RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 DCLK3Q9C098 648 aa11.36□□□□□ -0.59
CDK5RAP3-225ENST00000582482 C17orf75Q9HAS0 396 aa11.36□□□□□ -0.59
CDK5RAP3-225ENST00000582482 DNPEPQ9ULA0 475 aa11.36□□□□□ -0.59
CDK5RAP3-225ENST00000582482 STYXL1Q9Y6J8 313 aa11.36□□□□□ -0.59
CDK5RAP3-225ENST00000582482 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 FAM187AA6NFU0 413 aa11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 GPR25O00155 361 aa11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 ABLIM1O14639 778 aa11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 PMM2O15305 246 aa11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 GRAP2O75791 330 aa11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 IVDP26440 423 aa11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 ADCY8P40145 1251 aa11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 CLDN10P78369 228 aa11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 ZNF568Q3ZCX4 644 aa11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 EAPPQ56P03 285 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 RIOX2Q8IUF8 465 aa11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 TEX2Q8IWB9 1127 aa11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 SULF1Q8IWU6 871 aa11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 KIAA0319LQ8IZA0 1049 aa11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 SEPT1Q8WYJ6 367 aa11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 ART4Q93070 314 aa11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 LENG1Q96BZ8 264 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 OPTNQ96CV9 577 aa11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 THOC1Q96FV9 657 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 PIWIL1Q96J94 861 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 NAP1L3Q99457 506 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 PRMT1Q99873 361 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 NIFKQ9BYG3 293 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 DDX20Q9UHI6 824 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 FSCN2O14926 492 aa11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 PROSCO94903 275 aa11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 HOXC6P09630 235 aa11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 ICAM3P32942 547 aa11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 EFCAB12Q6NXP0 572 aa11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 ANKRD42Q8N9B4 389 aa11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 CHST13Q8NET6 341 aa11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 GDAP1Q8TB36 358 aa11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 RASSF4Q9H2L5 321 aa11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 PCSK1NQ9UHG2 260 aa11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 MTUS1Q9ULD2 1270 aa11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 MKI67P46013 3256 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-225ENST00000582482 MAFO75444 373 aaPredicted RBP11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 KRT1P04264 644 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 TXNP10599 105 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 EDNRBP24530 442 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 RTP1P59025 263 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 SH3D19Q5HYK7 790 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 NOL9Q5SY16 702 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 METTL7BQ6UX53 244 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 UBA3Q8TBC4 463 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 DCPSQ96C86 337 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 TMEM51Q9NW97 253 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 RASAL2Q9UJF2 1139 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 A0A087WZ62 844 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 RGS16O15492 202 aaPredicted RBP11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 YBX3P16989 372 aaKnown RBP eCLIP11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 IBSPP21815 317 aaPredicted RBP11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 IL1R2P27930 398 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 ASPAP45381 313 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 SNRPFP62306 86 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 MOGSQ13724 837 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 AUHQ13825 339 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 MPP2Q14168 576 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 CYP1B1Q16678 543 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 WDR72Q3MJ13 1102 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 PTPN20Q4JDL3 420 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 GSTA5Q7RTV2 222 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 BRSK2Q8IWQ3 736 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 ARFGAP1Q8N6T3 406 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 NETO2Q8NC67 525 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 DNERQ8NFT8 737 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 TLCD1Q96CP7 247 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 CDCA5Q96FF9 252 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 FDXACB1Q9BRP7 624 aaPredicted RBP11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 TMEM121Q9BTD3 319 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 OSBPL8Q9BZF1 889 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 KIF9Q9HAQ2 790 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 NRBP2Q9NSY0 501 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 SIX4Q9UIU6 781 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 DIS3Q9Y2L1 958 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 PASKQ96RG2 1323 aa11.34□□□□□ -0.59
CDK5RAP3-225ENST00000582482 ASS1P00966 412 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 RFC1P35251 1148 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 GDF10P55107 478 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 KLF1Q13351 362 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 MTMR3Q13615 1198 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ZNF699Q32M78 642 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 CELF3Q5SZQ8 465 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 TAX1BP1Q86VP1 789 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 SLC17A8Q8NDX2 589 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 MMP19Q99542 508 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 MAGEB5Q9BZ81 275 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 XYLT2Q9H1B5 865 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 LRRC19Q9H756 370 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 HES2Q9Y543 173 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 SIP14410 1827 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 LRRD1A4D1F6 860 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 GMNCA6NCL1 334 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 PPEF2O14830 753 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms