RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 CCSAPQ6IQ19 270 aaPredicted RBP11.93□□□□□ -0.5
GGA3-213ENST00000582486 ALKAL1Q6UXT8 129 aa11.93□□□□□ -0.5
GGA3-213ENST00000582486 TFAP2BQ92481 460 aa11.93□□□□□ -0.5
GGA3-213ENST00000582486 FAXDC2Q96IV6 333 aa11.93□□□□□ -0.5
GGA3-213ENST00000582486 C11orf70Q9BRQ4 267 aa11.93□□□□□ -0.5
GGA3-213ENST00000582486 RNF39Q9H2S5 420 aa11.93□□□□□ -0.5
GGA3-213ENST00000582486 RBM12Q9NTZ6 932 aaKnown RBP11.93□□□□□ -0.5
GGA3-213ENST00000582486 M0QZ92 97 aa11.93□□□□□ -0.5
GGA3-213ENST00000582486 DDX3YO15523 660 aaKnown RBP11.93□□□□□ -0.5
GGA3-213ENST00000582486 HMGCRP04035 888 aa11.93□□□□□ -0.5
GGA3-213ENST00000582486 CTSHP09668 335 aa11.93□□□□□ -0.5
GGA3-213ENST00000582486 COMTP21964 271 aa11.93□□□□□ -0.5
GGA3-213ENST00000582486 PDE4CQ08493 712 aa11.93□□□□□ -0.5
GGA3-213ENST00000582486 ORC1Q13415 861 aa11.93□□□□□ -0.5
GGA3-213ENST00000582486 ZBTB6Q15916 424 aa11.93□□□□□ -0.5
GGA3-213ENST00000582486 MMGT1Q8N4V1 131 aa11.93□□□□□ -0.5
GGA3-213ENST00000582486 C18orf25Q96B23 403 aaPredicted RBP11.93□□□□□ -0.5
GGA3-213ENST00000582486 SELENOOQ9BVL4 669 aa11.93□□□□□ -0.5
GGA3-213ENST00000582486 ZNF446Q9NWS9 450 aa11.93□□□□□ -0.5
GGA3-213ENST00000582486 KLK14Q9P0G3 267 aa11.93□□□□□ -0.5
GGA3-213ENST00000582486 ADAM22Q9P0K1 906 aa11.93□□□□□ -0.5
GGA3-213ENST00000582486 TUBGCP4Q9UGJ1 667 aa11.93□□□□□ -0.5
GGA3-213ENST00000582486 HMGXB4Q9UGU5 601 aa11.93□□□□□ -0.5
GGA3-213ENST00000582486 RAB21Q9UL25 225 aa11.93□□□□□ -0.5
GGA3-213ENST00000582486 DERAQ9Y315 318 aa11.93□□□□□ -0.5
GGA3-213ENST00000582486 GRIN2DO15399 1336 aa11.93□□□□□ -0.5
GGA3-213ENST00000582486 PPEF2O14830 753 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 MYBL1P10243 752 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 P4HA1P13674 534 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 RAD23BP54727 409 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 VSNL1P62760 191 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 MMS22LQ6ZRQ5 1243 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 SERINC5Q86VE9 423 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 PHF13Q86YI8 300 aaPredicted RBP11.92□□□□□ -0.5
GGA3-213ENST00000582486 CPNE8Q86YQ8 564 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 USP38Q8NB14 1042 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 RAET1EQ8TD07 263 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 WHAMMQ8TF30 809 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 TRIM11Q96F44 468 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 TWNKQ96RR1 684 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 TRIM7Q9C029 511 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 AVENQ9NQS1 362 aaPredicted RBP11.92□□□□□ -0.5
GGA3-213ENST00000582486 CNTN3Q9P232 1028 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 PARP2Q9UGN5 583 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 TRPV2Q9Y5S1 764 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 CILPO75339 1184 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 CHRNA1P02708 482 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 CD19P15391 556 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 VEGFBP49765 207 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 MRPS25P82663 173 aaKnown RBP11.92□□□□□ -0.5
GGA3-213ENST00000582486 PTP4A2Q12974 167 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 MAP3K21Q5TCX8 1036 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 DCAF12L1Q5VU92 463 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 TWF2Q6IBS0 349 aaKnown RBP11.92□□□□□ -0.5
GGA3-213ENST00000582486 RSPH3Q86UC2 560 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 SMG8Q8ND04 991 aaKnown RBP11.92□□□□□ -0.5
GGA3-213ENST00000582486 C1orf131Q8NDD1 294 aaKnown RBP11.92□□□□□ -0.5
GGA3-213ENST00000582486 ACTRT1Q8TDG2 376 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 RPS6KC1Q96S38 1066 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 LRRC1Q9BTT6 524 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 CYP3A43Q9HB55 503 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 DDX20Q9UHI6 824 aaKnown RBP11.92□□□□□ -0.5
GGA3-213ENST00000582486 ANAPC7Q9UJX3 599 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 IPPQ9Y573 584 aa11.92□□□□□ -0.5
GGA3-213ENST00000582486 SMIM28A0A1B0GU29 152 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 RPS6KA5O75582 802 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 SEC31AO94979 1220 aaKnown RBP11.91□□□□□ -0.5
GGA3-213ENST00000582486 STAU1O95793 577 aaKnown RBP11.91□□□□□ -0.5
GGA3-213ENST00000582486 CST5P28325 142 aaPredicted RBP11.91□□□□□ -0.5
GGA3-213ENST00000582486 TNNC1P63316 161 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 HTRA3P83110 453 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 MYO1EQ12965 1108 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 NFX1Q12986 1120 aaKnown RBP11.91□□□□□ -0.5
GGA3-213ENST00000582486 TMCO3Q6UWJ1 677 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 RASGEF1CQ8N431 466 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 WDTC1Q8N5D0 677 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 SLC4A11Q8NBS3 891 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 BEST2Q8NFU1 509 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 ALG3Q92685 438 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 KRT35Q92764 455 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 VCPIP1Q96JH7 1222 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 HINFPQ9BQA5 517 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.91□□□□□ -0.59e-7■■■■□ 19.3
GGA3-213ENST00000582486 ELOVL4Q9GZR5 314 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 PCDHGC3Q9UN70 934 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 ST3GAL5Q9UNP4 418 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 SCN1AP35498 2009 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 CCDC151A5D8V7 595 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 ZMYND10O75800 440 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 PAEPP09466 180 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 MMP8P22894 467 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 MAP2K2P36507 400 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 MARCKSL1P49006 195 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 C1QBPQ07021 282 aaKnown RBP11.91□□□□□ -0.5
GGA3-213ENST00000582486 BRD3Q15059 726 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 PTGISQ16647 500 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 LIN9Q5TKA1 542 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 CC2D1AQ6P1N0 951 aaPredicted RBP11.91□□□□□ -0.5
GGA3-213ENST00000582486 SESTD1Q86VW0 696 aa11.91□□□□□ -0.5
GGA3-213ENST00000582486 PCSK9Q8NBP7 692 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms