RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 ZWINTO95229 277 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 LYNP07948 512 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 KRT10P13645 584 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 ETS2P15036 469 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 SSR1P43307 286 aaKnown RBP16.66■□□□□ 0.26
MBD1-222ENST00000590208 SLC18A1P54219 525 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 USP4Q13107 963 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 IKQ13123 557 aaPredicted RBP16.66■□□□□ 0.26
MBD1-222ENST00000590208 GRAPQ13588 217 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 SPDYAQ5MJ70 313 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 KAZNQ674X7 775 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 TDRPQ86YL5 185 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 BBOF1Q8ND07 529 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 FBXO27Q8NI29 283 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 GRAPLQ8TC17 118 aaPredicted RBP16.66■□□□□ 0.26
MBD1-222ENST00000590208 TCP10LQ8TDR4 215 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 BICD1Q96G01 975 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 TUBGCP5Q96RT8 1024 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 OSBPL8Q9BZF1 889 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 G3BP2Q9UN86 482 aaKnown RBP16.66■□□□□ 0.26
MBD1-222ENST00000590208 ADRB2P07550 413 aa16.65■□□□□ 0.26
MBD1-222ENST00000590208 CYP3A4P08684 503 aa16.65■□□□□ 0.26
MBD1-222ENST00000590208 CIITAP33076 1130 aa16.65■□□□□ 0.26
MBD1-222ENST00000590208 RBM5P52756 815 aaKnown RBP eCLIP16.65■□□□□ 0.26
MBD1-222ENST00000590208 CENPCQ03188 943 aa16.65■□□□□ 0.26
MBD1-222ENST00000590208 CNPY1Q3B7I2 92 aa16.65■□□□□ 0.26
MBD1-222ENST00000590208 ATP13A4Q4VNC1 1196 aa16.65■□□□□ 0.26
MBD1-222ENST00000590208 TRMT1LQ7Z2T5 733 aaKnown RBP16.65■□□□□ 0.26
MBD1-222ENST00000590208 STRA6Q9BX79 667 aa16.65■□□□□ 0.26
MBD1-222ENST00000590208 HSPBP1Q9NZL4 362 aa16.65■□□□□ 0.26
MBD1-222ENST00000590208 DNPEPQ9ULA0 475 aa16.65■□□□□ 0.26
MBD1-222ENST00000590208 USTQ9Y2C2 406 aa16.65■□□□□ 0.26
MBD1-222ENST00000590208 PI4K2BG5E9Z4 385 aa16.65■□□□□ 0.26
MBD1-222ENST00000590208 MCL1Q07820 350 aa16.65■□□□□ 0.26
MBD1-222ENST00000590208 TUFT1Q9NNX1 390 aa16.65■□□□□ 0.26
MBD1-222ENST00000590208 TOPORSQ9NS56 1045 aaPredicted RBP16.65■□□□□ 0.26
MBD1-222ENST00000590208 UBE4BO95155 1302 aa16.64■□□□□ 0.25
MBD1-222ENST00000590208 C6orf229H3BNL8 230 aa16.64■□□□□ 0.25
MBD1-222ENST00000590208 ESRRAP11474 423 aaPredicted RBP16.64■□□□□ 0.25
MBD1-222ENST00000590208 KRT5P13647 590 aa16.64■□□□□ 0.25
MBD1-222ENST00000590208 SSTR3P32745 418 aaPredicted RBP16.64■□□□□ 0.25
MBD1-222ENST00000590208 ARFIP2P53365 341 aa16.64■□□□□ 0.25
MBD1-222ENST00000590208 GAD2Q05329 585 aa16.64■□□□□ 0.25
MBD1-222ENST00000590208 GPS1Q13098 491 aa16.64■□□□□ 0.25
MBD1-222ENST00000590208 SEPT7Q16181 437 aaKnown RBP16.64■□□□□ 0.25
MBD1-222ENST00000590208 AMIGO3Q86WK7 504 aa16.64■□□□□ 0.25
MBD1-222ENST00000590208 FBXO11Q86XK2 927 aa16.64■□□□□ 0.25
MBD1-222ENST00000590208 HELQQ8TDG4 1101 aa16.64■□□□□ 0.25
MBD1-222ENST00000590208 ITFG2Q969R8 447 aa16.64■□□□□ 0.25
MBD1-222ENST00000590208 TMEM120AQ9BXJ8 343 aa16.64■□□□□ 0.25
MBD1-222ENST00000590208 KCNK13Q9HB14 408 aa16.64■□□□□ 0.25
MBD1-222ENST00000590208 STK24Q9Y6E0 443 aa16.64■□□□□ 0.25
MBD1-222ENST00000590208 ARSEP51690 589 aa16.64■□□□□ 0.25
MBD1-222ENST00000590208 MFAP3P55082 362 aa16.64■□□□□ 0.25
MBD1-222ENST00000590208 GTF2IP78347 998 aa16.64■□□□□ 0.25
MBD1-222ENST00000590208 CLEC16AQ2KHT3 1053 aa16.64■□□□□ 0.25
MBD1-222ENST00000590208 ZFPM1Q8IX07 1006 aa16.64■□□□□ 0.25
MBD1-222ENST00000590208 FAM161BQ96MY7 647 aa16.64■□□□□ 0.25
MBD1-222ENST00000590208 NDNQ99608 321 aa16.64■□□□□ 0.25
MBD1-222ENST00000590208 TRIM55Q9BYV6 548 aa16.64■□□□□ 0.25
MBD1-222ENST00000590208 MANSC1Q9H8J5 431 aa16.64■□□□□ 0.25
MBD1-222ENST00000590208 LMCD1Q9NZU5 365 aa16.64■□□□□ 0.25
MBD1-222ENST00000590208 SENP1Q9P0U3 644 aa16.64■□□□□ 0.25
MBD1-222ENST00000590208 HNRNPCL1O60812 293 aaKnown RBP16.63■□□□□ 0.25
MBD1-222ENST00000590208 PSMD10O75832 226 aa16.63■□□□□ 0.25
MBD1-222ENST00000590208 SSTR1P30872 391 aa16.63■□□□□ 0.25
MBD1-222ENST00000590208 PGM1P36871 562 aa16.63■□□□□ 0.25
MBD1-222ENST00000590208 RTP1P59025 263 aa16.63■□□□□ 0.25
MBD1-222ENST00000590208 PDIA2Q13087 525 aaKnown RBP16.63■□□□□ 0.25
MBD1-222ENST00000590208 IZUMO2Q6UXV1 221 aa16.63■□□□□ 0.25
MBD1-222ENST00000590208 CBWD2Q8IUF1 395 aa16.63■□□□□ 0.25
MBD1-222ENST00000590208 MCOLN2Q8IZK6 566 aa16.63■□□□□ 0.25
MBD1-222ENST00000590208 XXYLT1Q8NBI6 393 aa16.63■□□□□ 0.25
MBD1-222ENST00000590208 FAM81AQ8TBF8 368 aa16.63■□□□□ 0.25
MBD1-222ENST00000590208 AZIN2Q96A70 460 aa16.63■□□□□ 0.25
MBD1-222ENST00000590208 CLPTM1LQ96KA5 538 aa16.63■□□□□ 0.25
MBD1-222ENST00000590208 PDP2Q9P2J9 529 aa16.63■□□□□ 0.25
MBD1-222ENST00000590208 PSMC3IPQ9P2W1 217 aaPredicted RBP16.63■□□□□ 0.25
MBD1-222ENST00000590208 NARFQ9UHQ1 456 aa16.63■□□□□ 0.25
MBD1-222ENST00000590208 ZNF148Q9UQR1 794 aa16.63■□□□□ 0.25
MBD1-222ENST00000590208 DNALI1O14645 258 aaPredicted RBP16.63■□□□□ 0.25
MBD1-222ENST00000590208 IL1R1P14778 569 aa16.63■□□□□ 0.25
MBD1-222ENST00000590208 LRRC23Q53EV4 343 aaPredicted RBP16.63■□□□□ 0.25
MBD1-222ENST00000590208 VTI1AQ96AJ9 217 aa16.63■□□□□ 0.25
MBD1-222ENST00000590208 PI4K2AQ9BTU6 479 aa16.63■□□□□ 0.25
MBD1-222ENST00000590208 DMAP1Q9NPF5 467 aaPredicted RBP16.63■□□□□ 0.25
MBD1-222ENST00000590208 ARHGEF35A5YM69 484 aa16.63■□□□□ 0.25
MBD1-222ENST00000590208 P4HA2O15460 535 aa16.63■□□□□ 0.25
MBD1-222ENST00000590208 USP1O94782 785 aa16.63■□□□□ 0.25
MBD1-222ENST00000590208 SPATA31D3P0C874 917 aa16.63■□□□□ 0.25
MBD1-222ENST00000590208 GPX6P59796 221 aa16.63■□□□□ 0.25
MBD1-222ENST00000590208 LMNB2Q03252 620 aa16.63■□□□□ 0.25
MBD1-222ENST00000590208 ZRSR2Q15696 482 aaKnown RBP16.63■□□□□ 0.25
MBD1-222ENST00000590208 MDH1BQ5I0G3 518 aa16.63■□□□□ 0.25
MBD1-222ENST00000590208 SPATA31D4Q6ZUB0 917 aa16.63■□□□□ 0.25
MBD1-222ENST00000590208 SLF2Q8IX21 1173 aa16.63■□□□□ 0.25
MBD1-222ENST00000590208 TAB3Q8N5C8 712 aaPredicted RBP16.63■□□□□ 0.25
MBD1-222ENST00000590208 ZNF398Q8TD17 642 aa16.63■□□□□ 0.25
MBD1-222ENST00000590208 TAS1R2Q8TE23 839 aa16.63■□□□□ 0.25
MBD1-222ENST00000590208 SKA1Q96BD8 255 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms