RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 TNFSF13BQ9Y275 285 aa12.19□□□□□ -0.46
CCDC47-206ENST00000584112 GDAQ9Y2T3 454 aa12.19□□□□□ -0.46
CCDC47-206ENST00000584112 EML5Q05BV3 1969 aa12.19□□□□□ -0.46
CCDC47-206ENST00000584112 VWA3AA6NCI4 1184 aa12.18□□□□□ -0.46
CCDC47-206ENST00000584112 CASTOR2A6NHX0 329 aa12.18□□□□□ -0.46
CCDC47-206ENST00000584112 CDX4O14627 284 aaPredicted RBP12.18□□□□□ -0.46
CCDC47-206ENST00000584112 GUCY2CP25092 1073 aa12.18□□□□□ -0.46
CCDC47-206ENST00000584112 SMTNP53814 917 aa12.18□□□□□ -0.46
CCDC47-206ENST00000584112 YARSP54577 528 aaKnown RBP12.18□□□□□ -0.46
CCDC47-206ENST00000584112 CACNB1Q02641 598 aaPredicted RBP12.18□□□□□ -0.46
CCDC47-206ENST00000584112 ZNF568Q3ZCX4 644 aa12.18□□□□□ -0.46
CCDC47-206ENST00000584112 PDXDC1Q6P996 788 aa12.18□□□□□ -0.46
CCDC47-206ENST00000584112 C1orf186Q6ZWK4 172 aa12.18□□□□□ -0.46
CCDC47-206ENST00000584112 KCNK18Q7Z418 384 aa12.18□□□□□ -0.46
CCDC47-206ENST00000584112 BRAPQ7Z569 592 aa12.18□□□□□ -0.46
CCDC47-206ENST00000584112 DAW1Q8N136 415 aa12.18□□□□□ -0.46
CCDC47-206ENST00000584112 AK8Q96MA6 479 aa12.18□□□□□ -0.46
CCDC47-206ENST00000584112 UROC1Q96N76 676 aa12.18□□□□□ -0.46
CCDC47-206ENST00000584112 ACO2Q99798 780 aaKnown RBP12.18□□□□□ -0.46
CCDC47-206ENST00000584112 CCDC94Q9BW85 323 aaPredicted RBP12.18□□□□□ -0.46
CCDC47-206ENST00000584112 TOPORSQ9NS56 1045 aaPredicted RBP12.18□□□□□ -0.46
CCDC47-206ENST00000584112 ARHGAP28Q9P2N2 729 aa12.18□□□□□ -0.46
CCDC47-206ENST00000584112 USP20Q9Y2K6 914 aa12.18□□□□□ -0.46
CCDC47-206ENST00000584112 NUP205Q92621 2012 aa12.18□□□□□ -0.46
CCDC47-206ENST00000584112 NOTCH4Q99466 2003 aa12.17□□□□□ -0.46
CCDC47-206ENST00000584112 KIF4AO95239 1232 aa12.17□□□□□ -0.46
CCDC47-206ENST00000584112 GRM5P41594 1212 aa12.17□□□□□ -0.46
CCDC47-206ENST00000584112 PXNP49023 591 aaPredicted RBP12.17□□□□□ -0.46
CCDC47-206ENST00000584112 STRN3Q13033 797 aa12.17□□□□□ -0.46
CCDC47-206ENST00000584112 MAPK7Q13164 816 aa12.17□□□□□ -0.46
CCDC47-206ENST00000584112 NAB2Q15742 525 aa12.17□□□□□ -0.46
CCDC47-206ENST00000584112 FAM171A1Q5VUB5 890 aa12.17□□□□□ -0.46
CCDC47-206ENST00000584112 CACNA2D4Q7Z3S7 1137 aa12.17□□□□□ -0.46
CCDC47-206ENST00000584112 WDR5BQ86VZ2 330 aa12.17□□□□□ -0.46
CCDC47-206ENST00000584112 PALB2Q86YC2 1186 aa12.17□□□□□ -0.46
CCDC47-206ENST00000584112 SYT2Q8N9I0 419 aaPredicted RBP12.17□□□□□ -0.46
CCDC47-206ENST00000584112 RABGGTAQ92696 567 aa12.17□□□□□ -0.46
CCDC47-206ENST00000584112 CALML4Q96GE6 196 aa12.17□□□□□ -0.46
CCDC47-206ENST00000584112 B3GALT6Q96L58 329 aa12.17□□□□□ -0.46
CCDC47-206ENST00000584112 PAAF1Q9BRP4 392 aa12.17□□□□□ -0.46
CCDC47-206ENST00000584112 TTPALQ9BTX7 342 aa12.17□□□□□ -0.46
CCDC47-206ENST00000584112 TMEM9BQ9NQ34 198 aa12.17□□□□□ -0.46
CCDC47-206ENST00000584112 PCDHGA5Q9Y5G8 931 aa12.17□□□□□ -0.46
CCDC47-206ENST00000584112 H0YCG3 227 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 TMEM189-UBE2V1I3L0A0 370 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 SLC16A4O15374 487 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 TGM5O43548 720 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 WISP1O95388 367 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 PLA2G4BP0C869 781 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 MCF2P10911 925 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 PLS3P13797 630 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 PDCP20941 246 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 FSHRP23945 695 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 FAM193AP78312 1265 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 NTHL1P78549 312 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 CFHR1Q03591 330 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 PSMD5Q16401 504 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 TMEM119Q4V9L6 283 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 COLEC12Q5KU26 742 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 RTP2Q5QGT7 225 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 MPZL3Q6UWV2 235 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 CEP57Q86XR8 500 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 GLYCTKQ8IVS8 523 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 PIP4K2CQ8TBX8 421 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 HASPINQ8TF76 798 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 SPIRE2Q8WWL2 714 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 PNMA5Q96PV4 448 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 PPP1R10Q96QC0 940 aaKnown RBP12.16□□□□□ -0.46
CCDC47-206ENST00000584112 NTPCRQ9BSD7 190 aaKnown RBP12.16□□□□□ -0.46
CCDC47-206ENST00000584112 TCHPQ9BT92 498 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 IER2Q9BTL4 223 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 PLA2G2FQ9BZM2 168 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 CDT1Q9H211 546 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 PTPRHQ9HD43 1115 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 RBM12Q9NTZ6 932 aaKnown RBP12.16□□□□□ -0.46
CCDC47-206ENST00000584112 SLC38A7Q9NVC3 462 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 ZDHHC7Q9NXF8 308 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 CACNG4Q9UBN1 327 aa12.16□□□□□ -0.46
CCDC47-206ENST00000584112 SFI1A8K8P3 1242 aa12.15□□□□□ -0.46
CCDC47-206ENST00000584112 TRAPPC3O43617 180 aa12.15□□□□□ -0.46
CCDC47-206ENST00000584112 RPP40O75818 363 aaKnown RBP12.15□□□□□ -0.46
CCDC47-206ENST00000584112 PAPLNO95428 1278 aa12.15□□□□□ -0.46
CCDC47-206ENST00000584112 PROZP22891 400 aa12.15□□□□□ -0.46
CCDC47-206ENST00000584112 UBA7P41226 1012 aa12.15□□□□□ -0.46
CCDC47-206ENST00000584112 SLC12A3P55017 1021 aa12.15□□□□□ -0.46
CCDC47-206ENST00000584112 RAD51AP2Q09MP3 1159 aa12.15□□□□□ -0.46
CCDC47-206ENST00000584112 CUL4AQ13619 759 aa12.15□□□□□ -0.46
CCDC47-206ENST00000584112 GLRA4Q5JXX5 417 aa12.15□□□□□ -0.46
CCDC47-206ENST00000584112 LIN9Q5TKA1 542 aa12.15□□□□□ -0.46
CCDC47-206ENST00000584112 LILRA6Q6PI73 481 aa12.15□□□□□ -0.46
CCDC47-206ENST00000584112 PRSS55Q6UWB4 352 aaPredicted RBP12.15□□□□□ -0.46
CCDC47-206ENST00000584112 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.15□□□□□ -0.46
CCDC47-206ENST00000584112 TAS1R3Q7RTX0 852 aa12.15□□□□□ -0.46
CCDC47-206ENST00000584112 RAB44Q7Z6P3 723 aaPredicted RBP12.15□□□□□ -0.46
CCDC47-206ENST00000584112 FAM181AQ8N9Y4 354 aa12.15□□□□□ -0.46
CCDC47-206ENST00000584112 GAB3Q8WWW8 586 aa12.15□□□□□ -0.46
CCDC47-206ENST00000584112 ACAP3Q96P50 834 aa12.15□□□□□ -0.46
CCDC47-206ENST00000584112 PLIN2Q99541 437 aa12.15□□□□□ -0.46
CCDC47-206ENST00000584112 TARS2Q9BW92 718 aaKnown RBP12.15□□□□□ -0.46
CCDC47-206ENST00000584112 LARSQ9P2J5 1176 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms