RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 ITGA4P13612 1032 aa14.44□□□□□ -0.1
VMP1-217ENST00000593168 MYL6P60660 151 aa14.44□□□□□ -0.1
VMP1-217ENST00000593168 KRT83P78385 493 aa14.44□□□□□ -0.1
VMP1-217ENST00000593168 RBP5P82980 135 aa14.44□□□□□ -0.1
VMP1-217ENST00000593168 ARID5AQ03989 594 aa14.44□□□□□ -0.1
VMP1-217ENST00000593168 CUL2Q13617 745 aa14.44□□□□□ -0.1
VMP1-217ENST00000593168 MBTPS1Q14703 1052 aa14.44□□□□□ -0.1
VMP1-217ENST00000593168 GPNMBQ14956 572 aa14.44□□□□□ -0.1
VMP1-217ENST00000593168 C17orf53Q8N3J3 647 aaPredicted RBP14.44□□□□□ -0.1
VMP1-217ENST00000593168 BEST2Q8NFU1 509 aa14.44□□□□□ -0.1
VMP1-217ENST00000593168 GDPD5Q8WTR4 605 aa14.44□□□□□ -0.1
VMP1-217ENST00000593168 ZMAT2Q96NC0 199 aaKnown RBP14.44□□□□□ -0.1
VMP1-217ENST00000593168 APOL6Q9BWW8 343 aa14.44□□□□□ -0.1
VMP1-217ENST00000593168 DEF6Q9H4E7 631 aa14.44□□□□□ -0.1
VMP1-217ENST00000593168 HAUS4Q9H6D7 363 aa14.44□□□□□ -0.1
VMP1-217ENST00000593168 CD320Q9NPF0 282 aa14.44□□□□□ -0.1
VMP1-217ENST00000593168 PPP2R2CQ9Y2T4 447 aa14.44□□□□□ -0.1
VMP1-217ENST00000593168 GIT1Q9Y2X7 761 aa14.44□□□□□ -0.1
VMP1-217ENST00000593168 R3HCC1Q9Y3T6 440 aaKnown RBP14.44□□□□□ -0.1
VMP1-217ENST00000593168 NUB1Q9Y5A7 615 aa14.44□□□□□ -0.1
VMP1-217ENST00000593168 TRIP11Q15643 1979 aa14.43□□□□□ -0.1
VMP1-217ENST00000593168 SMIM28A0A1B0GU29 152 aa14.43□□□□□ -0.1
VMP1-217ENST00000593168 GOLGA6L9A6NEM1 432 aa14.43□□□□□ -0.1
VMP1-217ENST00000593168 MGEA5O60502 916 aa14.43□□□□□ -0.1
VMP1-217ENST00000593168 GPR37L1O60883 481 aa14.43□□□□□ -0.1
VMP1-217ENST00000593168 BAIAP3O94812 1187 aa14.43□□□□□ -0.1
VMP1-217ENST00000593168 IPO7O95373 1038 aaKnown RBP14.43□□□□□ -0.1
VMP1-217ENST00000593168 ITGB3P05106 788 aa14.43□□□□□ -0.1
VMP1-217ENST00000593168 KRT19P08727 400 aa14.43□□□□□ -0.1
VMP1-217ENST00000593168 CYP3A5P20815 502 aa14.43□□□□□ -0.1
VMP1-217ENST00000593168 KIF11P52732 1056 aa14.43□□□□□ -0.1
VMP1-217ENST00000593168 WDR5P61964 334 aaKnown RBP14.43□□□□□ -0.1
VMP1-217ENST00000593168 ZNF699Q32M78 642 aa14.43□□□□□ -0.1
VMP1-217ENST00000593168 TDRD12Q587J7 1177 aaKnown RBP14.43□□□□□ -0.1
VMP1-217ENST00000593168 SCARA3Q6AZY7 606 aa14.43□□□□□ -0.1
VMP1-217ENST00000593168 SPOPLQ6IQ16 392 aa14.43□□□□□ -0.1
VMP1-217ENST00000593168 PGBD4Q96DM1 585 aa14.43□□□□□ -0.1
VMP1-217ENST00000593168 ADAM2Q99965 735 aa14.43□□□□□ -0.1
VMP1-217ENST00000593168 DESI2Q9BSY9 194 aa14.43□□□□□ -0.1
VMP1-217ENST00000593168 FTHL17Q9BXU8 183 aa14.43□□□□□ -0.1
VMP1-217ENST00000593168 NIF3L1Q9GZT8 377 aa14.43□□□□□ -0.1
VMP1-217ENST00000593168 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.43□□□□□ -0.1
VMP1-217ENST00000593168 RGS18Q9NS28 235 aa14.43□□□□□ -0.1
VMP1-217ENST00000593168 TRMT1Q9NXH9 659 aaKnown RBP14.43□□□□□ -0.1
VMP1-217ENST00000593168 USP27XA6NNY8 438 aa14.42□□□□□ -0.1
VMP1-217ENST00000593168 OFD1O75665 1012 aa14.42□□□□□ -0.1
VMP1-217ENST00000593168 PNMA6AP0CW24 399 aaPredicted RBP14.42□□□□□ -0.1
VMP1-217ENST00000593168 ACO1P21399 889 aaKnown RBP14.42□□□□□ -0.1
VMP1-217ENST00000593168 DEFB103AP81534 67 aa14.42□□□□□ -0.1
VMP1-217ENST00000593168 PTK2Q05397 1052 aa14.42□□□□□ -0.1
