RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 SENP8Q96LD8 212 aa12.5□□□□□ -0.41
RFX1-204ENST00000588885 PGLYRP2Q96PD5 576 aa12.5□□□□□ -0.41
RFX1-204ENST00000588885 RPP25Q9BUL9 199 aaKnown RBP12.5□□□□□ -0.41
RFX1-204ENST00000588885 TRIM9Q9C026 710 aa12.5□□□□□ -0.41
RFX1-204ENST00000588885 LRRC27Q9C0I9 530 aa12.5□□□□□ -0.41
RFX1-204ENST00000588885 TNMDQ9H2S6 317 aa12.5□□□□□ -0.41
RFX1-204ENST00000588885 ASB7Q9H672 318 aa12.5□□□□□ -0.41
RFX1-204ENST00000588885 FBXL21Q9UKT6 434 aa12.5□□□□□ -0.41
RFX1-204ENST00000588885 PIEZO1Q92508 2521 aa12.5□□□□□ -0.41
RFX1-204ENST00000588885 PIRO00625 290 aa12.49□□□□□ -0.41
RFX1-204ENST00000588885 OAZ2O95190 189 aa12.49□□□□□ -0.41
RFX1-204ENST00000588885 CFHP08603 1231 aa12.49□□□□□ -0.41
RFX1-204ENST00000588885 ATF2P15336 505 aa12.49□□□□□ -0.41
RFX1-204ENST00000588885 HOXA9P31269 272 aa12.49□□□□□ -0.41
RFX1-204ENST00000588885 SYKP43405 635 aa12.49□□□□□ -0.41
RFX1-204ENST00000588885 AARSP49588 968 aaKnown RBP eCLIP12.49□□□□□ -0.41
RFX1-204ENST00000588885 SCARA3Q6AZY7 606 aa12.49□□□□□ -0.41
RFX1-204ENST00000588885 OVOS1Q6IE37 1185 aa12.49□□□□□ -0.41
RFX1-204ENST00000588885 EFCAB13Q8IY85 973 aa12.49□□□□□ -0.41
RFX1-204ENST00000588885 TCEAL8Q8IYN2 117 aa12.49□□□□□ -0.41
RFX1-204ENST00000588885 FGF13Q92913 245 aa12.49□□□□□ -0.41
RFX1-204ENST00000588885 TSPAN18Q96SJ8 248 aa12.49□□□□□ -0.41
RFX1-204ENST00000588885 TMEM209Q96SK2 561 aa12.49□□□□□ -0.41
RFX1-204ENST00000588885 CORO1BQ9BR76 489 aa12.49□□□□□ -0.41
RFX1-204ENST00000588885 CUEDC2Q9H467 287 aa12.49□□□□□ -0.41
RFX1-204ENST00000588885 IGSF9Q9P2J2 1179 aa12.49□□□□□ -0.41
RFX1-204ENST00000588885 CDH7Q9ULB5 785 aa12.49□□□□□ -0.41
RFX1-204ENST00000588885 KCNH3Q9ULD8 1083 aa12.49□□□□□ -0.41
RFX1-204ENST00000588885 DERAQ9Y315 318 aa12.49□□□□□ -0.41
RFX1-204ENST00000588885 MRPS23Q9Y3D9 190 aaKnown RBP12.49□□□□□ -0.41
RFX1-204ENST00000588885 ANO9A1A5B4 782 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 STK25O00506 426 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 CYB561D2O14569 222 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 EXTL3O43909 919 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 IL18RAPO95256 599 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 RHOP08100 348 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 PTPN2P17706 415 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 AVPR2P30518 371 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 HOXD13P35453 343 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 TWF1Q12792 350 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 CUL4BQ13620 913 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 ALCAMQ13740 583 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 SLC5A9Q2M3M2 681 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 CCDC183Q5T5S1 534 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 TPGS2Q68CL5 300 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 LMBRD2Q68DH5 695 aaPredicted RBP12.48□□□□□ -0.41
RFX1-204ENST00000588885 ARMCX5Q6P1M9 558 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 PARM1Q6UWI2 310 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 NELFCDQ8IXH7 590 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 HS6ST3Q8IZP7 471 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 SIX5Q8N196 739 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 PRSS33Q8NF86 280 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 FLCNQ8NFG4 579 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 ATOH1Q92858 354 aaPredicted RBP12.48□□□□□ -0.41
RFX1-204ENST00000588885 MCRS1Q96EZ8 462 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 C7orf25Q9BPX7 421 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 PYM1Q9BRP8 204 aaKnown RBP12.48□□□□□ -0.41
RFX1-204ENST00000588885 IRF2BPLQ9H1B7 796 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 CLSTN2Q9H4D0 955 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 TMEM206Q9H813 350 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 PDE11AQ9HCR9 933 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 RBAKQ9NYW8 714 aaPredicted RBP12.48□□□□□ -0.41
RFX1-204ENST00000588885 AFF4Q9UHB7 1163 aaKnown RBP12.48□□□□□ -0.41
RFX1-204ENST00000588885 SERTAD1Q9UHV2 236 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 SLC27A5Q9Y2P5 690 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 C2CD2Q9Y426 696 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 INSL5Q9Y5Q6 135 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.48□□□□□ -0.41
RFX1-204ENST00000588885 NUMBLQ9Y6R0 609 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 DOCK8Q8NF50 2099 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 DOCK6Q96HP0 2047 aa12.48□□□□□ -0.41
RFX1-204ENST00000588885 VWA8A3KMH1 1905 aa12.47□□□□□ -0.41
RFX1-204ENST00000588885 ARHGEF37A1IGU5 675 aa12.47□□□□□ -0.41
RFX1-204ENST00000588885 OR6C75A6NL08 312 aa12.47□□□□□ -0.41
RFX1-204ENST00000588885 CLIC2O15247 247 aa12.47□□□□□ -0.41
RFX1-204ENST00000588885 ACTN4O43707 911 aaKnown RBP12.47□□□□□ -0.41
RFX1-204ENST00000588885 KINO60870 393 aaKnown RBP12.47□□□□□ -0.41
RFX1-204ENST00000588885 SOAT2O75908 522 aa12.47□□□□□ -0.41
RFX1-204ENST00000588885 VNN2O95498 520 aa12.47□□□□□ -0.41
RFX1-204ENST00000588885 ODC1P11926 461 aa12.47□□□□□ -0.41
RFX1-204ENST00000588885 CEBPBP17676 345 aa12.47□□□□□ -0.41
RFX1-204ENST00000588885 TYMPP19971 482 aa12.47□□□□□ -0.41
RFX1-204ENST00000588885 GARTP22102 1010 aa12.47□□□□□ -0.41
RFX1-204ENST00000588885 DUSP4Q13115 394 aa12.47□□□□□ -0.41
RFX1-204ENST00000588885 HTR4Q13639 388 aa12.47□□□□□ -0.41
RFX1-204ENST00000588885 FAM26FQ5R3K3 315 aa12.47□□□□□ -0.41
RFX1-204ENST00000588885 WSCD1Q658N2 575 aa12.47□□□□□ -0.41
RFX1-204ENST00000588885 STXBP4Q6ZWJ1 553 aa12.47□□□□□ -0.41
RFX1-204ENST00000588885 BRSK2Q8IWQ3 736 aa12.47□□□□□ -0.41
RFX1-204ENST00000588885 CEP57L1Q8IYX8 460 aa12.47□□□□□ -0.41
RFX1-204ENST00000588885 CSGALNACT2Q8N6G5 542 aa12.47□□□□□ -0.41
RFX1-204ENST00000588885 RDH13Q8NBN7 331 aa12.47□□□□□ -0.41
RFX1-204ENST00000588885 ATAD1Q8NBU5 361 aa12.47□□□□□ -0.41
RFX1-204ENST00000588885 FGF14Q92915 247 aa12.47□□□□□ -0.41
RFX1-204ENST00000588885 TCEAL4Q96EI5 215 aa12.47□□□□□ -0.41
RFX1-204ENST00000588885 KXD1Q9BQD3 176 aa12.47□□□□□ -0.41
RFX1-204ENST00000588885 GZF1Q9H116 711 aaPredicted RBP12.47□□□□□ -0.41
RFX1-204ENST00000588885 NUP62CLQ9H1M0 184 aa12.47□□□□□ -0.41
RFX1-204ENST00000588885 SLC39A2Q9NP94 309 aa12.47□□□□□ -0.41
RFX1-204ENST00000588885 CEP72Q9P209 647 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms