RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 PMS2P54278 862 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 BEX3Q00994 111 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 NOL9Q5SY16 702 aaKnown RBP13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 PRRT2Q7Z6L0 340 aaPredicted RBP13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 ABRAQ8N0Z2 381 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 MICALL1Q8N3F8 863 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 ACKR2O00590 384 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 MAGEB2O15479 319 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 NFICP08651 508 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 RARAP10276 462 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 TRIM72Q6ZMU5 477 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 TAS1R3Q7RTX0 852 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 PLEKHH3Q7Z736 793 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 PRUNE1Q86TP1 453 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 FEZF2Q8TBJ5 459 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 C9orf72Q96LT7 481 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 SNX25Q9H3E2 840 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 VIPAS39Q9H9C1 493 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 APOBEC3GQ9HC16 384 aaKnown RBP13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 CDK5RAP2Q96SN8 1893 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 A8MXQ7 604 aa13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 PODXLO00592 558 aa13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 WNT7BP56706 349 aa13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 BASP1P80723 227 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 TMEM192Q8IY95 271 aa13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 ACO2Q99798 780 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 NTPCRQ9BSD7 190 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 CDT1Q9H211 546 aa13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 ST6GALNAC4Q9H4F1 302 aa13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 INPP5FQ9Y2H2 1132 aa13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 HEY1Q9Y5J3 304 aa13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 AKAP5P24588 427 aa13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 ARL2P36404 184 aa13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 COILP38432 576 aaPredicted RBP13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 SMAD1Q15797 465 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 SH3D19Q5HYK7 790 aa13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 ZC3H18Q86VM9 953 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 OTUD6BQ8N6M0 293 aa13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 PCYT2Q99447 389 aa13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 DNAI2Q9GZS0 605 aa13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 SPC25Q9HBM1 224 aa13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 IP6K2Q9UHH9 426 aa13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 RASGRF2O14827 1237 aa13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 NEBLO76041 1014 aa13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 SLC8A3P57103 927 aa13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 RPL7AP62424 266 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 DGKDQ16760 1214 aa13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 JADE1Q6IE81 842 aa13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 ZPBP2Q6X784 338 aa13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 CCDC33Q8N5R6 958 aa13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 LMO3Q8TAP4 145 aa13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 PTPRJQ12913 1337 aa13.19□□□□□ -0.3
SMARCA4-208ENST00000585799 ASAP2O43150 1006 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 FLT3P36888 993 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 GPS1Q13098 491 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 GRIK4Q16099 956 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 FAM182AQ5T1J6 154 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 PPP1R21Q6ZMI0 780 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 WDR49Q8IV35 697 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 RNF34Q969K3 372 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 HES6Q96HZ4 224 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 RPS6KC1Q96S38 1066 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 METTL5Q9NRN9 209 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 SNTG2Q9NY99 539 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 FAM187AA6NFU0 413 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 ACOT1Q86TX2 421 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 SMYD3Q9H7B4 428 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 C10orf88Q9H8K7 445 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 SAYSD1Q9NPB0 183 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 CHST7Q9NS84 486 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 GLTPD2A6NH11 291 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 F8VP50 259 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 PRPSAP2O60256 369 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 ZC3H11AO75152 810 aaKnown RBP eCLIP13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 C4BPAP04003 597 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 MYBL1P10243 752 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 ICAM3P32942 547 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 PSMC4P43686 418 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 AP3M2P53677 418 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 SEC24CP53992 1094 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 DHX34Q14147 1143 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 SLC29A2Q14542 456 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 ZKSCAN8Q15776 578 aaPredicted RBP13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 BBS9Q3SYG4 887 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 CTAGE3PQ8IX95 158 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 DNAJB3Q8WWF6 145 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 ATP6V1G3Q96LB4 118 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 MINDY3Q9H8M7 445 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 NOCTQ9UK39 431 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 TTLL3Q9Y4R7 772 aa13.18□□□□□ -0.3
SMARCA4-208ENST00000585799 SYF2O95926 243 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-208ENST00000585799 LCP1P13796 627 aa13.17□□□□□ -0.3
SMARCA4-208ENST00000585799 KYNUQ16719 465 aa13.17□□□□□ -0.3
SMARCA4-208ENST00000585799 IZUMO3Q5VZ72 239 aa13.17□□□□□ -0.3
SMARCA4-208ENST00000585799 MAGED2Q9UNF1 606 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-208ENST00000585799 DLEC1Q9Y238 1755 aa13.17□□□□□ -0.3
SMARCA4-208ENST00000585799 CAPN9O14815 690 aa13.17□□□□□ -0.3
SMARCA4-208ENST00000585799 RTP1P59025 263 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms