RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 ELF1P32519 619 aa11.22□□□□□ -0.61
TOP3A-212ENST00000582122 MTHFRP42898 656 aa11.22□□□□□ -0.61
TOP3A-212ENST00000582122 VAMP7P51809 220 aa11.22□□□□□ -0.61
TOP3A-212ENST00000582122 MCCD1P59942 119 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-212ENST00000582122 BFSP1Q12934 665 aa11.22□□□□□ -0.61
TOP3A-212ENST00000582122 PAK1Q13153 545 aa11.22□□□□□ -0.61
TOP3A-212ENST00000582122 CAMK4Q16566 473 aa11.22□□□□□ -0.61
TOP3A-212ENST00000582122 LIN9Q5TKA1 542 aa11.22□□□□□ -0.61
TOP3A-212ENST00000582122 OVOS1Q6IE37 1185 aa11.22□□□□□ -0.61
TOP3A-212ENST00000582122 C15orf39Q6ZRI6 1047 aa11.22□□□□□ -0.61
TOP3A-212ENST00000582122 TRAPPC11Q7Z392 1133 aa11.22□□□□□ -0.61
TOP3A-212ENST00000582122 TOP6BLQ8N6T0 577 aa11.22□□□□□ -0.61
TOP3A-212ENST00000582122 SMRP1Q8NCR6 262 aa11.22□□□□□ -0.61
TOP3A-212ENST00000582122 CCDC150Q8NCX0 1101 aa11.22□□□□□ -0.61
TOP3A-212ENST00000582122 ZSWIM2Q8NEG5 633 aa11.22□□□□□ -0.61
TOP3A-212ENST00000582122 ZNF461Q8TAF7 563 aa11.22□□□□□ -0.61
TOP3A-212ENST00000582122 HPDLQ96IR7 371 aa11.22□□□□□ -0.61
TOP3A-212ENST00000582122 FAXDC2Q96IV6 333 aa11.22□□□□□ -0.61
TOP3A-212ENST00000582122 MSLNLQ96KJ4 702 aa11.22□□□□□ -0.61
TOP3A-212ENST00000582122 POP1Q99575 1024 aaKnown RBP11.22□□□□□ -0.61
TOP3A-212ENST00000582122 IMPG2Q9BZV3 1241 aa11.22□□□□□ -0.61
TOP3A-212ENST00000582122 PRKAG3Q9UGI9 489 aa11.22□□□□□ -0.61
TOP3A-212ENST00000582122 ANK1P16157 1881 aa11.21□□□□□ -0.61
TOP3A-212ENST00000582122 PRR33A8MZF0 331 aa11.21□□□□□ -0.61
TOP3A-212ENST00000582122 PI4K2BG5E9Z4 385 aa11.21□□□□□ -0.61
TOP3A-212ENST00000582122 TBC1D4O60343 1298 aa11.21□□□□□ -0.61
TOP3A-212ENST00000582122 TBX10O75333 385 aa11.21□□□□□ -0.61
TOP3A-212ENST00000582122 GLP2RO95838 553 aa11.21□□□□□ -0.61
TOP3A-212ENST00000582122 POU2F2P09086 479 aa11.21□□□□□ -0.61
TOP3A-212ENST00000582122 TRIM21P19474 475 aaKnown RBP11.21□□□□□ -0.61
TOP3A-212ENST00000582122 PCSK1P29120 753 aa11.21□□□□□ -0.61
TOP3A-212ENST00000582122 OR1D2P34982 312 aa11.21□□□□□ -0.61
TOP3A-212ENST00000582122 GTF2F1P35269 517 aaKnown RBP eCLIP11.21□□□□□ -0.61
TOP3A-212ENST00000582122 LTBRP36941 435 aa11.21□□□□□ -0.61
TOP3A-212ENST00000582122 LHX1P48742 406 aa11.21□□□□□ -0.61
TOP3A-212ENST00000582122 GUCY2FP51841 1108 aa11.21□□□□□ -0.61
TOP3A-212ENST00000582122 BIRC3Q13489 604 aa11.21□□□□□ -0.61
TOP3A-212ENST00000582122 ATAT1Q5SQI0 421 aa11.21□□□□□ -0.61
TOP3A-212ENST00000582122 PTCRAQ6ISU1 281 aaPredicted RBP11.21□□□□□ -0.61
TOP3A-212ENST00000582122 LLGL2Q6P1M3 1020 aa11.21□□□□□ -0.61
TOP3A-212ENST00000582122 LILRA6Q6PI73 481 aa11.21□□□□□ -0.61
TOP3A-212ENST00000582122 PRSS55Q6UWB4 352 aaPredicted RBP11.21□□□□□ -0.61
TOP3A-212ENST00000582122 FILIP1Q7Z7B0 1213 aa11.21□□□□□ -0.61
TOP3A-212ENST00000582122 ZC3H3Q8IXZ2 948 aaKnown RBP11.21□□□□□ -0.61
TOP3A-212ENST00000582122 SMYD4Q8IYR2 804 aaPredicted RBP11.21□□□□□ -0.61
TOP3A-212ENST00000582122 KREMEN2Q8NCW0 462 aa11.21□□□□□ -0.61
TOP3A-212ENST00000582122 C2orf15Q8WU43 125 aaKnown RBP11.21□□□□□ -0.61
TOP3A-212ENST00000582122 B3GALT6Q96L58 329 aa11.21□□□□□ -0.61
TOP3A-212ENST00000582122 CLSTN3Q9BQT9 956 aa11.21□□□□□ -0.61
TOP3A-212ENST00000582122 ADAM7Q9H2U9 754 aa11.21□□□□□ -0.61
TOP3A-212ENST00000582122 VRTNQ9H8Y1 702 aa11.21□□□□□ -0.61
TOP3A-212ENST00000582122 C11orf16Q9NQ32 467 aa11.21□□□□□ -0.61
TOP3A-212ENST00000582122 CLEC1BQ9P126 229 aa11.21□□□□□ -0.61
TOP3A-212ENST00000582122 HSFX1Q9UBD0 423 aa11.21□□□□□ -0.61
TOP3A-212ENST00000582122 ARMCX3Q9UH62 379 aaPredicted RBP11.21□□□□□ -0.61
TOP3A-212ENST00000582122 CDY1Q9Y6F8 540 aa11.21□□□□□ -0.61
TOP3A-212ENST00000582122 FAM86C2PA6NEL3 165 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 GRXCR2A6NFK2 248 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 LRRIQ3A6PVS8 624 aaPredicted RBP11.2□□□□□ -0.62
TOP3A-212ENST00000582122 PPP1R3GB7ZBB8 358 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 H3BQ06 376 aaPredicted RBP11.2□□□□□ -0.62
TOP3A-212ENST00000582122 I3L4J1 428 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 BIN1O00499 593 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 LINC01565O15544 149 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 TGM5O43548 720 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 N4BP1O75113 896 aaKnown RBP11.2□□□□□ -0.62
TOP3A-212ENST00000582122 XYLBO75191 536 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 AKAP3O75969 853 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 PAPLNO95428 1278 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 ATF2P15336 505 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 EPCAMP16422 314 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 CASP4P49662 377 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 TNNC1P63316 161 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 MYL7Q01449 175 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 TSPY1Q01534 308 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 CETN1Q12798 172 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 SMAD2Q15796 467 aaKnown RBP11.2□□□□□ -0.62
TOP3A-212ENST00000582122 SGSM1Q2NKQ1 1148 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 ZACNQ401N2 412 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 ANKRD40Q6AI12 368 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 FRMD5Q7Z6J6 570 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 PALB2Q86YC2 1186 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 DCP1BQ8IZD4 617 aaKnown RBP11.2□□□□□ -0.62
TOP3A-212ENST00000582122 VN1R2Q8NFZ6 395 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 OR5B17Q8NGF7 314 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 NELFBQ8WX92 580 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 ERCC4Q92889 916 aaPredicted RBP11.2□□□□□ -0.62
TOP3A-212ENST00000582122 FAM124BQ9H5Z6 455 aaPredicted RBP11.2□□□□□ -0.62
TOP3A-212ENST00000582122 MAN1C1Q9NR34 630 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 AFF4Q9UHB7 1163 aaKnown RBP11.2□□□□□ -0.62
TOP3A-212ENST00000582122 SIX4Q9UIU6 781 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 RWDD2AQ9UIY3 292 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 FBXL5Q9UKA1 691 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 FBXW11Q9UKB1 542 aa11.2□□□□□ -0.62
TOP3A-212ENST00000582122 BARX2Q9UMQ3 279 aaPredicted RBP11.2□□□□□ -0.62
TOP3A-212ENST00000582122 ATG2AQ2TAZ0 1938 aa11.19□□□□□ -0.62
TOP3A-212ENST00000582122 MBTPS2O43462 519 aa11.19□□□□□ -0.62
TOP3A-212ENST00000582122 ZMYND10O75800 440 aa11.19□□□□□ -0.62
TOP3A-212ENST00000582122 ABLIM3O94929 683 aa11.19□□□□□ -0.62
TOP3A-212ENST00000582122 C4BPAP04003 597 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms