RNA–Protein interactions for RNA: ENST00000588831.5

LRFN3-204, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRFN3, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-204ENST00000588831 TMEM253P0C7T8 217 aa12.86□□□□□ -0.35
LRFN3-204ENST00000588831 ALAS1P13196 640 aa12.86□□□□□ -0.35
LRFN3-204ENST00000588831 VAMP7P51809 220 aa12.86□□□□□ -0.35
LRFN3-204ENST00000588831 EPHB1P54762 984 aa12.86□□□□□ -0.35
LRFN3-204ENST00000588831 MED21Q13503 144 aa12.86□□□□□ -0.35
LRFN3-204ENST00000588831 LACTB2Q53H82 288 aaPredicted RBP12.86□□□□□ -0.35
LRFN3-204ENST00000588831 TMEM53Q6P2H8 277 aa12.86□□□□□ -0.35
LRFN3-204ENST00000588831 CDAN1Q8IWY9 1227 aa12.86□□□□□ -0.35
LRFN3-204ENST00000588831 ETNPPLQ8TBG4 499 aa12.86□□□□□ -0.35
LRFN3-204ENST00000588831 TESPA1A2RU30 521 aaPredicted RBP12.86□□□□□ -0.35
LRFN3-204ENST00000588831 WDR46O15213 610 aaKnown RBP12.86□□□□□ -0.35
LRFN3-204ENST00000588831 PHBP35232 272 aa12.86□□□□□ -0.35
LRFN3-204ENST00000588831 COILP38432 576 aaPredicted RBP12.86□□□□□ -0.35
LRFN3-204ENST00000588831 RIPK1Q13546 671 aa12.86□□□□□ -0.35
LRFN3-204ENST00000588831 MPP2Q14168 576 aa12.86□□□□□ -0.35
LRFN3-204ENST00000588831 XKR9Q5GH70 373 aa12.86□□□□□ -0.35
LRFN3-204ENST00000588831 C6orf118Q5T5N4 469 aa12.86□□□□□ -0.35
LRFN3-204ENST00000588831 IYDQ6PHW0 289 aa12.86□□□□□ -0.35
LRFN3-204ENST00000588831 PPP4R3CPQ6ZMV5 832 aa12.86□□□□□ -0.35
LRFN3-204ENST00000588831 LARGE2Q8N3Y3 721 aa12.86□□□□□ -0.35
LRFN3-204ENST00000588831 CEP295NLQ96MC4 621 aa12.86□□□□□ -0.35
LRFN3-204ENST00000588831 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.86□□□□□ -0.35
LRFN3-204ENST00000588831 NDE1Q9NXR1 346 aa12.86□□□□□ -0.35
LRFN3-204ENST00000588831 CYP39A1Q9NYL5 469 aa12.86□□□□□ -0.35
LRFN3-204ENST00000588831 SAE1Q9UBE0 346 aaPredicted RBP12.86□□□□□ -0.35
LRFN3-204ENST00000588831 PRR12Q9ULL5 1215 aa12.86□□□□□ -0.35
LRFN3-204ENST00000588831 SPDYE16A6NNV3 312 aaPredicted RBP12.85□□□□□ -0.35
LRFN3-204ENST00000588831 NOL3O60936 208 aaKnown RBP12.85□□□□□ -0.35
LRFN3-204ENST00000588831 EYA4O95677 639 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 VAV1P15498 845 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 THOC7Q6I9Y2 204 aaKnown RBP12.85□□□□□ -0.35
LRFN3-204ENST00000588831 CYFIP1Q7L576 1253 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 TRIML2Q8N7C3 387 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 LRRN4Q8WUT4 740 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 ZSWIM1Q9BR11 485 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 EPB41L4BQ9H329 900 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 EURLQ9NYK6 297 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 GRHL1Q9NZI5 618 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 SELENONQ9NZV5 590 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 FAM163BP0C2L3 166 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 ATF2P15336 505 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 MARK3P27448 753 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 NAA20P61599 178 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 NOP14P78316 857 aaKnown RBP12.85□□□□□ -0.35
LRFN3-204ENST00000588831 PHEXP78562 749 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 ITIH4Q14624 930 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 MMEL1Q495T6 779 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 KIAA2013Q8IYS2 634 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 TRAPPC9Q96Q05 1148 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 SAYSD1Q9NPB0 183 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 ZDHHC18Q9NUE0 388 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 PI4KBQ9UBF8 816 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 EFR3BQ9Y2G0 817 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 TRIM64CA6NLI5 447 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 TJP3O95049 919 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 MAP3K6O95382 1288 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 ITGA2BP08514 1039 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 TNNI1P19237 187 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 PPIDQ08752 370 aaKnown RBP12.85□□□□□ -0.35
LRFN3-204ENST00000588831 C1orf146Q5VVC0 180 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 TMEM214Q6NUQ4 689 aaKnown RBP12.85□□□□□ -0.35
LRFN3-204ENST00000588831 ZNF720Q7Z2F6 126 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 SLC13A5Q86YT5 568 aaPredicted RBP12.85□□□□□ -0.35
LRFN3-204ENST00000588831 POMGNT1Q8WZA1 660 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 FNBP1Q96RU3 617 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 GLIS2Q9BZE0 524 aaPredicted RBP12.85□□□□□ -0.35
LRFN3-204ENST00000588831 WDR11Q9BZH6 1224 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 DCLRE1BQ9H816 532 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 GGA2Q9UJY4 613 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 STXBP5LQ9Y2K9 1186 aa12.85□□□□□ -0.35
LRFN3-204ENST00000588831 F5H423 210 aaPredicted RBP12.84□□□□□ -0.35
LRFN3-204ENST00000588831 XPO1O14980 1071 aaKnown RBP12.84□□□□□ -0.35
LRFN3-204ENST00000588831 SNX3O60493 162 aa12.84□□□□□ -0.35
LRFN3-204ENST00000588831 ACADSP16219 412 aa12.84□□□□□ -0.35
LRFN3-204ENST00000588831 SPIRE1Q08AE8 756 aa12.84□□□□□ -0.35
LRFN3-204ENST00000588831 CNGA2Q16280 664 aa12.84□□□□□ -0.35
LRFN3-204ENST00000588831 TSHZ1Q6ZSZ6 1077 aa12.84□□□□□ -0.35
LRFN3-204ENST00000588831 FITM2Q8N6M3 262 aa12.84□□□□□ -0.35
LRFN3-204ENST00000588831 TAS1R2Q8TE23 839 aa12.84□□□□□ -0.35
LRFN3-204ENST00000588831 ZFAND2BQ8WV99 257 aa12.84□□□□□ -0.35
LRFN3-204ENST00000588831 RILPQ96NA2 401 aa12.84□□□□□ -0.35
LRFN3-204ENST00000588831 CCDC77Q9BR77 488 aa12.84□□□□□ -0.35
LRFN3-204ENST00000588831 HERPUD2Q9BSE4 406 aa12.84□□□□□ -0.35
LRFN3-204ENST00000588831 DCUN1D5Q9BTE7 237 aa12.84□□□□□ -0.35
LRFN3-204ENST00000588831 ADAM7Q9H2U9 754 aa12.84□□□□□ -0.35
LRFN3-204ENST00000588831 UBN1Q9NPG3 1134 aa12.84□□□□□ -0.35
LRFN3-204ENST00000588831 DSEQ9UL01 958 aa12.84□□□□□ -0.35
LRFN3-204ENST00000588831 SCINQ9Y6U3 715 aa12.84□□□□□ -0.35
LRFN3-204ENST00000588831 CCDC88AQ3V6T2 1871 aa12.84□□□□□ -0.35
LRFN3-204ENST00000588831 DOCK2Q92608 1830 aa12.84□□□□□ -0.35
LRFN3-204ENST00000588831 PCP4L1A6NKN8 68 aa12.84□□□□□ -0.35
LRFN3-204ENST00000588831 IPO5O00410 1097 aaKnown RBP12.84□□□□□ -0.35
LRFN3-204ENST00000588831 RALAP11233 206 aa12.84□□□□□ -0.35
LRFN3-204ENST00000588831 CTNNA2P26232 953 aa12.84□□□□□ -0.35
LRFN3-204ENST00000588831 CLK2P49760 499 aaKnown RBP12.84□□□□□ -0.35
LRFN3-204ENST00000588831 RTP1P59025 263 aa12.84□□□□□ -0.35
LRFN3-204ENST00000588831 KPNB1Q14974 876 aaKnown RBP12.84□□□□□ -0.35
LRFN3-204ENST00000588831 LRRC74BQ6ZQY2 392 aa12.84□□□□□ -0.35
LRFN3-204ENST00000588831 ATXN2LQ8WWM7 1075 aaKnown RBP12.84□□□□□ -0.35
LRFN3-204ENST00000588831 ANGPTL2Q9UKU9 493 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms