RNA–Protein interactions for RNA: ENST00000592991.1

LDLRAD4-218, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 1,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-218ENST00000592991 CRIPAKQ8N1N5 446 aa27.36■■□□□ 1.97
LDLRAD4-218ENST00000592991 TMEM199Q8N511 208 aa27.36■■□□□ 1.97
LDLRAD4-218ENST00000592991 URGCPQ8TCY9 931 aa27.36■■□□□ 1.97
LDLRAD4-218ENST00000592991 MRPL45Q9BRJ2 306 aaKnown RBP27.36■■□□□ 1.97
LDLRAD4-218ENST00000592991 TBC1D13Q9NVG8 400 aa27.36■■□□□ 1.97
LDLRAD4-218ENST00000592991 HCSTQ9UBK5 93 aa27.36■■□□□ 1.97
LDLRAD4-218ENST00000592991 NOCTQ9UK39 431 aaKnown RBP27.36■■□□□ 1.97
LDLRAD4-218ENST00000592991 CCDC172P0C7W6 258 aa27.35■■□□□ 1.97
LDLRAD4-218ENST00000592991 ZNF132P52740 706 aa27.35■■□□□ 1.97
LDLRAD4-218ENST00000592991 LILRA4P59901 499 aa27.35■■□□□ 1.97
LDLRAD4-218ENST00000592991 TUSC3Q13454 348 aa27.35■■□□□ 1.97
LDLRAD4-218ENST00000592991 FMNL3Q8IVF7 1028 aa27.35■■□□□ 1.97
LDLRAD4-218ENST00000592991 GLYCTKQ8IVS8 523 aa27.35■■□□□ 1.97
LDLRAD4-218ENST00000592991 TWNKQ96RR1 684 aa27.35■■□□□ 1.97
LDLRAD4-218ENST00000592991 CNTN6Q9UQ52 1028 aa27.35■■□□□ 1.97
LDLRAD4-218ENST00000592991 KPNA7A9QM74 516 aa27.34■■□□□ 1.97
LDLRAD4-218ENST00000592991 EIF3CLB5ME19 914 aaKnown RBP27.34■■□□□ 1.97
LDLRAD4-218ENST00000592991 F8W810 466 aa27.34■■□□□ 1.97
LDLRAD4-218ENST00000592991 DDX3XO00571 662 aaKnown RBP eCLIP27.34■■□□□ 1.97
LDLRAD4-218ENST00000592991 CHRNB2P17787 502 aa27.34■■□□□ 1.97
LDLRAD4-218ENST00000592991 SSTR3P32745 418 aaPredicted RBP27.34■■□□□ 1.97
LDLRAD4-218ENST00000592991 PNPLA4P41247 253 aa27.34■■□□□ 1.97
LDLRAD4-218ENST00000592991 UPP1Q16831 310 aa27.34■■□□□ 1.97
LDLRAD4-218ENST00000592991 SV2CQ496J9 727 aa27.34■■□□□ 1.97
LDLRAD4-218ENST00000592991 FNDC1Q4ZHG4 1894 aaPredicted RBP27.34■■□□□ 1.97
LDLRAD4-218ENST00000592991 COL13A1Q5TAT6 717 aaPredicted RBP27.34■■□□□ 1.97
LDLRAD4-218ENST00000592991 TMCO2Q7Z6W1 182 aaPredicted RBP27.34■■□□□ 1.97
LDLRAD4-218ENST00000592991 PALB2Q86YC2 1186 aa27.34■■□□□ 1.97
LDLRAD4-218ENST00000592991 RPUSD2Q8IZ73 545 aaKnown RBP27.34■■□□□ 1.97
LDLRAD4-218ENST00000592991 ABI1Q8IZP0 508 aa27.34■■□□□ 1.97
LDLRAD4-218ENST00000592991 HASPINQ8TF76 798 aa27.34■■□□□ 1.97
LDLRAD4-218ENST00000592991 CASD1Q96PB1 797 aa27.34■■□□□ 1.97
LDLRAD4-218ENST00000592991 EIF3CQ99613 913 aaKnown RBP27.34■■□□□ 1.97
LDLRAD4-218ENST00000592991 AGPAT1Q99943 283 aa27.34■■□□□ 1.97
LDLRAD4-218ENST00000592991 SEPT11Q9NVA2 429 aaKnown RBP27.34■■□□□ 1.97
LDLRAD4-218ENST00000592991 MMEP08473 750 aa27.34■■□□□ 1.97
LDLRAD4-218ENST00000592991 PDE6CP51160 858 aa27.34■■□□□ 1.97
LDLRAD4-218ENST00000592991 NPAS4Q8IUM7 802 aa27.34■■□□□ 1.97
LDLRAD4-218ENST00000592991 WHAMMQ8TF30 809 aa27.34■■□□□ 1.97
LDLRAD4-218ENST00000592991 BADQ92934 168 aa27.34■■□□□ 1.97
LDLRAD4-218ENST00000592991 CYP3A43Q9HB55 503 aa27.34■■□□□ 1.97
LDLRAD4-218ENST00000592991 NME7Q9Y5B8 376 aa27.34■■□□□ 1.97
LDLRAD4-218ENST00000592991 HCRTO43612 131 aa27.33■■□□□ 1.97
LDLRAD4-218ENST00000592991 RNASELQ05823 741 aaKnown RBP27.33■■□□□ 1.97
LDLRAD4-218ENST00000592991 SOWAHAQ2M3V2 549 aa27.33■■□□□ 1.97
LDLRAD4-218ENST00000592991 PPP1R13BQ96KQ4 1090 aa27.33■■□□□ 1.97
LDLRAD4-218ENST00000592991 ELOVL4Q9GZR5 314 aa27.33■■□□□ 1.97
LDLRAD4-218ENST00000592991 DNAJB4Q9UDY4 337 aa27.33■■□□□ 1.97
LDLRAD4-218ENST00000592991 PRKAG2Q9UGJ0 569 aa27.33■■□□□ 1.97
LDLRAD4-218ENST00000592991 PUF60Q9UHX1 559 aaKnown RBP27.33■■□□□ 1.97
LDLRAD4-218ENST00000592991 CILPO75339 1184 aa27.32■■□□□ 1.96
LDLRAD4-218ENST00000592991 CCDC175P0C221 793 aa27.32■■□□□ 1.96
LDLRAD4-218ENST00000592991 SYN1P17600 705 aa27.32■■□□□ 1.96
LDLRAD4-218ENST00000592991 GNA15P30679 374 aa27.32■■□□□ 1.96
LDLRAD4-218ENST00000592991 YWHAEP62258 255 aaKnown RBP27.32■■□□□ 1.96
LDLRAD4-218ENST00000592991 DEFB103AP81534 67 aa27.32■■□□□ 1.96
LDLRAD4-218ENST00000592991 SLC18A3Q16572 532 aa27.32■■□□□ 1.96
LDLRAD4-218ENST00000592991 DDX1Q92499 740 aaKnown RBP27.32■■□□□ 1.96
LDLRAD4-218ENST00000592991 FAXDC2Q96IV6 333 aa27.32■■□□□ 1.96
LDLRAD4-218ENST00000592991 GDAP2Q9NXN4 497 aa27.32■■□□□ 1.96
LDLRAD4-218ENST00000592991 L1RE1Q9UN81 338 aa27.32■■□□□ 1.96
LDLRAD4-218ENST00000592991 TBKBP1A7MCY6 615 aa27.31■■□□□ 1.96
LDLRAD4-218ENST00000592991 I3L4J1 428 aa27.31■■□□□ 1.96
LDLRAD4-218ENST00000592991 LCA5LO95447 670 aa27.31■■□□□ 1.96
LDLRAD4-218ENST00000592991 ITGB1P05556 798 aa27.31■■□□□ 1.96
LDLRAD4-218ENST00000592991 TNFAIP3P21580 790 aa27.31■■□□□ 1.96
LDLRAD4-218ENST00000592991 RPL9P32969 192 aaKnown RBP27.31■■□□□ 1.96
LDLRAD4-218ENST00000592991 NDST1P52848 882 aa27.31■■□□□ 1.96
LDLRAD4-218ENST00000592991 FMO1Q01740 532 aa27.31■■□□□ 1.96
LDLRAD4-218ENST00000592991 DSC1Q08554 894 aa27.31■■□□□ 1.96
LDLRAD4-218ENST00000592991 CD300LGQ6UXG3 332 aa27.31■■□□□ 1.96
LDLRAD4-218ENST00000592991 REXO1L1PQ8IX06 675 aa27.31■■□□□ 1.96
LDLRAD4-218ENST00000592991 PCDHB18PQ96TA0 734 aa27.31■■□□□ 1.96
LDLRAD4-218ENST00000592991 IL23AQ9NPF7 189 aa27.31■■□□□ 1.96
LDLRAD4-218ENST00000592991 TMCO5BA8MYB1 307 aa27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 B3GAT3O94766 335 aa27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 CFHP08603 1231 aa27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 BRD2P25440 801 aaKnown RBP27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 RAD23BP54727 409 aa27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 FAM117BQ6P1L5 589 aa27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 C16orf59Q7L2K0 433 aa27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 OTOP2Q7RTS6 562 aa27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 VPS36Q86VN1 386 aa27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 COLGALT2Q8IYK4 626 aa27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 SLC30A5Q8TAD4 765 aa27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 KBTBD7Q8WVZ9 684 aa27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 ZSWIM1Q9BR11 485 aa27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 PTPRSQ13332 1948 aa27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 COL4A6Q14031 1691 aa27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 ABHD14A-ACY1A0A1B0GW23 586 aa27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 RCCD1A6NED2 376 aa27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 CYB561D2O14569 222 aa27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 KIF4AO95239 1232 aa27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 BRCC3P46736 316 aa27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 INCA1Q0VD86 236 aa27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 BMS1Q14692 1282 aaKnown RBP27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 SPA17Q15506 151 aa27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 FAM43BQ6ZT52 329 aaPredicted RBP27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 ABHD8Q96I13 439 aa27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 TAS2R14Q9NYV8 317 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms