RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 SSTR3P32745 418 aaPredicted RBP21.16■□□□□ 0.98
TRIM47-204ENST00000587339 TUBB4BP68371 445 aa21.16■□□□□ 0.98
TRIM47-204ENST00000587339 NOMO3P69849 1222 aa21.16■□□□□ 0.98
TRIM47-204ENST00000587339 C18orf25Q96B23 403 aaPredicted RBP21.16■□□□□ 0.98
TRIM47-204ENST00000587339 TRIM11Q96F44 468 aa21.16■□□□□ 0.98
TRIM47-204ENST00000587339 RNF19AQ9NV58 838 aa21.16■□□□□ 0.98
TRIM47-204ENST00000587339 TLR3O15455 904 aaKnown RBP21.16■□□□□ 0.98
TRIM47-204ENST00000587339 XPOTO43592 962 aaKnown RBP21.16■□□□□ 0.98
TRIM47-204ENST00000587339 KCNE1P15382 129 aa21.16■□□□□ 0.98
TRIM47-204ENST00000587339 BRD2P25440 801 aaKnown RBP21.16■□□□□ 0.98
TRIM47-204ENST00000587339 PTPROQ16827 1216 aa21.16■□□□□ 0.98
TRIM47-204ENST00000587339 XKR4Q5GH76 650 aa21.16■□□□□ 0.98
TRIM47-204ENST00000587339 PPP1R2P3Q6NXS1 205 aa21.16■□□□□ 0.98
TRIM47-204ENST00000587339 NT5DC3Q86UY8 548 aa21.16■□□□□ 0.98
TRIM47-204ENST00000587339 MCOLN2Q8IZK6 566 aa21.16■□□□□ 0.98
TRIM47-204ENST00000587339 RPGRIP1Q96KN7 1286 aa21.16■□□□□ 0.98
TRIM47-204ENST00000587339 CNOT8Q9UFF9 292 aaKnown RBP21.16■□□□□ 0.98
TRIM47-204ENST00000587339 MTA2O94776 668 aa21.15■□□□□ 0.98
TRIM47-204ENST00000587339 KIF4AO95239 1232 aa21.15■□□□□ 0.98
TRIM47-204ENST00000587339 MYBL1P10243 752 aa21.15■□□□□ 0.98
TRIM47-204ENST00000587339 CCDC181Q5TID7 509 aa21.15■□□□□ 0.98
TRIM47-204ENST00000587339 LRRC52Q8N7C0 313 aa21.15■□□□□ 0.98
TRIM47-204ENST00000587339 ANKRD7Q92527 254 aa21.15■□□□□ 0.98
TRIM47-204ENST00000587339 NUP85Q9BW27 656 aa21.15■□□□□ 0.98
TRIM47-204ENST00000587339 FAM124BQ9H5Z6 455 aaPredicted RBP21.15■□□□□ 0.98
TRIM47-204ENST00000587339 FAM105AQ9NUU6 356 aa21.15■□□□□ 0.98
TRIM47-204ENST00000587339 UVRAGQ9P2Y5 699 aa21.15■□□□□ 0.98
TRIM47-204ENST00000587339 AMFRQ9UKV5 643 aa21.15■□□□□ 0.98
TRIM47-204ENST00000587339 CILPO75339 1184 aa21.14■□□□□ 0.98
TRIM47-204ENST00000587339 CD4P01730 458 aa21.14■□□□□ 0.98
TRIM47-204ENST00000587339 PAEPP09466 180 aa21.14■□□□□ 0.98
TRIM47-204ENST00000587339 ZSCAN20P17040 1043 aaPredicted RBP21.14■□□□□ 0.98
TRIM47-204ENST00000587339 ARRDC4Q8NCT1 418 aa21.14■□□□□ 0.98
TRIM47-204ENST00000587339 ZNF564Q8TBZ8 553 aaPredicted RBP21.14■□□□□ 0.98
TRIM47-204ENST00000587339 RABGGTAQ92696 567 aa21.14■□□□□ 0.98
TRIM47-204ENST00000587339 AGO3Q9H9G7 860 aaKnown RBP21.14■□□□□ 0.98
TRIM47-204ENST00000587339 ABCB6Q9NP58 842 aa21.14■□□□□ 0.98
TRIM47-204ENST00000587339 A0A1W2PQ45 241 aaPredicted RBP21.14■□□□□ 0.97
TRIM47-204ENST00000587339 A0A1W2PQY0 241 aa21.14■□□□□ 0.97
TRIM47-204ENST00000587339 PDE2AO00408 941 aaPredicted RBP21.14■□□□□ 0.97
TRIM47-204ENST00000587339 CD19P15391 556 aa21.14■□□□□ 0.97
TRIM47-204ENST00000587339 RAD23BP54727 409 aa21.14■□□□□ 0.97
TRIM47-204ENST00000587339 FBXO47Q5MNV8 452 aa21.14■□□□□ 0.97
TRIM47-204ENST00000587339 C9orf57Q5W0N0 161 aa21.14■□□□□ 0.97
TRIM47-204ENST00000587339 MON1BQ7L1V2 547 aa21.14■□□□□ 0.97
TRIM47-204ENST00000587339 HACE1Q8IYU2 909 aa21.14■□□□□ 0.97
TRIM47-204ENST00000587339 TTC39CQ8N584 583 aa21.14■□□□□ 0.97
TRIM47-204ENST00000587339 TFAP2BQ92481 460 aa21.14■□□□□ 0.97
TRIM47-204ENST00000587339 ZSWIM1Q9BR11 485 aa21.14■□□□□ 0.97
TRIM47-204ENST00000587339 STARD7Q9NQZ5 370 aa21.14■□□□□ 0.97
TRIM47-204ENST00000587339 RNF14Q9UBS8 474 aa21.14■□□□□ 0.97
TRIM47-204ENST00000587339 PADI3Q9ULW8 664 aa21.14■□□□□ 0.97
TRIM47-204ENST00000587339 STXBP5LQ9Y2K9 1186 aa21.14■□□□□ 0.97
TRIM47-204ENST00000587339 TRIP11Q15643 1979 aa21.13■□□□□ 0.97
TRIM47-204ENST00000587339 KCNK3O14649 394 aa21.13■□□□□ 0.97
TRIM47-204ENST00000587339 PPEF2O14830 753 aa21.13■□□□□ 0.97
TRIM47-204ENST00000587339 LSM8O95777 96 aaKnown RBP21.13■□□□□ 0.97
TRIM47-204ENST00000587339 GHRP10912 638 aa21.13■□□□□ 0.97
TRIM47-204ENST00000587339 ATF7P17544 494 aaPredicted RBP21.13■□□□□ 0.97
TRIM47-204ENST00000587339 PAFAH1B1P43034 410 aa21.13■□□□□ 0.97
TRIM47-204ENST00000587339 C11orf63Q6NUN7 778 aa21.13■□□□□ 0.97
TRIM47-204ENST00000587339 SH3TC2Q8TF17 1288 aa21.13■□□□□ 0.97
TRIM47-204ENST00000587339 WHAMMQ8TF30 809 aa21.13■□□□□ 0.97
TRIM47-204ENST00000587339 VCPIP1Q96JH7 1222 aa21.13■□□□□ 0.97
TRIM47-204ENST00000587339 BEGAINQ9BUH8 593 aa21.13■□□□□ 0.97
TRIM47-204ENST00000587339 AVENQ9NQS1 362 aaPredicted RBP21.13■□□□□ 0.97
TRIM47-204ENST00000587339 ADAM22Q9P0K1 906 aa21.13■□□□□ 0.97
TRIM47-204ENST00000587339 PCDHGC3Q9UN70 934 aa21.13■□□□□ 0.97
TRIM47-204ENST00000587339 SNX9Q9Y5X1 595 aa21.13■□□□□ 0.97
TRIM47-204ENST00000587339 MED7O43513 233 aa21.12■□□□□ 0.97
TRIM47-204ENST00000587339 RRM1P23921 792 aa21.12■□□□□ 0.97
TRIM47-204ENST00000587339 CD52P31358 61 aa21.12■□□□□ 0.97
TRIM47-204ENST00000587339 INCA1Q0VD86 236 aa21.12■□□□□ 0.97
TRIM47-204ENST00000587339 PAK2Q13177 524 aa21.12■□□□□ 0.97
TRIM47-204ENST00000587339 CFAP221Q4G0U5 840 aa21.12■□□□□ 0.97
TRIM47-204ENST00000587339 PHF13Q86YI8 300 aaPredicted RBP21.12■□□□□ 0.97
TRIM47-204ENST00000587339 GPR161Q8N6U8 529 aaKnown RBP21.12■□□□□ 0.97
TRIM47-204ENST00000587339 TMEM35BQ8NCS4 154 aa21.12■□□□□ 0.97
TRIM47-204ENST00000587339 TMEM176AQ96HP8 235 aa21.12■□□□□ 0.97
TRIM47-204ENST00000587339 HES6Q96HZ4 224 aa21.12■□□□□ 0.97
TRIM47-204ENST00000587339 C11orf70Q9BRQ4 267 aa21.12■□□□□ 0.97
TRIM47-204ENST00000587339 ZNF518BQ9C0D4 1074 aa21.12■□□□□ 0.97
TRIM47-204ENST00000587339 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.12■□□□□ 0.972e-7■■■■□ 20.1
TRIM47-204ENST00000587339 HMGXB4Q9UGU5 601 aa21.12■□□□□ 0.97
TRIM47-204ENST00000587339 BARX2Q9UMQ3 279 aaPredicted RBP21.12■□□□□ 0.97
TRIM47-204ENST00000587339 CEP83Q9Y592 693 aa21.12■□□□□ 0.97
TRIM47-204ENST00000587339 ALG6Q9Y672 507 aa21.12■□□□□ 0.97
TRIM47-204ENST00000587339 ORC1Q13415 861 aa21.12■□□□□ 0.97
TRIM47-204ENST00000587339 TRIM71Q2Q1W2 868 aaKnown RBP21.12■□□□□ 0.97
TRIM47-204ENST00000587339 C2CD6Q53TS8 623 aa21.12■□□□□ 0.97
TRIM47-204ENST00000587339 LIN9Q5TKA1 542 aa21.12■□□□□ 0.97
TRIM47-204ENST00000587339 SLC4A11Q8NBS3 891 aa21.12■□□□□ 0.97
TRIM47-204ENST00000587339 TWNKQ96RR1 684 aa21.12■□□□□ 0.97
TRIM47-204ENST00000587339 OSBPL7Q9BZF2 842 aa21.12■□□□□ 0.97
TRIM47-204ENST00000587339 ERVK-5Q9HDB9 667 aa21.12■□□□□ 0.97
TRIM47-204ENST00000587339 CES2O00748 559 aa21.11■□□□□ 0.97
TRIM47-204ENST00000587339 ITGA4P13612 1032 aa21.11■□□□□ 0.97
TRIM47-204ENST00000587339 CYP3A5P20815 502 aa21.11■□□□□ 0.97
TRIM47-204ENST00000587339 LPIN1Q14693 890 aa21.11■□□□□ 0.97
TRIM47-204ENST00000587339 MESDQ14696 234 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms