RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 PDE12Q6L8Q7 609 aaKnown RBP20.38■□□□□ 0.85
CLPTM1-209ENST00000588855 LUZP1Q86V48 1076 aa20.38■□□□□ 0.85
CLPTM1-209ENST00000588855 MRPL43Q8N983 215 aaKnown RBP20.38■□□□□ 0.85
CLPTM1-209ENST00000588855 PIK3R5Q8WYR1 880 aa20.38■□□□□ 0.85
CLPTM1-209ENST00000588855 VRTNQ9H8Y1 702 aa20.38■□□□□ 0.85
CLPTM1-209ENST00000588855 L1RE1Q9UN81 338 aa20.38■□□□□ 0.85
CLPTM1-209ENST00000588855 POLIQ9UNA4 740 aa20.38■□□□□ 0.85
CLPTM1-209ENST00000588855 COQ4Q9Y3A0 265 aa20.38■□□□□ 0.85
CLPTM1-209ENST00000588855 IRAK3Q9Y616 596 aa20.38■□□□□ 0.85
CLPTM1-209ENST00000588855 BECN2A8MW95 431 aa20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 LILRB3O75022 631 aa20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 CAVIN2O95810 425 aa20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 ASS1P00966 412 aaKnown RBP20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 PRKCSHP14314 528 aaPredicted RBP20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 FOSL2P15408 326 aa20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 BMS1Q14692 1282 aaKnown RBP20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 KRT31Q15323 416 aa20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 PSMD5Q16401 504 aa20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 SGSM1Q2NKQ1 1148 aa20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 WDR72Q3MJ13 1102 aa20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 MIIPQ5JXC2 388 aa20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 APPL2Q8NEU8 664 aa20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 LNX1Q8TBB1 728 aaPredicted RBP20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 FAM200AQ8TCP9 573 aa20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 RAB20Q9NX57 234 aa20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 TAB2Q9NYJ8 693 aa20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 NXF1Q9UBU9 619 aaKnown RBP20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 PMM2O15305 246 aa20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 CYP11A1P05108 521 aa20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 ATP1A3P13637 1013 aa20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 RPL17P18621 184 aaKnown RBP20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 TYMPP19971 482 aa20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 NOP14P78316 857 aaKnown RBP20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 ZNF667Q5HYK9 610 aa20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 WSCD1Q658N2 575 aa20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 MICALL1Q8N3F8 863 aa20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 NSUN3Q9H649 340 aaKnown RBP20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 APOBEC3GQ9HC16 384 aaKnown RBP20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 SSX2IPQ9Y2D8 614 aa20.37■□□□□ 0.85
CLPTM1-209ENST00000588855 PLXNA3P51805 1871 aa20.36■□□□□ 0.85
CLPTM1-209ENST00000588855 ARHGEF37A1IGU5 675 aa20.36■□□□□ 0.85
CLPTM1-209ENST00000588855 P4HA2O15460 535 aa20.36■□□□□ 0.85
CLPTM1-209ENST00000588855 HUS1O60921 280 aa20.36■□□□□ 0.85
CLPTM1-209ENST00000588855 TNNC1P63316 161 aa20.36■□□□□ 0.85
CLPTM1-209ENST00000588855 YWHAHQ04917 246 aaPredicted RBP20.36■□□□□ 0.85
CLPTM1-209ENST00000588855 MRPL58Q14197 206 aaKnown RBP20.36■□□□□ 0.85
CLPTM1-209ENST00000588855 SOWAHAQ2M3V2 549 aa20.36■□□□□ 0.85
CLPTM1-209ENST00000588855 VWA3BQ502W6 1294 aa20.36■□□□□ 0.85
CLPTM1-209ENST00000588855 TCEAL5Q5H9L2 206 aa20.36■□□□□ 0.85
CLPTM1-209ENST00000588855 SCARA5Q6ZMJ2 495 aa20.36■□□□□ 0.85
CLPTM1-209ENST00000588855 ANKS3Q6ZW76 656 aa20.36■□□□□ 0.85
CLPTM1-209ENST00000588855 GPR65Q8IYL9 337 aa20.36■□□□□ 0.85
CLPTM1-209ENST00000588855 PDCL2Q8N4E4 241 aa20.36■□□□□ 0.85
CLPTM1-209ENST00000588855 TOP6BLQ8N6T0 577 aa20.36■□□□□ 0.85
CLPTM1-209ENST00000588855 TAF4BQ92750 862 aa20.36■□□□□ 0.85
CLPTM1-209ENST00000588855 MMS19Q96T76 1030 aa20.36■□□□□ 0.85
CLPTM1-209ENST00000588855 IMPG2Q9BZV3 1241 aa20.36■□□□□ 0.85
CLPTM1-209ENST00000588855 RXFP1Q9HBX9 757 aa20.36■□□□□ 0.85
CLPTM1-209ENST00000588855 TEX28O15482 410 aa20.35■□□□□ 0.85
CLPTM1-209ENST00000588855 CNPP09543 421 aaKnown RBP20.35■□□□□ 0.85
CLPTM1-209ENST00000588855 OVOS1Q6IE37 1185 aa20.35■□□□□ 0.85
CLPTM1-209ENST00000588855 PDXDC1Q6P996 788 aa20.35■□□□□ 0.85
CLPTM1-209ENST00000588855 RSPO2Q6UXX9 243 aaPredicted RBP20.35■□□□□ 0.85
CLPTM1-209ENST00000588855 LIMS2Q7Z4I7 341 aa20.35■□□□□ 0.85
CLPTM1-209ENST00000588855 RBM23Q86U06 439 aaKnown RBP20.35■□□□□ 0.85
CLPTM1-209ENST00000588855 GLYCTKQ8IVS8 523 aa20.35■□□□□ 0.85
CLPTM1-209ENST00000588855 NDST4Q9H3R1 872 aa20.35■□□□□ 0.85
CLPTM1-209ENST00000588855 SMYD3Q9H7B4 428 aa20.35■□□□□ 0.85
CLPTM1-209ENST00000588855 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.35■□□□□ 0.85
CLPTM1-209ENST00000588855 MTRRQ9UBK8 725 aa20.35■□□□□ 0.85
CLPTM1-209ENST00000588855 LIMA1Q9UHB6 759 aaKnown RBP20.35■□□□□ 0.85
CLPTM1-209ENST00000588855 DSEQ9UL01 958 aa20.35■□□□□ 0.85
CLPTM1-209ENST00000588855 PRUNE2Q8WUY3 3088 aa20.34■□□□□ 0.85
CLPTM1-209ENST00000588855 PER2O15055 1255 aa20.34■□□□□ 0.85
CLPTM1-209ENST00000588855 OAZ2O95190 189 aa20.34■□□□□ 0.85
CLPTM1-209ENST00000588855 CDK11BP21127 795 aaKnown RBP20.34■□□□□ 0.85
CLPTM1-209ENST00000588855 NRIP1P48552 1158 aa20.34■□□□□ 0.85
CLPTM1-209ENST00000588855 ZNF280DQ6N043 979 aa20.34■□□□□ 0.85
CLPTM1-209ENST00000588855 METTL23Q86XA0 190 aa20.34■□□□□ 0.85
CLPTM1-209ENST00000588855 ADGRF2Q8IZF7 708 aa20.34■□□□□ 0.85
CLPTM1-209ENST00000588855 CCDC150Q8NCX0 1101 aa20.34■□□□□ 0.85
CLPTM1-209ENST00000588855 LMO3Q8TAP4 145 aa20.34■□□□□ 0.85
CLPTM1-209ENST00000588855 KBTBD7Q8WVZ9 684 aa20.34■□□□□ 0.85
CLPTM1-209ENST00000588855 KLHL5Q96PQ7 755 aa20.34■□□□□ 0.85
CLPTM1-209ENST00000588855 CLSTN3Q9BQT9 956 aa20.34■□□□□ 0.85
CLPTM1-209ENST00000588855 VPS16Q9H269 839 aa20.34■□□□□ 0.85
CLPTM1-209ENST00000588855 TLE6Q9H808 572 aa20.34■□□□□ 0.85
CLPTM1-209ENST00000588855 PES1O00541 588 aaKnown RBP20.33■□□□□ 0.85
CLPTM1-209ENST00000588855 ADAM12O43184 909 aa20.33■□□□□ 0.85
CLPTM1-209ENST00000588855 TBC1D4O60343 1298 aa20.33■□□□□ 0.85
CLPTM1-209ENST00000588855 GTF2F1P35269 517 aaKnown RBP eCLIP20.33■□□□□ 0.85
CLPTM1-209ENST00000588855 ASPAP45381 313 aa20.33■□□□□ 0.85
CLPTM1-209ENST00000588855 RAP1GAPP47736 663 aa20.33■□□□□ 0.85
CLPTM1-209ENST00000588855 CREMQ03060 361 aa20.33■□□□□ 0.85
CLPTM1-209ENST00000588855 CETN1Q12798 172 aa20.33■□□□□ 0.85
CLPTM1-209ENST00000588855 CTXN3Q4LDR2 81 aa20.33■□□□□ 0.85
CLPTM1-209ENST00000588855 APTXQ7Z2E3 356 aaKnown RBP20.33■□□□□ 0.85
CLPTM1-209ENST00000588855 OSTM1Q86WC4 334 aa20.33■□□□□ 0.85
CLPTM1-209ENST00000588855 TMEM86AQ8N2M4 240 aa20.33■□□□□ 0.85
CLPTM1-209ENST00000588855 ANKRD20A12PQ8NF67 263 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms