RNA–Protein interactions for RNA: ENST00000589697.1

RAB8A-205, Transcript of RAB8A, member RAS oncogene family, human

TSL 1 (best)

Gene RAB8A, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB8A-205	ENST00000589697	XKR4	Q5GH76	650 aa		13.64	□□□□□ -0.23
RAB8A-205	ENST00000589697	LHX8	Q68G74	356 aa		13.64	□□□□□ -0.23
RAB8A-205	ENST00000589697	PASD1	Q8IV76	773 aa		13.64	□□□□□ -0.23
RAB8A-205	ENST00000589697	MCOLN2	Q8IZK6	566 aa		13.64	□□□□□ -0.23
RAB8A-205	ENST00000589697	TMEM130	Q8N3G9	435 aa		13.64	□□□□□ -0.23
RAB8A-205	ENST00000589697	SMG8	Q8ND04	991 aa	Known RBP	13.64	□□□□□ -0.23
RAB8A-205	ENST00000589697	ZNF564	Q8TBZ8	553 aa	Predicted RBP	13.64	□□□□□ -0.23
RAB8A-205	ENST00000589697	COG1	Q8WTW3	980 aa		13.64	□□□□□ -0.23
RAB8A-205	ENST00000589697	CPA5	Q8WXQ8	436 aa		13.64	□□□□□ -0.23
RAB8A-205	ENST00000589697	RABGGTA	Q92696	567 aa		13.64	□□□□□ -0.23
RAB8A-205	ENST00000589697	CYFIP2	Q96F07	1278 aa		13.64	□□□□□ -0.23
RAB8A-205	ENST00000589697	NUP85	Q9BW27	656 aa		13.64	□□□□□ -0.23
RAB8A-205	ENST00000589697	SDCBP2	Q9H190	292 aa		13.64	□□□□□ -0.23
RAB8A-205	ENST00000589697	GOLPH3	Q9H4A6	298 aa		13.64	□□□□□ -0.23
RAB8A-205	ENST00000589697	RNF14	Q9UBS8	474 aa		13.64	□□□□□ -0.23
RAB8A-205	ENST00000589697	CNOT8	Q9UFF9	292 aa	Known RBP	13.64	□□□□□ -0.23
RAB8A-205	ENST00000589697	AMFR	Q9UKV5	643 aa		13.64	□□□□□ -0.23
RAB8A-205	ENST00000589697	PACSIN2	Q9UNF0	486 aa	Predicted RBP	13.64	□□□□□ -0.23
RAB8A-205	ENST00000589697	COG5	Q9UP83	839 aa		13.64	□□□□□ -0.23
RAB8A-205	ENST00000589697	TRIM17	Q9Y577	477 aa		13.64	□□□□□ -0.23
RAB8A-205	ENST00000589697	PCNT	O95613	3336 aa		13.64	□□□□□ -0.23
RAB8A-205	ENST00000589697	CES2	O00748	559 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	CAND2	O75155	1236 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	CILP	O75339	1184 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	PAFAH1B1	P43034	410 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	DNA2	P51530	1060 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	PAK2	Q13177	524 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	LIN9	Q5TKA1	542 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	MON1B	Q7L1V2	547 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	NT5DC3	Q86UY8	548 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	CREG2	Q8IUH2	290 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	ARRDC4	Q8NCT1	418 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	ANKRD7	Q92527	254 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	C18orf25	Q96B23	403 aa	Predicted RBP	13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	ZNF560	Q96MR9	790 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	MMS19	Q96T76	1030 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	BEGAIN	Q9BUH8	593 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	CXCL16	Q9H2A7	254 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	RNF39	Q9H2S5	420 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	AVEN	Q9NQS1	362 aa	Predicted RBP	13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	TRMT13	Q9NUP7	481 aa	Known RBP	13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	FAM105A	Q9NUU6	356 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	KLK14	Q9P0G3	267 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	SMIM28	A0A1B0GU29	152 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697		A0A1W2PQ45	241 aa	Predicted RBP	13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697		A0A1W2PQY0	241 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	KBTBD13	C9JR72	458 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	CD19	P15391	556 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	ZSCAN20	P17040	1043 aa	Predicted RBP	13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	CDH8	P55286	799 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	C1QBP	Q07021	282 aa	Known RBP	13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	INCA1	Q0VD86	236 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	FBXO47	Q5MNV8	452 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	ZNF572	Q7Z3I7	529 aa	Predicted RBP	13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	PHF13	Q86YI8	300 aa	Predicted RBP	13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	GPR161	Q8N6U8	529 aa	Known RBP	13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	TMEM35B	Q8NCS4	154 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	VCPIP1	Q96JH7	1222 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	ZNF518B	Q9C0D4	1074 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	ERVK-5	Q9HDB9	667 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	ABCB6	Q9NP58	842 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	BARX2	Q9UMQ3	279 aa	Predicted RBP	13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	PCDHGC3	Q9UN70	934 aa		13.63	□□□□□ -0.23
RAB8A-205	ENST00000589697	HTT	P42858	3142 aa		13.62	□□□□□ -0.23
RAB8A-205	ENST00000589697	TRIP11	Q15643	1979 aa		13.62	□□□□□ -0.23
RAB8A-205	ENST00000589697		A0A0U1RQG5	324 aa	Predicted RBP	13.62	□□□□□ -0.23
RAB8A-205	ENST00000589697	KCNK3	O14649	394 aa		13.62	□□□□□ -0.23
RAB8A-205	ENST00000589697	CFH	P08603	1231 aa		13.62	□□□□□ -0.23
RAB8A-205	ENST00000589697	GHR	P10912	638 aa		13.62	□□□□□ -0.23
RAB8A-205	ENST00000589697	CYP3A5	P20815	502 aa		13.62	□□□□□ -0.23
RAB8A-205	ENST00000589697	PNPLA4	P41247	253 aa		13.62	□□□□□ -0.23
RAB8A-205	ENST00000589697	RAB27A	P51159	221 aa		13.62	□□□□□ -0.23
RAB8A-205	ENST00000589697	RAD23B	P54727	409 aa		13.62	□□□□□ -0.23
RAB8A-205	ENST00000589697	TRIM71	Q2Q1W2	868 aa	Known RBP	13.62	□□□□□ -0.23
RAB8A-205	ENST00000589697	CFAP221	Q4G0U5	840 aa		13.62	□□□□□ -0.23
RAB8A-205	ENST00000589697	C9orf57	Q5W0N0	161 aa		13.62	□□□□□ -0.23
RAB8A-205	ENST00000589697	USP38	Q8NB14	1042 aa		13.62	□□□□□ -0.23
RAB8A-205	ENST00000589697	TMEM176A	Q96HP8	235 aa		13.62	□□□□□ -0.23
RAB8A-205	ENST00000589697	HES6	Q96HZ4	224 aa		13.62	□□□□□ -0.23
RAB8A-205	ENST00000589697	PBK	Q96KB5	322 aa		13.62	□□□□□ -0.23
RAB8A-205	ENST00000589697	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
RAB8A-205	ENST00000589697	STARD7	Q9NQZ5	370 aa		13.62	□□□□□ -0.23
RAB8A-205	ENST00000589697	ADAM22	Q9P0K1	906 aa		13.62	□□□□□ -0.23
RAB8A-205	ENST00000589697	STXBP5L	Q9Y2K9	1186 aa		13.62	□□□□□ -0.23
RAB8A-205	ENST00000589697	PDE2A	O00408	941 aa	Predicted RBP	13.61	□□□□□ -0.23
RAB8A-205	ENST00000589697	ITGA4	P13612	1032 aa		13.61	□□□□□ -0.23
RAB8A-205	ENST00000589697	CD52	P31358	61 aa		13.61	□□□□□ -0.23
RAB8A-205	ENST00000589697	SSTR3	P32745	418 aa	Predicted RBP	13.61	□□□□□ -0.23
RAB8A-205	ENST00000589697	ITIH3	Q06033	890 aa		13.61	□□□□□ -0.23
RAB8A-205	ENST00000589697	PTPRO	Q16827	1216 aa		13.61	□□□□□ -0.23
RAB8A-205	ENST00000589697	FAM26D	Q5JW98	314 aa		13.61	□□□□□ -0.23
RAB8A-205	ENST00000589697	SLC4A11	Q8NBS3	891 aa		13.61	□□□□□ -0.23
RAB8A-205	ENST00000589697	TFAP2B	Q92481	460 aa		13.61	□□□□□ -0.23
RAB8A-205	ENST00000589697	RPS6KC1	Q96S38	1066 aa		13.61	□□□□□ -0.23
RAB8A-205	ENST00000589697	C11orf70	Q9BRQ4	267 aa		13.61	□□□□□ -0.23
RAB8A-205	ENST00000589697	SELENOO	Q9BVL4	669 aa		13.61	□□□□□ -0.23
RAB8A-205	ENST00000589697	AGO3	Q9H9G7	860 aa	Known RBP	13.61	□□□□□ -0.23
RAB8A-205	ENST00000589697	SLC38A7	Q9NVC3	462 aa		13.61	□□□□□ -0.23
RAB8A-205	ENST00000589697	HMGXB4	Q9UGU5	601 aa		13.61	□□□□□ -0.23
RAB8A-205	ENST00000589697	PADI3	Q9ULW8	664 aa		13.61	□□□□□ -0.23

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