VMP1-217ENST00000593168 SPA17Q15506 151 aa14.42□□□□□ -0.1
VMP1-217ENST00000593168 TCTN1Q2MV58 587 aa14.42□□□□□ -0.1
VMP1-217ENST00000593168 ZNF667Q5HYK9 610 aa14.42□□□□□ -0.1
VMP1-217ENST00000593168 ZNF571Q7Z3V5 609 aaPredicted RBP14.42□□□□□ -0.1
VMP1-217ENST00000593168 VPS36Q86VN1 386 aa14.42□□□□□ -0.1
VMP1-217ENST00000593168 REXO1L1PQ8IX06 675 aa14.42□□□□□ -0.1
VMP1-217ENST00000593168 IFIH1Q9BYX4 1025 aaKnown RBP14.42□□□□□ -0.1
VMP1-217ENST00000593168 CXCL16Q9H2A7 254 aa14.42□□□□□ -0.1
VMP1-217ENST00000593168 FAM124BQ9H5Z6 455 aaPredicted RBP14.42□□□□□ -0.1
VMP1-217ENST00000593168 UBN1Q9NPG3 1134 aa14.42□□□□□ -0.1
VMP1-217ENST00000593168 KLK14Q9P0G3 267 aa14.42□□□□□ -0.1
VMP1-217ENST00000593168 AGAP1Q9UPQ3 857 aa14.42□□□□□ -0.1
VMP1-217ENST00000593168 CNTN6Q9UQ52 1028 aa14.42□□□□□ -0.1
VMP1-217ENST00000593168 REXO2Q9Y3B8 237 aaKnown RBP14.42□□□□□ -0.1
VMP1-217ENST00000593168 BRWD1Q9NSI6 2320 aa14.41□□□□□ -0.1
VMP1-217ENST00000593168 ANO9A1A5B4 782 aa14.41□□□□□ -0.1
VMP1-217ENST00000593168 NBNO60934 754 aa14.41□□□□□ -0.1
VMP1-217ENST00000593168 POLR2BP30876 1174 aaKnown RBP14.41□□□□□ -0.1
VMP1-217ENST00000593168 CLCN1P35523 988 aa14.41□□□□□ -0.1
VMP1-217ENST00000593168 USP8P40818 1118 aa14.41□□□□□ -0.1
VMP1-217ENST00000593168 BPIFB4P59827 614 aa14.41□□□□□ -0.1
VMP1-217ENST00000593168 YWHAEP62258 255 aaKnown RBP14.41□□□□□ -0.1
VMP1-217ENST00000593168 FAM189BP81408 668 aa14.41□□□□□ -0.1
VMP1-217ENST00000593168 BMS1Q14692 1282 aaKnown RBP14.41□□□□□ -0.1
VMP1-217ENST00000593168 SLC18A3Q16572 532 aa14.41□□□□□ -0.1
VMP1-217ENST00000593168 PLEKHG4Q58EX7 1191 aa14.41□□□□□ -0.1
VMP1-217ENST00000593168 AGMOQ6ZNB7 445 aa14.41□□□□□ -0.1
VMP1-217ENST00000593168 ZNF662Q6ZS27 426 aa14.41□□□□□ -0.1
VMP1-217ENST00000593168 SLC24A5Q71RS6 500 aa14.41□□□□□ -0.1
VMP1-217ENST00000593168 ZNF598Q86UK7 904 aaKnown RBP14.41□□□□□ -0.1
VMP1-217ENST00000593168 RTN4RL1Q86UN2 441 aaPredicted RBP14.41□□□□□ -0.1
VMP1-217ENST00000593168 LRRC52Q8N7C0 313 aa14.41□□□□□ -0.1
VMP1-217ENST00000593168 UBR7Q8N806 425 aa14.41□□□□□ -0.1
VMP1-217ENST00000593168 ACRBPQ8NEB7 543 aa14.41□□□□□ -0.1
VMP1-217ENST00000593168 ELMO3Q96BJ8 720 aa14.41□□□□□ -0.1
VMP1-217ENST00000593168 HPDLQ96IR7 371 aa14.41□□□□□ -0.1
VMP1-217ENST00000593168 PPP1R13BQ96KQ4 1090 aa14.41□□□□□ -0.1
VMP1-217ENST00000593168 SYT11Q9BT88 431 aa14.41□□□□□ -0.1
VMP1-217ENST00000593168 CYP3A43Q9HB55 503 aa14.41□□□□□ -0.1
VMP1-217ENST00000593168 SLC38A7Q9NVC3 462 aa14.41□□□□□ -0.1
VMP1-217ENST00000593168 MTUS1Q9ULD2 1270 aa14.41□□□□□ -0.1
VMP1-217ENST00000593168 PDCD11Q14690 1871 aaKnown RBP14.4□□□□□ -0.1
VMP1-217ENST00000593168 C9IYK1 514 aa14.4□□□□□ -0.1
VMP1-217ENST00000593168 PI4K2BG5E9Z4 385 aa14.4□□□□□ -0.1
VMP1-217ENST00000593168 PIRO00625 290 aa14.4□□□□□ -0.1
VMP1-217ENST00000593168 PTGESO14684 152 aa14.4□□□□□ -0.1
VMP1-217ENST00000593168 ZNF263O14978 683 aa14.4□□□□□ -0.1
VMP1-217ENST00000593168 CYP26A1O43174 497 aa14.4□□□□□ -0.1
VMP1-217ENST00000593168 EOMESO95936 686 aa14.4□□□□□ -0.1
VMP1-217ENST00000593168 P4HA1P13674 534 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms