RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 UBL4BQ8N7F7 174 aa7.94□□□□□ -1.14
TVP23C-208ENST00000581273 MIGA1Q8NAN2 632 aa7.94□□□□□ -1.14
TVP23C-208ENST00000581273 TRPV1Q8NER1 839 aa7.94□□□□□ -1.14
TVP23C-208ENST00000581273 TPCN2Q8NHX9 752 aa7.94□□□□□ -1.14
TVP23C-208ENST00000581273 NPLOC4Q8TAT6 608 aa7.94□□□□□ -1.14
TVP23C-208ENST00000581273 ACER1Q8TDN7 264 aa7.94□□□□□ -1.14
TVP23C-208ENST00000581273 GTF3C2Q8WUA4 911 aaPredicted RBP7.94□□□□□ -1.14
TVP23C-208ENST00000581273 LPAR1Q92633 364 aa7.94□□□□□ -1.14
TVP23C-208ENST00000581273 FAM136AQ96C01 138 aa7.94□□□□□ -1.14
TVP23C-208ENST00000581273 BORCS6Q96GS4 357 aa7.94□□□□□ -1.14
TVP23C-208ENST00000581273 HIC2Q96JB3 615 aa7.94□□□□□ -1.14
TVP23C-208ENST00000581273 HAPLN3Q96S86 360 aa7.94□□□□□ -1.14
TVP23C-208ENST00000581273 ZSCAN10Q96SZ4 725 aaPredicted RBP7.94□□□□□ -1.14
TVP23C-208ENST00000581273 LZTS2Q9BRK4 669 aa7.94□□□□□ -1.14
TVP23C-208ENST00000581273 LSM14BQ9BX40 385 aaKnown RBP7.94□□□□□ -1.14
TVP23C-208ENST00000581273 PITPNM3Q9BZ71 974 aa7.94□□□□□ -1.14
TVP23C-208ENST00000581273 DDX47Q9H0S4 455 aaKnown RBP7.94□□□□□ -1.14
TVP23C-208ENST00000581273 EPB41L1Q9H4G0 881 aa7.94□□□□□ -1.14
TVP23C-208ENST00000581273 SYNCQ9H7C4 482 aa7.94□□□□□ -1.14
TVP23C-208ENST00000581273 TLE6Q9H808 572 aa7.94□□□□□ -1.14
TVP23C-208ENST00000581273 DNAAF2Q9NVR5 837 aaKnown RBP7.94□□□□□ -1.14
TVP23C-208ENST00000581273 BTBD7Q9P203 1132 aa7.94□□□□□ -1.14
TVP23C-208ENST00000581273 SEC63Q9UGP8 760 aaKnown RBP7.94□□□□□ -1.14
TVP23C-208ENST00000581273 PCDHA4Q9UN74 947 aa7.94□□□□□ -1.14
TVP23C-208ENST00000581273 V9GY48 417 aaPredicted RBP7.94□□□□□ -1.14
TVP23C-208ENST00000581273 CHD6Q8TD26 2715 aa7.94□□□□□ -1.14
TVP23C-208ENST00000581273 FASNP49327 2511 aaKnown RBP7.93□□□□□ -1.14
TVP23C-208ENST00000581273 UNC79Q9P2D8 2635 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 KBTBD13C9JR72 458 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 MAGEB2O15479 319 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 TTI1O43156 1089 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 PHF2O75151 1096 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 FAM200BP0CF97 657 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 VCAM1P19320 739 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 RFC5P40937 340 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 ADCYAP1R1P41586 468 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 KLK7P49862 253 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 PPP4CP60510 307 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 MAPK7Q13164 816 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 LSAMPQ13449 338 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 RCN2Q14257 317 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 SEC23AQ15436 765 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 TMEM266Q2M3C6 531 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 ABCB5Q2M3G0 1257 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 TRIM60Q495X7 471 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 CERKLQ49MI3 558 aaPredicted RBP7.93□□□□□ -1.14
TVP23C-208ENST00000581273 PABPC1LQ4VXU2 614 aaKnown RBP7.93□□□□□ -1.14
TVP23C-208ENST00000581273 CCDC92Q53HC0 331 aaPredicted RBP7.93□□□□□ -1.14
TVP23C-208ENST00000581273 SLC45A4Q5BKX6 768 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 SLC39A5Q6ZMH5 540 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 CATSPERGQ6ZRH7 1159 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 HFE2Q6ZVN8 426 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 LONP2Q86WA8 852 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 CCDC65Q8IXS2 484 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 LRRC57Q8N9N7 239 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 ARRDC4Q8NCT1 418 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 RSPH1Q8WYR4 309 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 PRCCQ92733 491 aaPredicted RBP7.93□□□□□ -1.14
TVP23C-208ENST00000581273 ARHGEF2Q92974 986 aaKnown RBP7.93□□□□□ -1.14
TVP23C-208ENST00000581273 HES6Q96HZ4 224 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 CDK5RAP3Q96JB5 506 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 TGS1Q96RS0 853 aaKnown RBP7.93□□□□□ -1.14
TVP23C-208ENST00000581273 SYT15Q9BQS2 421 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 DDX23Q9BUQ8 820 aaKnown RBP7.93□□□□□ -1.14
TVP23C-208ENST00000581273 PBX4Q9BYU1 374 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 CCDC113Q9H0I3 377 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 DPH5Q9H2P9 285 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 ADAM7Q9H2U9 754 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 RPAP3Q9H6T3 665 aaPredicted RBP7.93□□□□□ -1.14
TVP23C-208ENST00000581273 POLD4Q9HCU8 107 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 PIH1D3Q9NQM4 214 aaKnown RBP7.93□□□□□ -1.14
TVP23C-208ENST00000581273 GINM1Q9NU53 330 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 ZDHHC18Q9NUE0 388 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 FGFR1OP2Q9NVK5 253 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 TBCCD1Q9NVR7 557 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 DDX43Q9NXZ2 648 aaKnown RBP7.93□□□□□ -1.14
TVP23C-208ENST00000581273 PCYOX1Q9UHG3 505 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 AMACRQ9UHK6 382 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 SALL4Q9UJQ4 1053 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 SMG5Q9UPR3 1016 aaKnown RBP7.93□□□□□ -1.14
TVP23C-208ENST00000581273 TNKSO95271 1327 aa7.93□□□□□ -1.14
TVP23C-208ENST00000581273 RIF1Q5UIP0 2472 aaKnown RBP7.93□□□□□ -1.14
TVP23C-208ENST00000581273 FAM186AA6NE01 2351 aa7.92□□□□□ -1.14
TVP23C-208ENST00000581273 TRANK1O15050 2925 aa7.92□□□□□ -1.14
TVP23C-208ENST00000581273 TMEM120BA0PK00 339 aa7.92□□□□□ -1.14
TVP23C-208ENST00000581273 TRIM43BA6NCK2 446 aa7.92□□□□□ -1.14
TVP23C-208ENST00000581273 F8W8V4 182 aa7.92□□□□□ -1.14
TVP23C-208ENST00000581273 SMAPO00193 183 aa7.92□□□□□ -1.14
TVP23C-208ENST00000581273 BACH1O14867 736 aa7.92□□□□□ -1.14
TVP23C-208ENST00000581273 RIPK2O43353 540 aa7.92□□□□□ -1.14
TVP23C-208ENST00000581273 ATP9BO43861 1147 aa7.92□□□□□ -1.14
TVP23C-208ENST00000581273 MSCO60682 206 aa7.92□□□□□ -1.14
TVP23C-208ENST00000581273 ATP9AO75110 1047 aa7.92□□□□□ -1.14
TVP23C-208ENST00000581273 COBLO75128 1261 aa7.92□□□□□ -1.14
TVP23C-208ENST00000581273 MBD4O95243 580 aa7.92□□□□□ -1.14
TVP23C-208ENST00000581273 AFPP02771 609 aaKnown RBP7.92□□□□□ -1.14
TVP23C-208ENST00000581273 ATP5BP06576 529 aaKnown RBP7.92□□□□□ -1.14
TVP23C-208ENST00000581273 OR52Z1P0C646 297 aa7.92□□□□□ -1.14
TVP23C-208ENST00000581273 TROVE2P10155 538 aaKnown RBP eCLIP7.92□□□□□ -1.14
TVP23C-208ENST00000581273 ADORA2AP29274 412 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms