RNA–Protein interactions for RNA: ENST00000584620.5

PGAP3-209, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 3

Gene PGAP3, Length 804 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-209ENST00000584620 DDX1Q92499 740 aaKnown RBP11.77□□□□□ -0.53
PGAP3-209ENST00000584620 KIF12Q96FN5 646 aa11.77□□□□□ -0.53
PGAP3-209ENST00000584620 LRRC3Q9BY71 257 aa11.77□□□□□ -0.53
PGAP3-209ENST00000584620 LARSQ9P2J5 1176 aaKnown RBP11.77□□□□□ -0.53
PGAP3-209ENST00000584620 KCNG1Q9UIX4 513 aa11.77□□□□□ -0.53
PGAP3-209ENST00000584620 MAFFQ9ULX9 164 aa11.77□□□□□ -0.53
PGAP3-209ENST00000584620 A0A0B4J269 797 aa11.76□□□□□ -0.53
PGAP3-209ENST00000584620 H3BQV1 296 aa11.76□□□□□ -0.53
PGAP3-209ENST00000584620 NCAM2O15394 837 aa11.76□□□□□ -0.53
PGAP3-209ENST00000584620 LRP3O75074 770 aa11.76□□□□□ -0.53
PGAP3-209ENST00000584620 ZIC2O95409 532 aaPredicted RBP11.76□□□□□ -0.53
PGAP3-209ENST00000584620 TDGF1P13385 188 aa11.76□□□□□ -0.53
PGAP3-209ENST00000584620 GJA1P17302 382 aa11.76□□□□□ -0.53
PGAP3-209ENST00000584620 SRSF5Q13243 272 aaKnown RBP11.76□□□□□ -0.53
PGAP3-209ENST00000584620 SIM2Q14190 667 aaPredicted RBP11.76□□□□□ -0.53
PGAP3-209ENST00000584620 VITQ6UXI7 678 aa11.76□□□□□ -0.53
PGAP3-209ENST00000584620 GPBP1Q86WP2 473 aa11.76□□□□□ -0.53
PGAP3-209ENST00000584620 TMC8Q8IU68 726 aa11.76□□□□□ -0.53
PGAP3-209ENST00000584620 MAP4K3Q8IVH8 894 aa11.76□□□□□ -0.53
PGAP3-209ENST00000584620 BICD1Q96G01 975 aa11.76□□□□□ -0.53
PGAP3-209ENST00000584620 CDK5RAP3Q96JB5 506 aa11.76□□□□□ -0.53
PGAP3-209ENST00000584620 AK8Q96MA6 479 aa11.76□□□□□ -0.53
PGAP3-209ENST00000584620 FAM126AQ9BYI3 521 aaPredicted RBP11.76□□□□□ -0.53
PGAP3-209ENST00000584620 DNAJC25Q9H1X3 360 aa11.76□□□□□ -0.53
PGAP3-209ENST00000584620 ZFP14Q9HCL3 533 aa11.76□□□□□ -0.53
PGAP3-209ENST00000584620 ODF2LQ9ULJ1 636 aa11.76□□□□□ -0.53
PGAP3-209ENST00000584620 TBX20Q9UMR3 447 aa11.76□□□□□ -0.53
PGAP3-209ENST00000584620 UBQLN1Q9UMX0 589 aaKnown RBP11.76□□□□□ -0.53
PGAP3-209ENST00000584620 YIPF1Q9Y548 306 aa11.76□□□□□ -0.53
PGAP3-209ENST00000584620 GTF3C3Q9Y5Q9 886 aa11.76□□□□□ -0.53
PGAP3-209ENST00000584620 FRYQ5TBA9 3013 aa11.76□□□□□ -0.53
PGAP3-209ENST00000584620 SDK1Q7Z5N4 2213 aa11.75□□□□□ -0.53
PGAP3-209ENST00000584620 H0YCG3 227 aa11.75□□□□□ -0.53
PGAP3-209ENST00000584620 OGTO15294 1046 aa11.75□□□□□ -0.53
PGAP3-209ENST00000584620 SLC26A4O43511 780 aa11.75□□□□□ -0.53
PGAP3-209ENST00000584620 CPB1P15086 417 aa11.75□□□□□ -0.53
PGAP3-209ENST00000584620 PLCG1P19174 1290 aa11.75□□□□□ -0.53
PGAP3-209ENST00000584620 MARCKSP29966 332 aaPredicted RBP11.75□□□□□ -0.53
PGAP3-209ENST00000584620 VIPR2P41587 438 aa11.75□□□□□ -0.53
PGAP3-209ENST00000584620 MATR3P43243 847 aaKnown RBP eCLIP11.75□□□□□ -0.53
PGAP3-209ENST00000584620 RPS9P46781 194 aaKnown RBP11.75□□□□□ -0.53
PGAP3-209ENST00000584620 LIG4P49917 911 aa11.75□□□□□ -0.53
PGAP3-209ENST00000584620 YWHAHQ04917 246 aaPredicted RBP11.75□□□□□ -0.53
PGAP3-209ENST00000584620 DHX8Q14562 1220 aaKnown RBP11.75□□□□□ -0.53
PGAP3-209ENST00000584620 MCM6Q14566 821 aa11.75□□□□□ -0.53
PGAP3-209ENST00000584620 KARSQ15046 597 aaKnown RBP11.75□□□□□ -0.53
PGAP3-209ENST00000584620 CYP4A22Q5TCH4 519 aa11.75□□□□□ -0.53
PGAP3-209ENST00000584620 SPATA1Q5VX52 437 aa11.75□□□□□ -0.53
PGAP3-209ENST00000584620 IQCEQ6IPM2 695 aa11.75□□□□□ -0.53
PGAP3-209ENST00000584620 LRSAM1Q6UWE0 723 aa11.75□□□□□ -0.53
PGAP3-209ENST00000584620 ZNF852Q6ZMS4 543 aa11.75□□□□□ -0.53
PGAP3-209ENST00000584620 MYCT1Q8N699 235 aa11.75□□□□□ -0.53
PGAP3-209ENST00000584620 SHKBP1Q8TBC3 707 aa11.75□□□□□ -0.53
PGAP3-209ENST00000584620 DNASE1L2Q92874 299 aa11.75□□□□□ -0.53
PGAP3-209ENST00000584620 SMARCD2Q92925 531 aa11.75□□□□□ -0.53
PGAP3-209ENST00000584620 RSPRY1Q96DX4 576 aa11.75□□□□□ -0.53
PGAP3-209ENST00000584620 ZNF512Q96ME7 567 aaPredicted RBP11.75□□□□□ -0.53
PGAP3-209ENST00000584620 PGLYRP2Q96PD5 576 aa11.75□□□□□ -0.53
PGAP3-209ENST00000584620 TMEM209Q96SK2 561 aa11.75□□□□□ -0.53
PGAP3-209ENST00000584620 NELL2Q99435 816 aa11.75□□□□□ -0.53
PGAP3-209ENST00000584620 TRMT61BQ9BVS5 477 aaKnown RBP11.75□□□□□ -0.53
PGAP3-209ENST00000584620 TRPV4Q9HBA0 871 aa11.75□□□□□ -0.53
PGAP3-209ENST00000584620 RXFP3Q9NSD7 469 aa11.75□□□□□ -0.53
PGAP3-209ENST00000584620 CPSF3Q9UKF6 684 aaKnown RBP11.75□□□□□ -0.53
PGAP3-209ENST00000584620 NDRG2Q9UN36 371 aaKnown RBP11.75□□□□□ -0.53
PGAP3-209ENST00000584620 TRIP11Q15643 1979 aa11.75□□□□□ -0.53
PGAP3-209ENST00000584620 F5P12259 2224 aa11.74□□□□□ -0.53
PGAP3-209ENST00000584620 TISP43B9A030 160 aa11.74□□□□□ -0.53
PGAP3-209ENST00000584620 ANKRD63C9JTQ0 380 aa11.74□□□□□ -0.53
PGAP3-209ENST00000584620 K7ENM7 598 aa11.74□□□□□ -0.53
PGAP3-209ENST00000584620 ARNTLO00327 626 aa11.74□□□□□ -0.53
PGAP3-209ENST00000584620 TM4SF5O14894 197 aa11.74□□□□□ -0.53
PGAP3-209ENST00000584620 HNRNPDLO14979 420 aaKnown RBP11.74□□□□□ -0.53
PGAP3-209ENST00000584620 HRO43593 1189 aa11.74□□□□□ -0.53
PGAP3-209ENST00000584620 MYL4P12829 197 aa11.74□□□□□ -0.53
PGAP3-209ENST00000584620 SPINK2P20155 84 aa11.74□□□□□ -0.53
PGAP3-209ENST00000584620 UBA7P41226 1012 aa11.74□□□□□ -0.53
PGAP3-209ENST00000584620 NRLP54845 237 aa11.74□□□□□ -0.53
PGAP3-209ENST00000584620 LILRA4P59901 499 aa11.74□□□□□ -0.53
PGAP3-209ENST00000584620 PPP2R3AQ06190 1150 aa11.74□□□□□ -0.53
PGAP3-209ENST00000584620 RING1Q06587 406 aa11.74□□□□□ -0.53
PGAP3-209ENST00000584620 DUSP4Q13115 394 aa11.74□□□□□ -0.53
PGAP3-209ENST00000584620 GPR17Q13304 367 aa11.74□□□□□ -0.53
PGAP3-209ENST00000584620 SF3A2Q15428 464 aaKnown RBP11.74□□□□□ -0.53
PGAP3-209ENST00000584620 TEAD2Q15562 447 aa11.74□□□□□ -0.53
PGAP3-209ENST00000584620 CCDC6Q16204 474 aa11.74□□□□□ -0.53
PGAP3-209ENST00000584620 AASDHQ4L235 1098 aaPredicted RBP11.74□□□□□ -0.53
PGAP3-209ENST00000584620 JADE1Q6IE81 842 aa11.74□□□□□ -0.53
PGAP3-209ENST00000584620 CENPPQ6IPU0 288 aa11.74□□□□□ -0.53
PGAP3-209ENST00000584620 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.74□□□□□ -0.53
PGAP3-209ENST00000584620 ELMOD1Q8N336 334 aa11.74□□□□□ -0.53
PGAP3-209ENST00000584620 TTC9BQ8N6N2 239 aa11.74□□□□□ -0.53
PGAP3-209ENST00000584620 ZSCAN18Q8TBC5 510 aaPredicted RBP11.74□□□□□ -0.53
PGAP3-209ENST00000584620 RAD54LQ92698 747 aa11.74□□□□□ -0.53
PGAP3-209ENST00000584620 MKNK1Q9BUB5 465 aa11.74□□□□□ -0.53
PGAP3-209ENST00000584620 IKZF4Q9H2S9 585 aa11.74□□□□□ -0.53
PGAP3-209ENST00000584620 BRD9Q9H8M2 597 aa11.74□□□□□ -0.53
PGAP3-209ENST00000584620 RPF1Q9H9Y2 349 aaKnown RBP11.74□□□□□ -0.53
PGAP3-209ENST00000584620 PARVGQ9HBI0 331 aa11.74□□□□□ -0.53
PGAP3-209ENST00000584620 ZNF334Q9HCZ1 680 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms