RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 CYP26B1Q9NR63 512 aa8.55□□□□□ -1.04
VMP1-213ENST00000591877 SNX14Q9Y5W7 946 aa8.55□□□□□ -1.04
VMP1-213ENST00000591877 PRUNE2Q8WUY3 3088 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 FIBPO43427 364 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 STAM2O75886 525 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 LGALS2P05162 132 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 PFKMP08237 780 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 NFICP08651 508 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 CKBP12277 381 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 HOXC8P31273 242 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 RFC2P35250 354 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 KIR3DL1P43629 444 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 BFSP2Q13515 415 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 DHCR24Q15392 516 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 XRRA1Q6P2D8 792 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 CNNM4Q6P4Q7 775 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 METTL7BQ6UX53 244 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 SEZ6L2Q6UXD5 910 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 FIBCD1Q8N539 461 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 C7orf31Q8N865 590 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 MAFAQ8NHW3 353 aaPredicted RBP8.54□□□□□ -1.04
VMP1-213ENST00000591877 SLC7A14Q8TBB6 771 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 CAGE1Q8TC20 777 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 CUL5Q93034 780 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 GPR20Q99678 358 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 KATNAL1Q9BW62 490 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 LGR4Q9BXB1 951 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 FAM126AQ9BYI3 521 aaPredicted RBP8.54□□□□□ -1.04
VMP1-213ENST00000591877 PRDM14Q9GZV8 571 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 NDOR1Q9UHB4 597 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 PCDHA6Q9UN73 950 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 PCDHA8Q9Y5H6 950 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 UBIAD1Q9Y5Z9 338 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 SLC4A7Q9Y6M7 1214 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 CUL9Q8IWT3 2517 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 MICAL3Q7RTP6 2002 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 REV3LO60673 3130 aa8.54□□□□□ -1.04
VMP1-213ENST00000591877 KLF18A0A0U1RQI7 1052 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 ADAMTS3O15072 1205 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 ZBTB43O43298 467 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 SIGLEC6O43699 453 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 NBNO60934 754 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 CXCL10P02778 98 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 FOSL2P15408 326 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 KCNA2P16389 499 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 ATP2A2P16615 1042 aaKnown RBP8.53□□□□□ -1.04
VMP1-213ENST00000591877 NAT1P18440 290 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 IGFALSP35858 605 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 FLT3P36888 993 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 AMPD2Q01433 879 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 BNIP3Q12983 259 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 NEDD9Q14511 834 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 KRT32Q14532 448 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 RAB30Q15771 203 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 SLC35F1Q5T1Q4 408 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 ZNF618Q5T7W0 954 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 LCE5AQ5TCM9 118 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 SYNE3Q6ZMZ3 975 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 Q6ZUG5 572 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 LRRC8DQ7L1W4 858 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 HEATR3Q7Z4Q2 680 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 AFAP1L1Q8TED9 768 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 C1orf159Q96HA4 380 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 SLC38A3Q99624 504 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 SENP7Q9BQF6 1050 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 MTIF3Q9H2K0 278 aaKnown RBP8.53□□□□□ -1.04
VMP1-213ENST00000591877 RNPEPQ9H4A4 650 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 PRDM12Q9H4Q4 367 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 NOL6Q9H6R4 1146 aaKnown RBP8.53□□□□□ -1.04
VMP1-213ENST00000591877 RBM28Q9NW13 759 aaKnown RBP8.53□□□□□ -1.04
VMP1-213ENST00000591877 MSRAQ9UJ68 235 aa8.53□□□□□ -1.04
VMP1-213ENST00000591877 WDR81Q562E7 1941 aa8.52□□□□□ -1.04
VMP1-213ENST00000591877 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.52□□□□□ -1.05
VMP1-213ENST00000591877 GSTTP1A0A1W2PQM5 241 aa8.52□□□□□ -1.05
VMP1-213ENST00000591877 GOLGA8AA7E2F4 631 aa8.52□□□□□ -1.05
VMP1-213ENST00000591877 GOLGA8BA8MQT2 603 aa8.52□□□□□ -1.05
VMP1-213ENST00000591877 STXBP3O00186 592 aa8.52□□□□□ -1.05
VMP1-213ENST00000591877 EYA4O95677 639 aa8.52□□□□□ -1.05
VMP1-213ENST00000591877 SMIM10L2AP0DMW4 78 aa8.52□□□□□ -1.05
VMP1-213ENST00000591877 SMIM10L2BP0DMW5 78 aa8.52□□□□□ -1.05
VMP1-213ENST00000591877 ACTN1P12814 892 aa8.52□□□□□ -1.05
VMP1-213ENST00000591877 ITIH2P19823 946 aa8.52□□□□□ -1.05
VMP1-213ENST00000591877 RCAN1P53805 252 aa8.52□□□□□ -1.05
VMP1-213ENST00000591877 ADAM17P78536 824 aa8.52□□□□□ -1.05
VMP1-213ENST00000591877 SP4Q02446 784 aa8.52□□□□□ -1.05
VMP1-213ENST00000591877 C22orf34Q6ZV56 151 aa8.52□□□□□ -1.05
VMP1-213ENST00000591877 TMCO2Q7Z6W1 182 aaPredicted RBP8.52□□□□□ -1.05
VMP1-213ENST00000591877 NLRX1Q86UT6 975 aa8.52□□□□□ -1.05
VMP1-213ENST00000591877 SERINC5Q86VE9 423 aa8.52□□□□□ -1.05
VMP1-213ENST00000591877 USP38Q8NB14 1042 aa8.52□□□□□ -1.05
VMP1-213ENST00000591877 CYP2W1Q8TAV3 490 aa8.52□□□□□ -1.05
VMP1-213ENST00000591877 ENOX1Q8TC92 643 aaKnown RBP8.52□□□□□ -1.05
VMP1-213ENST00000591877 BRF1Q92994 677 aa8.52□□□□□ -1.05
VMP1-213ENST00000591877 PGBD1Q96JS3 809 aa8.52□□□□□ -1.05
VMP1-213ENST00000591877 JAKMIP1Q96N16 626 aaKnown RBP8.52□□□□□ -1.05
VMP1-213ENST00000591877 AGXT2Q9BYV1 514 aa8.52□□□□□ -1.05
VMP1-213ENST00000591877 FTOQ9C0B1 505 aaKnown RBP eCLIP8.52□□□□□ -1.05
VMP1-213ENST00000591877 SLC28A3Q9HAS3 691 aa8.52□□□□□ -1.05
VMP1-213ENST00000591877 RIC8AQ9NPQ8 531 aa8.52□□□□□ -1.05
VMP1-213ENST00000591877 KCNH3Q9ULD8 1083 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms