RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 ECM1Q16610 540 aa18.91■□□□□ 0.62
RETREG3-210ENST00000590541 ARHGAP29Q52LW3 1261 aa18.91■□□□□ 0.62
RETREG3-210ENST00000590541 GAREM2Q75VX8 874 aa18.91■□□□□ 0.62
RETREG3-210ENST00000590541 CACNA2D4Q7Z3S7 1137 aa18.91■□□□□ 0.62
RETREG3-210ENST00000590541 TMEM130Q8N3G9 435 aa18.91■□□□□ 0.62
RETREG3-210ENST00000590541 PGLYRP2Q96PD5 576 aa18.91■□□□□ 0.62
RETREG3-210ENST00000590541 TARS2Q9BW92 718 aaKnown RBP18.91■□□□□ 0.62
RETREG3-210ENST00000590541 CCDC163A0A0D9SF12 145 aa18.9■□□□□ 0.62
RETREG3-210ENST00000590541 MCF2P10911 925 aa18.9■□□□□ 0.62
RETREG3-210ENST00000590541 CACNB1Q02641 598 aaPredicted RBP18.9■□□□□ 0.62
RETREG3-210ENST00000590541 TNK2Q07912 1038 aa18.9■□□□□ 0.62
RETREG3-210ENST00000590541 DUSP4Q13115 394 aa18.9■□□□□ 0.62
RETREG3-210ENST00000590541 GNL2Q13823 731 aaKnown RBP18.9■□□□□ 0.62
RETREG3-210ENST00000590541 COL9A2Q14055 689 aaPredicted RBP18.9■□□□□ 0.62
RETREG3-210ENST00000590541 ERMNQ8TAM6 284 aa18.9■□□□□ 0.62
RETREG3-210ENST00000590541 MRPL4Q9BYD3 311 aaKnown RBP18.9■□□□□ 0.62
RETREG3-210ENST00000590541 BHMT2Q9H2M3 363 aa18.9■□□□□ 0.62
RETREG3-210ENST00000590541 TMEM134Q9H6X4 195 aa18.9■□□□□ 0.62
RETREG3-210ENST00000590541 OBP2AQ9NY56 170 aa18.9■□□□□ 0.62
RETREG3-210ENST00000590541 TUBGCP4Q9UGJ1 667 aa18.9■□□□□ 0.62
RETREG3-210ENST00000590541 TIMM13Q9Y5L4 95 aaPredicted RBP18.9■□□□□ 0.62
RETREG3-210ENST00000590541 SDK1Q7Z5N4 2213 aa18.89■□□□□ 0.61
RETREG3-210ENST00000590541 NUP210Q8TEM1 1887 aaPredicted RBP18.89■□□□□ 0.61
RETREG3-210ENST00000590541 CCDC169A6NNP5 214 aa18.89■□□□□ 0.61
RETREG3-210ENST00000590541 C1QTNF9BB2RNN3 333 aa18.89■□□□□ 0.61
RETREG3-210ENST00000590541 M0QZQ0 153 aa18.89■□□□□ 0.61
RETREG3-210ENST00000590541 DPYSL4O14531 572 aa18.89■□□□□ 0.61
RETREG3-210ENST00000590541 OAZ2O95190 189 aa18.89■□□□□ 0.61
RETREG3-210ENST00000590541 C1QTNF9P0C862 333 aa18.89■□□□□ 0.61
RETREG3-210ENST00000590541 MUTP22033 750 aa18.89■□□□□ 0.61
RETREG3-210ENST00000590541 MARCKSP29966 332 aaPredicted RBP18.89■□□□□ 0.61
RETREG3-210ENST00000590541 NPTX2P47972 431 aa18.89■□□□□ 0.61
RETREG3-210ENST00000590541 EPHB3P54753 998 aa18.89■□□□□ 0.61
RETREG3-210ENST00000590541 GUCY1B3Q02153 619 aa18.89■□□□□ 0.61
RETREG3-210ENST00000590541 YWHAHQ04917 246 aaPredicted RBP18.89■□□□□ 0.61
RETREG3-210ENST00000590541 PLD1Q13393 1074 aa18.89■□□□□ 0.61
RETREG3-210ENST00000590541 ARHGAP28Q9P2N2 729 aa18.89■□□□□ 0.61
RETREG3-210ENST00000590541 NOL7Q9UMY1 257 aaKnown RBP18.89■□□□□ 0.61
RETREG3-210ENST00000590541 PCDHGA5Q9Y5G8 931 aa18.89■□□□□ 0.61
RETREG3-210ENST00000590541 BAHCC1Q9P281 2608 aa18.89■□□□□ 0.61
RETREG3-210ENST00000590541 CITO14578 2027 aa18.88■□□□□ 0.61
RETREG3-210ENST00000590541 PRAMEF12O95522 483 aa18.88■□□□□ 0.61
RETREG3-210ENST00000590541 CCDC192P0DO97 292 aa18.88■□□□□ 0.61
RETREG3-210ENST00000590541 MPLP40238 635 aa18.88■□□□□ 0.61
RETREG3-210ENST00000590541 MCM2P49736 904 aa18.88■□□□□ 0.61
RETREG3-210ENST00000590541 PEX3P56589 373 aa18.88■□□□□ 0.61
RETREG3-210ENST00000590541 GPR17Q13304 367 aa18.88■□□□□ 0.61
RETREG3-210ENST00000590541 SLC10A6Q3KNW5 377 aa18.88■□□□□ 0.61
RETREG3-210ENST00000590541 PSAPL1Q6NUJ1 521 aa18.88■□□□□ 0.61
RETREG3-210ENST00000590541 MPZL3Q6UWV2 235 aa18.88■□□□□ 0.61
RETREG3-210ENST00000590541 HAUS6Q7Z4H7 955 aa18.88■□□□□ 0.61
RETREG3-210ENST00000590541 DAW1Q8N136 415 aa18.88■□□□□ 0.61
RETREG3-210ENST00000590541 ZBTB45Q96K62 511 aaPredicted RBP18.88■□□□□ 0.61
RETREG3-210ENST00000590541 ZC3H10Q96K80 434 aaKnown RBP18.88■□□□□ 0.61
RETREG3-210ENST00000590541 TCHPQ9BT92 498 aa18.88■□□□□ 0.61
RETREG3-210ENST00000590541 ATXN3LQ9H3M9 355 aa18.88■□□□□ 0.61
RETREG3-210ENST00000590541 ZMIZ1Q9ULJ6 1067 aa18.88■□□□□ 0.61
RETREG3-210ENST00000590541 KIF26AQ9ULI4 1882 aaPredicted RBP18.88■□□□□ 0.61
RETREG3-210ENST00000590541 OR52Z1P0C646 297 aa18.87■□□□□ 0.61
RETREG3-210ENST00000590541 HARSP12081 509 aaKnown RBP18.87■□□□□ 0.61
RETREG3-210ENST00000590541 HOXB3P14651 431 aaPredicted RBP18.87■□□□□ 0.61
RETREG3-210ENST00000590541 U2AF2P26368 475 aaKnown RBP eCLIP18.87■□□□□ 0.611e-14■■■■■ 32
RETREG3-210ENST00000590541 ALDH1A3P47895 512 aa18.87■□□□□ 0.61
RETREG3-210ENST00000590541 SEZ6Q53EL9 994 aa18.87■□□□□ 0.61
RETREG3-210ENST00000590541 GPR158Q5T848 1215 aa18.87■□□□□ 0.61
RETREG3-210ENST00000590541 RNF43Q68DV7 783 aa18.87■□□□□ 0.61
RETREG3-210ENST00000590541 CENPPQ6IPU0 288 aa18.87■□□□□ 0.61
RETREG3-210ENST00000590541 TCEAL6Q6IPX3 200 aa18.87■□□□□ 0.61
RETREG3-210ENST00000590541 SPAG17Q6Q759 2223 aa18.87■□□□□ 0.61
RETREG3-210ENST00000590541 UNQ6494/PRO21346Q6UXR6 183 aa18.87■□□□□ 0.61
RETREG3-210ENST00000590541 DNAJB7Q7Z6W7 309 aaPredicted RBP18.87■□□□□ 0.61
RETREG3-210ENST00000590541 BPIFB1Q8TDL5 484 aa18.87■□□□□ 0.61
RETREG3-210ENST00000590541 TCEAL3Q969E4 200 aa18.87■□□□□ 0.61
RETREG3-210ENST00000590541 PSMG2Q969U7 264 aa18.87■□□□□ 0.61
RETREG3-210ENST00000590541 TMEM209Q96SK2 561 aa18.87■□□□□ 0.61
RETREG3-210ENST00000590541 OXCT2Q9BYC2 517 aaPredicted RBP18.87■□□□□ 0.61
RETREG3-210ENST00000590541 VPS45Q9NRW7 570 aa18.87■□□□□ 0.61
RETREG3-210ENST00000590541 SLC27A5Q9Y2P5 690 aa18.87■□□□□ 0.61
RETREG3-210ENST00000590541 FAM208BQ5VWN6 2430 aa18.86■□□□□ 0.61
RETREG3-210ENST00000590541 EML5Q05BV3 1969 aa18.86■□□□□ 0.61
RETREG3-210ENST00000590541 MTMR11A4FU01 709 aa18.86■□□□□ 0.61
RETREG3-210ENST00000590541 AKAP3O75969 853 aa18.86■□□□□ 0.61
RETREG3-210ENST00000590541 GABRR2P28476 465 aa18.86■□□□□ 0.61
RETREG3-210ENST00000590541 WEE1P30291 646 aa18.86■□□□□ 0.61
RETREG3-210ENST00000590541 CCT6AP40227 531 aaKnown RBP18.86■□□□□ 0.61
RETREG3-210ENST00000590541 AARSP49588 968 aaKnown RBP eCLIP18.86■□□□□ 0.61
RETREG3-210ENST00000590541 PLCB2Q00722 1185 aa18.86■□□□□ 0.61
RETREG3-210ENST00000590541 ITPRIPL2Q3MIP1 535 aa18.86■□□□□ 0.61
RETREG3-210ENST00000590541 TTC38Q5R3I4 469 aa18.86■□□□□ 0.61
RETREG3-210ENST00000590541 HAUS3Q68CZ6 603 aa18.86■□□□□ 0.61
RETREG3-210ENST00000590541 FSTL4Q6MZW2 842 aa18.86■□□□□ 0.61
RETREG3-210ENST00000590541 TTC9BQ8N6N2 239 aa18.86■□□□□ 0.61
RETREG3-210ENST00000590541 ATAD1Q8NBU5 361 aa18.86■□□□□ 0.61
RETREG3-210ENST00000590541 CHFRQ96EP1 664 aa18.86■□□□□ 0.61
RETREG3-210ENST00000590541 POLR3BQ9NW08 1133 aaPredicted RBP18.86■□□□□ 0.61
RETREG3-210ENST00000590541 ASB3Q9Y575 518 aa18.86■□□□□ 0.61
RETREG3-210ENST00000590541 STK24Q9Y6E0 443 aa18.86■□□□□ 0.61
RETREG3-210ENST00000590541 CEP295Q9C0D2 2601 aa18.85■□□□□ 0.61
RETREG3-210ENST00000590541 OR6C75A6NL08 312 aa18.85■□□□□ 0.61
RETREG3-210ENST00000590541 GIPC1O14908 333 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms