□□□□ 0.97
LSM4-203ENST00000593829 ANKS3Q6ZW76 656 aa21.11■□□□□ 0.97
LSM4-203ENST00000593829 USP37Q86T82 979 aa21.11■□□□□ 0.97
LSM4-203ENST00000593829 FAM186BQ8IYM0 893 aa21.11■□□□□ 0.97
LSM4-203ENST00000593829 PLEKHO2Q8TD55 490 aa21.11■□□□□ 0.97
LSM4-203ENST00000593829 TMC2Q8TDI7 906 aa21.11■□□□□ 0.97
LSM4-203ENST00000593829 NELFBQ8WX92 580 aa21.11■□□□□ 0.97
LSM4-203ENST00000593829 BPIFA3Q9BQP9 254 aa21.11■□□□□ 0.97
LSM4-203ENST00000593829 NAT10Q9H0A0 1025 aaKnown RBP21.11■□□□□ 0.97
LSM4-203ENST00000593829 FAM53CQ9NYF3 392 aa21.11■□□□□ 0.97
LSM4-203ENST00000593829 THEGQ9P2T0 379 aa21.11■□□□□ 0.97
LSM4-203ENST00000593829 BICDL2A1A5D9 508 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 SPTLC1O15269 473 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 TUBB4AP04350 444 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 SRGAP2BP0DMP2 458 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 SKILP12757 684 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 NDUFV1P49821 464 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 AP3M2P53677 418 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 CLDN10P78369 228 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 KCNC3Q14003 757 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 LLGL2Q6P1M3 1020 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 INTS8Q75QN2 995 aaKnown RBP21.1■□□□□ 0.97
LSM4-203ENST00000593829 TRAPPC11Q7Z392 1133 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 LRRC52Q8N7C0 313 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 CXorf38Q8TB03 319 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 EEF2KMTQ96G04 330 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 MKNK1Q9BUB5 465 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 SIX4Q9UIU6 781 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 LRRIQ3A6PVS8 624 aaPredicted RBP21.1■□□□□ 0.97
LSM4-203ENST00000593829 BECN2A8MW95 431 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 GLP2RO95838 553 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 KRT13P13646 458 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 LTBRP36941 435 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 FAM193AP78312 1265 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 SV2CQ496J9 727 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 VARS2Q5ST30 1063 aaKnown RBP21.1■□□□□ 0.97
LSM4-203ENST00000593829 TAF3Q5VWG9 929 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 FOXR2Q6PJQ5 311 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 TMEM184AQ6ZMB5 413 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 ZC3H3Q8IXZ2 948 aaKnown RBP21.1■□□□□ 0.97
LSM4-203ENST00000593829 VN1R2Q8NFZ6 395 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 KIF18AQ8NI77 898 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 ZNF516Q92618 1163 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 SENP8Q96LD8 212 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 MTRRQ9UBK8 725 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 CTNND2Q9UQB3 1225 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 HCFC2Q9Y5Z7 792 aa21.1■□□□□ 0.97
LSM4-203ENST00000593829 ARHGEF37A1IGU5 675 aa21.09■□□□□ 0.97
LSM4-203ENST00000593829 KPNA7A9QM74 516 aa21.09■□□□□ 0.97
LSM4-203ENST00000593829 EPB41P11171 864 aaKnown RBP21.09■□□□□ 0.97
LSM4-203ENST00000593829 RPL17P18621 184 aaKnown RBP21.09■□□□□ 0.97
LSM4-203ENST00000593829 KCNA5P22460 613 aa21.09■□□□□ 0.97
LSM4-203ENST00000593829 PAK1Q13153 545 aa21.09■□□□□ 0.97
LSM4-203ENST00000593829 CCAR2Q8N163 923 aaKnown RBP21.09■□□□□ 0.97
LSM4-203ENST00000593829 MLKLQ8NB16 471 aa21.09■□□□□ 0.97
LSM4-203ENST00000593829 CLSTN3Q9BQT9 956 aa21.09■□□□□ 0.97
LSM4-203ENST00000593829 BACE2Q9Y5Z0 518 aa21.09■□□□□ 0.97
LSM4-203ENST00000593829 H7C4K7 107 aa21.08■□□□□ 0.97
LSM4-203ENST00000593829 ODC1P11926 461 aa21.08■□□□□ 0.97
LSM4-203ENST00000593829 CLCN4P51793 760 aa21.08■□□□□ 0.97
LSM4-203ENST00000593829 VAMP7P51809 220 aa21.08■□□□□ 0.97
LSM4-203ENST00000593829 ENPEPQ07075 957 aa21.08■□□□□ 0.97
LSM4-203ENST00000593829 TTI2Q6NXR4 508 aa21.08■□□□□ 0.97
LSM4-203ENST00000593829 SLC22A17Q8WUG5 538 aa21.08■□□□□ 0.97
LSM4-203ENST00000593829 CASP10Q92851 521 aa21.08■□□□□ 0.97
LSM4-203ENST00000593829 BORCS6Q96GS4 357 aa21.08■□□□□ 0.97
LSM4-203ENST00000593829 VWA8A3KMH1 1905 aa21.08■□□□□ 0.96
LSM4-203ENST00000593829 IKBKBO14920 756 aa21.08■□□□□ 0.96
LSM4-203ENST00000593829 SLC16A3O15427 465 aaKnown RBP21.08■□□□□ 0.96
LSM4-203ENST00000593829 TBX10O75333 385 aa21.08■□□□□ 0.96
LSM4-203ENST00000593829 TYMPP19971 482 aa21.08■□□□□ 0.96
LSM4-203ENST00000593829 DLG4P78352 724 aa21.08■□□□□ 0.96
LSM4-203ENST00000593829 DLX2Q07687 328 aaPredicted RBP21.08■□□□□ 0.96
LSM4-203ENST00000593829 MYO1EQ12965 1108 aa21.08■□□□□ 0.96
LSM4-203ENST00000593829 MRPL58Q14197 206 aaKnown RBP21.08■□□□□ 0.96
LSM4-203ENST00000593829 SCARA3Q6AZY7 606 aa21.08■□□□□ 0.96
LSM4-203ENST00000593829 GLYCTKQ8IVS8 523 aa21.08■□□□□ 0.96
LSM4-203ENST00000593829 BARX2Q9UMQ3 279 aaPredicted RBP21.08■□□□□ 0.96
LSM4-203ENST00000593829 CYB561D2O14569 222 aa21.07■□□□□ 0.96
LSM4-203ENST00000593829 C1RP00736 705 aa21.07■□□□□ 0.96
LSM4-203ENST00000593829 EPCAMP16422 314 aa21.07■□□□□ 0.96
LSM4-203ENST00000593829 TFF2Q03403 129 aa21.07■□□□□ 0.96
LSM4-203ENST00000593829 BFSP1Q12934 665 aa21.07■□□□□ 0.96
LSM4-203ENST00000593829 DUSP9Q99956 384 aaKnown RBP21.07■□□□□ 0.96
LSM4-203ENST00000593829 CLEC1BQ9P126 229 aa21.07■□□□□ 0.96
LSM4-203ENST00000593829 DSEQ9UL01 958 aa21.07■□□□□ 0.96
LSM4-203ENST00000593829 TIMM13Q9Y5L4 95 aaPredicted RBP21.07■□□□□ 0.96
LSM4-203ENST00000593829 H3BQ06 376 aaPredicted RBP21.06■□□□□ 0.96
LSM4-203ENST00000593829 PHACTR2O75167 634 aa21.06■□□□□ 0.96
LSM4-203ENST00000593829 OAZ2O95190 189 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms