RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 MMS19Q96T76 1030 aa15.06■□□□□ 0
GGA3-216ENST00000583282 VPS16Q9H269 839 aa15.06■□□□□ 0
GGA3-216ENST00000583282 SMYD3Q9H7B4 428 aa15.06■□□□□ 0
GGA3-216ENST00000583282 MRPL17Q9NRX2 175 aaKnown RBP15.06■□□□□ 0
GGA3-216ENST00000583282 GCNT4Q9P109 453 aa15.06■□□□□ 0
GGA3-216ENST00000583282 L1RE1Q9UN81 338 aa15.06■□□□□ 0
GGA3-216ENST00000583282 M0QZQ0 153 aa15.05■□□□□ -0
GGA3-216ENST00000583282 SYN3O14994 580 aa15.05■□□□□ -0
GGA3-216ENST00000583282 HUS1O60921 280 aa15.05■□□□□ -0
GGA3-216ENST00000583282 TPM2P07951 284 aa15.05■□□□□ -0
GGA3-216ENST00000583282 ZNF18P17022 549 aa15.05■□□□□ -0
GGA3-216ENST00000583282 CDK11BP21127 795 aaKnown RBP15.05■□□□□ -0
GGA3-216ENST00000583282 ATICP31939 592 aa15.05■□□□□ -0
GGA3-216ENST00000583282 TPM4P67936 248 aa15.05■□□□□ -0
GGA3-216ENST00000583282 YWHAHQ04917 246 aaPredicted RBP15.05■□□□□ -0
GGA3-216ENST00000583282 BMS1Q14692 1282 aaKnown RBP15.05■□□□□ -0
GGA3-216ENST00000583282 WDR72Q3MJ13 1102 aa15.05■□□□□ -0
GGA3-216ENST00000583282 VWA3BQ502W6 1294 aa15.05■□□□□ -0
GGA3-216ENST00000583282 MIIPQ5JXC2 388 aa15.05■□□□□ -0
GGA3-216ENST00000583282 WSCD1Q658N2 575 aa15.05■□□□□ -0
GGA3-216ENST00000583282 ZNF280DQ6N043 979 aa15.05■□□□□ -0
GGA3-216ENST00000583282 RBM23Q86U06 439 aaKnown RBP15.05■□□□□ -0
GGA3-216ENST00000583282 ADGRF2Q8IZF7 708 aa15.05■□□□□ -0
GGA3-216ENST00000583282 PDCL2Q8N4E4 241 aa15.05■□□□□ -0
GGA3-216ENST00000583282 CRACR2AQ9BSW2 395 aa15.05■□□□□ -0
GGA3-216ENST00000583282 APOBEC3GQ9HC16 384 aaKnown RBP15.05■□□□□ -0
GGA3-216ENST00000583282 RAB20Q9NX57 234 aa15.05■□□□□ -0
GGA3-216ENST00000583282 MTMR10Q9NXD2 777 aa15.05■□□□□ -0
GGA3-216ENST00000583282 STK39Q9UEW8 545 aa15.05■□□□□ -0
GGA3-216ENST00000583282 MTCH2Q9Y6C9 303 aa15.05■□□□□ -0
GGA3-216ENST00000583282 ARHGEF37A1IGU5 675 aa15.04■□□□□ -0
GGA3-216ENST00000583282 C2orf71A6NGG8 1288 aa15.04■□□□□ -0
GGA3-216ENST00000583282 HCRTO43612 131 aa15.04■□□□□ -0
GGA3-216ENST00000583282 CXCL14O95715 111 aa15.04■□□□□ -0
GGA3-216ENST00000583282 ASS1P00966 412 aaKnown RBP15.04■□□□□ -0
GGA3-216ENST00000583282 COPB1P53618 953 aaKnown RBP15.04■□□□□ -0
GGA3-216ENST00000583282 ARPP19P56211 112 aa15.04■□□□□ -0
GGA3-216ENST00000583282 CETN1Q12798 172 aa15.04■□□□□ -0
GGA3-216ENST00000583282 CTXN3Q4LDR2 81 aa15.04■□□□□ -0
GGA3-216ENST00000583282 TCEAL5Q5H9L2 206 aa15.04■□□□□ -0
GGA3-216ENST00000583282 OVOS1Q6IE37 1185 aa15.04■□□□□ -0
GGA3-216ENST00000583282 OSTM1Q86WC4 334 aa15.04■□□□□ -0
GGA3-216ENST00000583282 METTL23Q86XA0 190 aa15.04■□□□□ -0
GGA3-216ENST00000583282 APPL2Q8NEU8 664 aa15.04■□□□□ -0
GGA3-216ENST00000583282 PIK3R5Q8WYR1 880 aa15.04■□□□□ -0
GGA3-216ENST00000583282 NIF3L1Q9GZT8 377 aa15.04■□□□□ -0
GGA3-216ENST00000583282 INTS2Q9H0H0 1204 aaKnown RBP15.04■□□□□ -0
GGA3-216ENST00000583282 NDST4Q9H3R1 872 aa15.04■□□□□ -0
GGA3-216ENST00000583282 NSUN3Q9H649 340 aaKnown RBP15.04■□□□□ -0
GGA3-216ENST00000583282 NGRNQ9NPE2 291 aaKnown RBP15.04■□□□□ -0
GGA3-216ENST00000583282 CHST7Q9NS84 486 aa15.04■□□□□ -0
GGA3-216ENST00000583282 MYO7AQ13402 2215 aa15.03■□□□□ -0
GGA3-216ENST00000583282 PRRC2BQ5JSZ5 2229 aaKnown RBP15.03■□□□□ -0
GGA3-216ENST00000583282 PER2O15055 1255 aa15.03■□□□□ -0
GGA3-216ENST00000583282 STAU1O95793 577 aaKnown RBP15.03■□□□□ -0
GGA3-216ENST00000583282 CAVIN2O95810 425 aa15.03■□□□□ -0
GGA3-216ENST00000583282 OR4Q2P0C623 313 aa15.03■□□□□ -0
GGA3-216ENST00000583282 TYMPP19971 482 aa15.03■□□□□ -0
GGA3-216ENST00000583282 ACAT1P24752 427 aaKnown RBP15.03■□□□□ -0
GGA3-216ENST00000583282 GTF2F1P35269 517 aaKnown RBP eCLIP15.03■□□□□ -0
GGA3-216ENST00000583282 ASPAP45381 313 aa15.03■□□□□ -0
GGA3-216ENST00000583282 NRIP1P48552 1158 aa15.03■□□□□ -0
GGA3-216ENST00000583282 CDR1P51861 262 aa15.03■□□□□ -0
GGA3-216ENST00000583282 SGSM1Q2NKQ1 1148 aa15.03■□□□□ -0
GGA3-216ENST00000583282 WDR44Q5JSH3 913 aa15.03■□□□□ -0
GGA3-216ENST00000583282 KIAA0319Q5VV43 1072 aa15.03■□□□□ -0
GGA3-216ENST00000583282 ANKS3Q6ZW76 656 aa15.03■□□□□ -0
GGA3-216ENST00000583282 TOP6BLQ8N6T0 577 aa15.03■□□□□ -0
GGA3-216ENST00000583282 LNX1Q8TBB1 728 aaPredicted RBP15.03■□□□□ -0
GGA3-216ENST00000583282 PPM1EQ8WY54 764 aa15.03■□□□□ -0
GGA3-216ENST00000583282 MRPL45Q9BRJ2 306 aaKnown RBP15.03■□□□□ -0
GGA3-216ENST00000583282 SDCBP2Q9H190 292 aa15.03■□□□□ -0
GGA3-216ENST00000583282 GDAP2Q9NXN4 497 aa15.03■□□□□ -0
GGA3-216ENST00000583282 CHD7Q9P2D1 2997 aa15.03■□□□□ -0
GGA3-216ENST00000583282 MTRRQ9UBK8 725 aa15.03■□□□□ -0
GGA3-216ENST00000583282 DSEQ9UL01 958 aa15.03■□□□□ -0
GGA3-216ENST00000583282 CDY1Q9Y6F8 540 aa15.03■□□□□ -0
GGA3-216ENST00000583282 CHD9Q3L8U1 2897 aa15.03■□□□□ -0
GGA3-216ENST00000583282 P4HA2O15460 535 aa15.02■□□□□ -0
GGA3-216ENST00000583282 TEX28O15482 410 aa15.02■□□□□ -0
GGA3-216ENST00000583282 ADAM12O43184 909 aa15.02■□□□□ -0
GGA3-216ENST00000583282 CNPP09543 421 aaKnown RBP15.02■□□□□ -0
GGA3-216ENST00000583282 P4HA1P13674 534 aa15.02■□□□□ -0
GGA3-216ENST00000583282 CPB1P15086 417 aa15.02■□□□□ -0
GGA3-216ENST00000583282 CD58P19256 250 aa15.02■□□□□ -0
GGA3-216ENST00000583282 PAX3P23760 479 aa15.02■□□□□ -0
GGA3-216ENST00000583282 CDH8P55286 799 aa15.02■□□□□ -0
GGA3-216ENST00000583282 MCCD1P59942 119 aaPredicted RBP15.02■□□□□ -0
GGA3-216ENST00000583282 APBA1Q02410 837 aa15.02■□□□□ -0
GGA3-216ENST00000583282 CREMQ03060 361 aa15.02■□□□□ -0
GGA3-216ENST00000583282 CCDC85BQ15834 202 aaPredicted RBP15.02■□□□□ -0
GGA3-216ENST00000583282 SOWAHAQ2M3V2 549 aa15.02■□□□□ -0
GGA3-216ENST00000583282 PDE12Q6L8Q7 609 aaKnown RBP15.02■□□□□ -0
GGA3-216ENST00000583282 LLGL2Q6P1M3 1020 aa15.02■□□□□ -0
GGA3-216ENST00000583282 ARHGEF19Q8IW93 802 aa15.02■□□□□ -0
GGA3-216ENST00000583282 OR10T2Q8NGX3 314 aa15.02■□□□□ -0
GGA3-216ENST00000583282 KBTBD7Q8WVZ9 684 aa15.02■□□□□ -0
GGA3-216ENST00000583282 TAF4BQ92750 862 aa15.02■□□□□ -0
GGA3-216ENST00000583282 PPP2R3CQ969Q6 453 aa15.02■□□□□ -0
GGA3-216ENST00000583282 NT5C1BQ96P26 610 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms