RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 ACTN3Q08043 901 aaPredicted RBP7.59□□□□□ -1.19
SPIDR-228ENST00000588781 MAMLD1Q13495 774 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 ACAP1Q15027 740 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 TARBP2Q15633 366 aaKnown RBP7.59□□□□□ -1.19
SPIDR-228ENST00000588781 TMEM132AQ24JP5 1023 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 EAPPQ56P03 285 aaPredicted RBP7.59□□□□□ -1.19
SPIDR-228ENST00000588781 TNFAIP8L3Q5GJ75 292 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 ANGEL2Q5VTE6 544 aaKnown RBP7.59□□□□□ -1.19
SPIDR-228ENST00000588781 CDCA2Q69YH5 1023 aaPredicted RBP7.59□□□□□ -1.19
SPIDR-228ENST00000588781 RHBDF2Q6PJF5 856 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 C6orf89Q6UWU4 347 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 LBX2Q6XYB7 198 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.59□□□□□ -1.19
SPIDR-228ENST00000588781 SEPT14Q6ZU15 432 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 PLPPR4Q7Z2D5 763 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 SAMD7Q7Z3H4 446 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 POLNQ7Z5Q5 900 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 NIPA2Q8N8Q9 360 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 PROCA1Q8NCQ7 364 aaPredicted RBP7.59□□□□□ -1.19
SPIDR-228ENST00000588781 ZSWIM2Q8NEG5 633 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 ASAP3Q8TDY4 903 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 GTF3C2Q8WUA4 911 aaPredicted RBP7.59□□□□□ -1.19
SPIDR-228ENST00000588781 C1orf54Q8WWF1 131 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 CPA5Q8WXQ8 436 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 ZKSCAN4Q969J2 545 aaPredicted RBP7.59□□□□□ -1.19
SPIDR-228ENST00000588781 TMEM143Q96AN5 459 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 BTBD6Q96KE9 485 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 C11orf70Q9BRQ4 267 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 PI4K2AQ9BTU6 479 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 TARS2Q9BW92 718 aaKnown RBP7.59□□□□□ -1.19
SPIDR-228ENST00000588781 CCDC113Q9H0I3 377 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 CDC42EP4Q9H3Q1 356 aaKnown RBP7.59□□□□□ -1.19
SPIDR-228ENST00000588781 SEMA4AQ9H3S1 761 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 ANKFY1Q9P2R3 1169 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 DDX20Q9UHI6 824 aaKnown RBP7.59□□□□□ -1.19
SPIDR-228ENST00000588781 LGALS13Q9UHV8 139 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 PCDHGC3Q9UN70 934 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 SIP14410 1827 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 LOC285556D6RIA3 1793 aa7.59□□□□□ -1.2
SPIDR-228ENST00000588781 ADGRA2Q96PE1 1338 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 CNTNAP2Q9UHC6 1331 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 A0A1B0GUA9 196 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 CFAP73A6NFT4 308 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 TMEM191CA6NGB0 347 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 CCT8L1PA6NM43 557 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 HBP1O60381 514 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 LGR5O75473 907 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 FARP2O94887 1054 aaPredicted RBP7.58□□□□□ -1.2
SPIDR-228ENST00000588781 SUN1O94901 812 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 VNN1O95497 513 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 KRT1P04264 644 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 SHBGP04278 402 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 VIMP08670 466 aaKnown RBP7.58□□□□□ -1.2
SPIDR-228ENST00000588781 WEE2P0C1S8 567 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 RALAP11233 206 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 ATP2A2P16615 1042 aaKnown RBP7.58□□□□□ -1.2
SPIDR-228ENST00000588781 OSBPP22059 807 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 UBA1P22314 1058 aaKnown RBP7.58□□□□□ -1.2
SPIDR-228ENST00000588781 FGFR4P22455 802 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 TMOD1P28289 359 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 ATICP31939 592 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 GBP2P32456 591 aaPredicted RBP7.58□□□□□ -1.2
SPIDR-228ENST00000588781 CDH5P33151 784 aaPredicted RBP7.58□□□□□ -1.2
SPIDR-228ENST00000588781 NF2P35240 595 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 KCNJ1P48048 391 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 ITGA8P53708 1063 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 GSCP56915 257 aaPredicted RBP7.58□□□□□ -1.2
SPIDR-228ENST00000588781 POU5F1BQ06416 359 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 NFX1Q12986 1120 aaKnown RBP7.58□□□□□ -1.2
SPIDR-228ENST00000588781 KLF1Q13351 362 aaPredicted RBP7.58□□□□□ -1.2
SPIDR-228ENST00000588781 SNX1Q13596 522 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 AUHQ13825 339 aaKnown RBP7.58□□□□□ -1.2
SPIDR-228ENST00000588781 CAPSQ13938 189 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 MORF4L2Q15014 288 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 ZNF699Q32M78 642 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 IZUMO3Q5VZ72 239 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 AADACL2Q6P093 401 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 MPZL3Q6UWV2 235 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 CRELD2Q6UXH1 353 aaPredicted RBP7.58□□□□□ -1.2
SPIDR-228ENST00000588781 CENPUQ71F23 418 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 ERICH1Q86X53 443 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 TDRPQ86YL5 185 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 THNSL1Q8IYQ7 743 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 ZCCHC9Q8N567 271 aaKnown RBP7.58□□□□□ -1.2
SPIDR-228ENST00000588781 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.58□□□□□ -1.2
SPIDR-228ENST00000588781 FNIP1Q8TF40 1166 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 ZNF606Q8WXB4 792 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 ARHGEF2Q92974 986 aaKnown RBP7.58□□□□□ -1.2
SPIDR-228ENST00000588781 SGSM3Q96HU1 749 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 ACO2Q99798 780 aaKnown RBP7.58□□□□□ -1.2
SPIDR-228ENST00000588781 LHX5Q9H2C1 402 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 EPB41L4BQ9H329 900 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 SMARCAD1Q9H4L7 1026 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 RABEP2Q9H5N1 569 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 CYP3A43Q9HB55 503 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.58□□□□□ -1.2
SPIDR-228ENST00000588781 PRMT7Q9NVM4 692 aaPredicted RBP7.58□□□□□ -1.2
SPIDR-228ENST00000588781 SHOC2Q9UQ13 582 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 USTQ9Y2C2 406 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 MYH9P35579 1960 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms