RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 VSTM4Q8IW00 320 aa18.19■□□□□ 0.5
PRKCSH-203ENST00000586486 ARHGEF19Q8IW93 802 aa18.19■□□□□ 0.5
PRKCSH-203ENST00000586486 JAKMIP2Q96AA8 810 aa18.19■□□□□ 0.5
PRKCSH-203ENST00000586486 ELMO3Q96BJ8 720 aa18.19■□□□□ 0.5
PRKCSH-203ENST00000586486 C17orf80Q9BSJ5 609 aa18.19■□□□□ 0.5
PRKCSH-203ENST00000586486 GANQ9H2C0 597 aa18.19■□□□□ 0.5
PRKCSH-203ENST00000586486 NKX2-4Q9H2Z4 354 aa18.19■□□□□ 0.5
PRKCSH-203ENST00000586486 CYP3A43Q9HB55 503 aa18.19■□□□□ 0.5
PRKCSH-203ENST00000586486 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.19■□□□□ 0.53e-6■■■■■ 28.8
PRKCSH-203ENST00000586486 FAM207AQ9NSI2 230 aaPredicted RBP18.19■□□□□ 0.5
PRKCSH-203ENST00000586486 PCDHB8Q9UN66 801 aa18.19■□□□□ 0.5
PRKCSH-203ENST00000586486 POLIQ9UNA4 740 aa18.19■□□□□ 0.5
PRKCSH-203ENST00000586486 CYB561D2O14569 222 aa18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 SYN3O14994 580 aa18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 HUS1O60921 280 aa18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 TACC1O75410 805 aa18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 NOL4O94818 638 aa18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 CYP11A1P05108 521 aa18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 UCHL3P15374 230 aa18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 TYMPP19971 482 aa18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 FGFR3P22607 806 aa18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 APBA1Q02410 837 aa18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 SOWAHAQ2M3V2 549 aa18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 FIGNQ5HY92 759 aa18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 PPP2R2DQ66LE6 453 aa18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 DDX53Q86TM3 631 aaKnown RBP18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 TMEM86AQ8N2M4 240 aa18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 PPM1KQ8N3J5 372 aa18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 KLHL23Q8NBE8 558 aa18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 APPL2Q8NEU8 664 aa18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 NEK11Q8NG66 645 aa18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 IQCDQ96DY2 449 aa18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 PCMTD1Q96MG8 357 aaPredicted RBP18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 C11orf84Q9BUA3 381 aaPredicted RBP18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 VN1R3Q9BXE9 311 aa18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 GPR62Q9BZJ7 368 aa18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 SLC28A3Q9HAS3 691 aa18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 DSEQ9UL01 958 aa18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 L1RE1Q9UN81 338 aa18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 LZTS1Q9Y250 596 aa18.18■□□□□ 0.5
PRKCSH-203ENST00000586486 I3L4J1 428 aa18.17■□□□□ 0.5
PRKCSH-203ENST00000586486 KRT17Q04695 432 aa18.17■□□□□ 0.5
PRKCSH-203ENST00000586486 PTPN21Q16825 1174 aa18.17■□□□□ 0.5
PRKCSH-203ENST00000586486 SPECC1LQ69YQ0 1117 aa18.17■□□□□ 0.5
PRKCSH-203ENST00000586486 TIFAQ96CG3 184 aa18.17■□□□□ 0.5
PRKCSH-203ENST00000586486 MMS19Q96T76 1030 aa18.17■□□□□ 0.5
PRKCSH-203ENST00000586486 HERC2P3Q9BVR0 1158 aa18.17■□□□□ 0.5
PRKCSH-203ENST00000586486 NAA15Q9BXJ9 866 aaKnown RBP18.17■□□□□ 0.5
PRKCSH-203ENST00000586486 TTYH3Q9C0H2 523 aa18.17■□□□□ 0.5
PRKCSH-203ENST00000586486 SMYD3Q9H7B4 428 aa18.17■□□□□ 0.5
PRKCSH-203ENST00000586486 CHD9Q3L8U1 2897 aa18.17■□□□□ 0.5
PRKCSH-203ENST00000586486 EPHB6O15197 1021 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 SOD2P04179 222 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 UBE3AQ05086 875 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 INCA1Q0VD86 236 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 SCARA5Q6ZMJ2 495 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 SPRED2Q7Z698 418 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 PDCL2Q8N4E4 241 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 TTC39CQ8N584 583 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 UBR7Q8N806 425 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 KREMEN1Q96MU8 473 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 ARID3AQ99856 593 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 NUP58Q9BVL2 599 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 SDCBP2Q9H190 292 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 UBE2TQ9NPD8 197 aaPredicted RBP18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 CEP72Q9P209 647 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 FHOD1Q9Y613 1164 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 ADCY5O95622 1261 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 TRIM21P19474 475 aaKnown RBP18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 WARSP23381 471 aaKnown RBP18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 CDC25BP30305 580 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 MFAP3P55082 362 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 YWHAEP62258 255 aaKnown RBP18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 USP41Q3LFD5 358 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 FAM171A1Q5VUB5 890 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 IQCEQ6IPM2 695 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 GJB7Q6PEY0 223 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 RRAGAQ7L523 313 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 GPR65Q8IYL9 337 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 ADGRF2Q8IZF7 708 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 KBTBD7Q8WVZ9 684 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 EDEM3Q9BZQ6 932 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 CHST7Q9NS84 486 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 DNAJC12Q9UKB3 198 aa18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 AJAP1Q9UKB5 411 aaPredicted RBP18.16■□□□□ 0.5
PRKCSH-203ENST00000586486 COL4A4P53420 1690 aaPredicted RBP18.15■□□□□ 0.5
PRKCSH-203ENST00000586486 GABRDO14764 452 aa18.15■□□□□ 0.5
PRKCSH-203ENST00000586486 TKTP29401 623 aaKnown RBP18.15■□□□□ 0.5
PRKCSH-203ENST00000586486 POLR2FP61218 127 aaKnown RBP18.15■□□□□ 0.5
PRKCSH-203ENST00000586486 TRIM14Q14142 442 aa18.15■□□□□ 0.5
PRKCSH-203ENST00000586486 WSCD1Q658N2 575 aa18.15■□□□□ 0.5
PRKCSH-203ENST00000586486 FBXO22Q8NEZ5 403 aa18.15■□□□□ 0.5
PRKCSH-203ENST00000586486 KAT5Q92993 513 aa18.15■□□□□ 0.5
PRKCSH-203ENST00000586486 TTPALQ9BTX7 342 aa18.15■□□□□ 0.5
PRKCSH-203ENST00000586486 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.15■□□□□ 0.56e-14■■■■■ 40.5
PRKCSH-203ENST00000586486 A0A1W2PQJ5 194 aa18.14■□□□□ 0.49
PRKCSH-203ENST00000586486 H3BNC9 293 aa18.14■□□□□ 0.49
PRKCSH-203ENST00000586486 OAZ2O95190 189 aa18.14■□□□□ 0.49
PRKCSH-203ENST00000586486 WEE2P0C1S8 567 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms