RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 NPHP3-ACAD11A0A0J9YXS1 232 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 FKBP6O75344 327 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 KCNK10P57789 538 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 NFX1Q12986 1120 aaKnown RBP13.64□□□□□ -0.23
RNF43-208ENST00000584437 FIGNQ5HY92 759 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 ACBD5Q5T8D3 534 aaPredicted RBP13.64□□□□□ -0.23
RNF43-208ENST00000584437 C12orf60Q5U649 245 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 ELMO2Q96JJ3 720 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 MCEEQ96PE7 176 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 TMEM245Q9H330 911 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 A2ML1A8K2U0 1454 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 LOC100653049A0A140TA62 436 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 FAM205CA6NFA0 338 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 RASSF9O75901 435 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 KRT34O76011 436 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 THRAP10827 490 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 CALB2P22676 271 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 SMAD1Q15797 465 aaKnown RBP13.64□□□□□ -0.23
RNF43-208ENST00000584437 ANO4Q32M45 955 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 SNRNP27Q8WVK2 155 aaKnown RBP13.64□□□□□ -0.23
RNF43-208ENST00000584437 GTF3C4Q9UKN8 822 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 PNMA3Q9UL41 463 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 ARHGEF40Q8TER5 1519 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 ADGRA3Q8IWK6 1321 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 DFFAO00273 331 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 H2AFYO75367 372 aaKnown RBP13.64□□□□□ -0.23
RNF43-208ENST00000584437 DGAT1O75907 488 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 BAG6P46379 1132 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 CPA2P48052 419 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 IREB2P48200 963 aaKnown RBP13.64□□□□□ -0.23
RNF43-208ENST00000584437 SGSM1Q2NKQ1 1148 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 TWF2Q6IBS0 349 aaKnown RBP13.64□□□□□ -0.23
RNF43-208ENST00000584437 PLEKHM3Q6ZWE6 761 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 JADE3Q92613 823 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 KLF6Q99612 283 aaPredicted RBP13.64□□□□□ -0.23
RNF43-208ENST00000584437 CAB39Q9Y376 341 aaPredicted RBP13.64□□□□□ -0.23
RNF43-208ENST00000584437 KCNJ1P48048 391 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 SNRNP35Q16560 246 aaKnown RBP13.64□□□□□ -0.23
RNF43-208ENST00000584437 SNRNP48Q6IEG0 339 aaKnown RBP13.64□□□□□ -0.23
RNF43-208ENST00000584437 SCUBE1Q8IWY4 988 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 SPATA18Q8TC71 538 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 SCFD2Q8WU76 684 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 PHF21AQ96BD5 680 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 RMDN1Q96DB5 314 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 ZSWIM1Q9BR11 485 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 MYO5CQ9NQX4 1742 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 NFIBO00712 420 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 USP1O94782 785 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 PSMC3P17980 439 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 NPEPPSP55786 919 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 FOXO4P98177 505 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 BTBD8Q5XKL5 378 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 BBS7Q8IWZ6 715 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 EFHBQ8N7U6 833 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 B4GALNT2Q8NHY0 566 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 FAM162AQ96A26 154 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 SIK2Q9H0K1 926 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 TMEM161AQ9NX61 479 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 WHRNQ9P202 907 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 HAO1Q9UJM8 370 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 APPL1Q9UKG1 709 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 RAD17O75943 681 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 RBP3P10745 1247 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 TCN1P20061 433 aaPredicted RBP13.63□□□□□ -0.23
RNF43-208ENST00000584437 RAD51Q06609 339 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 RBM43Q6ZSC3 357 aaKnown RBP13.63□□□□□ -0.23
RNF43-208ENST00000584437 PAPOLBQ9NRJ5 636 aaKnown RBP13.63□□□□□ -0.23
RNF43-208ENST00000584437 MYO1GB0I1T2 1018 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 C5orf58C9J3I9 102 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 SNUPNO95149 360 aaKnown RBP13.63□□□□□ -0.23
RNF43-208ENST00000584437 PSMA4P25789 261 aaKnown RBP13.63□□□□□ -0.23
RNF43-208ENST00000584437 ERVK-24P63145 666 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 PDK1Q15118 436 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 WDR72Q3MJ13 1102 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 SBK1Q52WX2 424 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 MARCH10Q8NA82 808 aaPredicted RBP13.63□□□□□ -0.23
RNF43-208ENST00000584437 TMEM8AQ9HCN3 771 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 EXOSC4Q9NPD3 245 aaKnown RBP13.63□□□□□ -0.23
RNF43-208ENST00000584437 TRIM49D1C9J1S8 452 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 MTSS1O43312 755 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 GSNP06396 782 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 SULT1E1P49888 294 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 TRIM28Q13263 835 aaKnown RBP13.63□□□□□ -0.23
RNF43-208ENST00000584437 USP49Q70CQ1 688 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 ACTRT1Q8TDG2 376 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 KIF12Q96FN5 646 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 FAR2Q96K12 515 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 MED15Q96RN5 788 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 RGL1Q9NZL6 768 aa13.63□□□□□ -0.23
RNF43-208ENST00000584437 KANSL1LA0AUZ9 987 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 CST8O60676 142 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 ATP6V1G2O95670 118 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 STIP1P31948 543 aaKnown RBP13.62□□□□□ -0.23
RNF43-208ENST00000584437 NUDT2P50583 147 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 COBLL1Q53SF7 1204 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 MFN1Q8IWA4 741 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 KCNB2Q92953 911 aa13.62□□□□□ -0.23
RNF43-208ENST00000584437 ILKAPQ9H0C8 392 aaPredicted RBP13.62□□□□□ -0.23
RNF43-208ENST00000584437 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.62□□□□□ -0.23
RNF43-208ENST00000584437 GLRA3O75311 464 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms