RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 DZANK1Q9NVP4 752 aa21.76■■□□□ 1.07
DDX39A-207ENST00000588542 GDAP2Q9NXN4 497 aa21.76■■□□□ 1.07
DDX39A-207ENST00000588542 FBXL5Q9UKA1 691 aa21.76■■□□□ 1.07
DDX39A-207ENST00000588542 GRXCR2A6NFK2 248 aa21.75■■□□□ 1.07
DDX39A-207ENST00000588542 MBD3O95983 291 aa21.75■■□□□ 1.07
DDX39A-207ENST00000588542 BMP1P13497 986 aa21.75■■□□□ 1.07
DDX39A-207ENST00000588542 HOXB8P17481 243 aaPredicted RBP21.75■■□□□ 1.07
DDX39A-207ENST00000588542 AP3M2P53677 418 aa21.75■■□□□ 1.07
DDX39A-207ENST00000588542 CTXN3Q4LDR2 81 aa21.75■■□□□ 1.07
DDX39A-207ENST00000588542 ZNF280DQ6N043 979 aa21.75■■□□□ 1.07
DDX39A-207ENST00000588542 RBM43Q6ZSC3 357 aaKnown RBP21.75■■□□□ 1.07
DDX39A-207ENST00000588542 C12orf76Q8N812 135 aaPredicted RBP21.75■■□□□ 1.07
DDX39A-207ENST00000588542 FEZF2Q8TBJ5 459 aa21.75■■□□□ 1.07
DDX39A-207ENST00000588542 HPDLQ96IR7 371 aa21.75■■□□□ 1.07
DDX39A-207ENST00000588542 IKBKBO14920 756 aa21.74■■□□□ 1.07
DDX39A-207ENST00000588542 SLC16A3O15427 465 aaKnown RBP21.74■■□□□ 1.07
DDX39A-207ENST00000588542 MBTPS2O43462 519 aa21.74■■□□□ 1.07
DDX39A-207ENST00000588542 VNN1O95497 513 aa21.74■■□□□ 1.07
DDX39A-207ENST00000588542 TRIM49P0CI25 452 aa21.74■■□□□ 1.07
DDX39A-207ENST00000588542 TRIM49CP0CI26 452 aa21.74■■□□□ 1.07
DDX39A-207ENST00000588542 STX17P56962 302 aa21.74■■□□□ 1.07
DDX39A-207ENST00000588542 ROR1Q01973 937 aa21.74■■□□□ 1.07
DDX39A-207ENST00000588542 PAK1Q13153 545 aa21.74■■□□□ 1.07
DDX39A-207ENST00000588542 WSCD1Q658N2 575 aa21.74■■□□□ 1.07
DDX39A-207ENST00000588542 OVOS1Q6IE37 1185 aa21.74■■□□□ 1.07
DDX39A-207ENST00000588542 PTCRAQ6ISU1 281 aaPredicted RBP21.74■■□□□ 1.07
DDX39A-207ENST00000588542 C15orf39Q6ZRI6 1047 aa21.74■■□□□ 1.07
DDX39A-207ENST00000588542 USP37Q86T82 979 aa21.74■■□□□ 1.07
DDX39A-207ENST00000588542 HDAC7Q8WUI4 952 aa21.74■■□□□ 1.07
DDX39A-207ENST00000588542 MED15Q96RN5 788 aa21.74■■□□□ 1.07
DDX39A-207ENST00000588542 FBXW11Q9UKB1 542 aa21.74■■□□□ 1.07
DDX39A-207ENST00000588542 L1RE1Q9UN81 338 aa21.74■■□□□ 1.07
DDX39A-207ENST00000588542 DENND4AQ7Z401 1863 aa21.73■■□□□ 1.07
DDX39A-207ENST00000588542 BICDL2A1A5D9 508 aa21.73■■□□□ 1.07
DDX39A-207ENST00000588542 ARHGEF37A1IGU5 675 aa21.73■■□□□ 1.07
DDX39A-207ENST00000588542 WDR27A2RRH5 827 aa21.73■■□□□ 1.07
DDX39A-207ENST00000588542 EPB41P11171 864 aaKnown RBP21.73■■□□□ 1.07
DDX39A-207ENST00000588542 KRT13P13646 458 aa21.73■■□□□ 1.07
DDX39A-207ENST00000588542 MYL6P60660 151 aa21.73■■□□□ 1.07
DDX39A-207ENST00000588542 PPP3CAQ08209 521 aa21.73■■□□□ 1.07
DDX39A-207ENST00000588542 MYO1EQ12965 1108 aa21.73■■□□□ 1.07
DDX39A-207ENST00000588542 SMAD4Q13485 552 aaKnown RBP21.73■■□□□ 1.07
DDX39A-207ENST00000588542 ZACNQ401N2 412 aa21.73■■□□□ 1.07
DDX39A-207ENST00000588542 SV2AQ7L0J3 742 aa21.73■■□□□ 1.07
DDX39A-207ENST00000588542 LIMS2Q7Z4I7 341 aa21.73■■□□□ 1.07
DDX39A-207ENST00000588542 KREMEN2Q8NCW0 462 aa21.73■■□□□ 1.07
DDX39A-207ENST00000588542 RTP3Q9BQQ7 232 aa21.73■■□□□ 1.07
DDX39A-207ENST00000588542 APOL5Q9BWW9 433 aa21.73■■□□□ 1.07
DDX39A-207ENST00000588542 XYLT2Q9H1B5 865 aa21.73■■□□□ 1.07
DDX39A-207ENST00000588542 PLEKHA4Q9H4M7 779 aa21.73■■□□□ 1.07
DDX39A-207ENST00000588542 DSEQ9UL01 958 aa21.73■■□□□ 1.07
DDX39A-207ENST00000588542 SNX9Q9Y5X1 595 aa21.73■■□□□ 1.07
DDX39A-207ENST00000588542 DOCK6Q96HP0 2047 aa21.73■■□□□ 1.07
DDX39A-207ENST00000588542 ABLIM3O94929 683 aa21.72■■□□□ 1.07
DDX39A-207ENST00000588542 STAU1O95793 577 aaKnown RBP21.72■■□□□ 1.07
DDX39A-207ENST00000588542 NLRP12P59046 1061 aa21.72■■□□□ 1.07
DDX39A-207ENST00000588542 BIRC3Q13489 604 aa21.72■■□□□ 1.07
DDX39A-207ENST00000588542 PUS10Q3MIT2 529 aaKnown RBP21.72■■□□□ 1.07
DDX39A-207ENST00000588542 TJAP1Q5JTD0 557 aa21.72■■□□□ 1.07
DDX39A-207ENST00000588542 RARS2Q5T160 578 aaKnown RBP21.72■■□□□ 1.07
DDX39A-207ENST00000588542 FILIP1Q7Z7B0 1213 aa21.72■■□□□ 1.07
DDX39A-207ENST00000588542 PDCL2Q8N4E4 241 aa21.72■■□□□ 1.07
DDX39A-207ENST00000588542 MLKLQ8NB16 471 aa21.72■■□□□ 1.07
DDX39A-207ENST00000588542 CEP63Q96MT8 703 aa21.72■■□□□ 1.07
DDX39A-207ENST00000588542 CDH22Q9UJ99 828 aa21.72■■□□□ 1.07
DDX39A-207ENST00000588542 R3HCC1Q9Y3T6 440 aaKnown RBP21.72■■□□□ 1.07
DDX39A-207ENST00000588542 OR6C75A6NL08 312 aa21.71■■□□□ 1.07
DDX39A-207ENST00000588542 HUS1O60921 280 aa21.71■■□□□ 1.07
DDX39A-207ENST00000588542 PHACTR2O75167 634 aa21.71■■□□□ 1.07
DDX39A-207ENST00000588542 PAPLNO95428 1278 aa21.71■■□□□ 1.07
DDX39A-207ENST00000588542 IL9P15248 144 aa21.71■■□□□ 1.07
DDX39A-207ENST00000588542 GCLMP48507 274 aa21.71■■□□□ 1.07
DDX39A-207ENST00000588542 ARPP19P56211 112 aa21.71■■□□□ 1.07
DDX39A-207ENST00000588542 TRPC3Q13507 836 aa21.71■■□□□ 1.07
DDX39A-207ENST00000588542 NCOA4Q13772 614 aa21.71■■□□□ 1.07
DDX39A-207ENST00000588542 SOWAHAQ2M3V2 549 aa21.71■■□□□ 1.07
DDX39A-207ENST00000588542 DPCR1Q3MIW9 517 aa21.71■■□□□ 1.07
DDX39A-207ENST00000588542 METTL23Q86XA0 190 aa21.71■■□□□ 1.07
DDX39A-207ENST00000588542 OR10T2Q8NGX3 314 aa21.71■■□□□ 1.07
DDX39A-207ENST00000588542 ZNF461Q8TAF7 563 aa21.71■■□□□ 1.07
DDX39A-207ENST00000588542 SUSD6Q92537 303 aa21.71■■□□□ 1.07
DDX39A-207ENST00000588542 TMEM209Q96SK2 561 aa21.71■■□□□ 1.07
DDX39A-207ENST00000588542 OXCT2Q9BYC2 517 aaPredicted RBP21.71■■□□□ 1.07
DDX39A-207ENST00000588542 ADAM7Q9H2U9 754 aa21.71■■□□□ 1.07
DDX39A-207ENST00000588542 SFXN1Q9H9B4 322 aa21.71■■□□□ 1.07
DDX39A-207ENST00000588542 DPP7Q9UHL4 492 aa21.71■■□□□ 1.07
DDX39A-207ENST00000588542 RWDD2AQ9UIY3 292 aa21.71■■□□□ 1.07
DDX39A-207ENST00000588542 USP15Q9Y4E8 981 aaPredicted RBP21.71■■□□□ 1.07
DDX39A-207ENST00000588542 RFPL2O75678 378 aa21.7■■□□□ 1.06
DDX39A-207ENST00000588542 OR4Q2P0C623 313 aa21.7■■□□□ 1.06
DDX39A-207ENST00000588542 ATICP31939 592 aa21.7■■□□□ 1.06
DDX39A-207ENST00000588542 SMAD2Q15796 467 aaKnown RBP21.7■■□□□ 1.06
DDX39A-207ENST00000588542 TMC5Q6UXY8 1006 aa21.7■■□□□ 1.06
DDX39A-207ENST00000588542 TOP6BLQ8N6T0 577 aa21.7■■□□□ 1.06
DDX39A-207ENST00000588542 CMASQ8NFW8 434 aaPredicted RBP21.7■■□□□ 1.06
DDX39A-207ENST00000588542 VRTNQ9H8Y1 702 aa21.7■■□□□ 1.06
DDX39A-207ENST00000588542 ZMYND10O75800 440 aa21.69■■□□□ 1.06
DDX39A-207ENST00000588542 VNN2O95498 520 aa21.69■■□□□ 1.06
DDX39A-207ENST00000588542 GTF2H1P32780 548 aa21.69■■□□□ 1.06
DDX39A-207ENST00000588542 ITIH3Q06033 890 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms