RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 ATF2P15336 505 aa11.75□□□□□ -0.53
NDEL1-208ENST00000580237 TNNI1P19237 187 aa11.75□□□□□ -0.53
NDEL1-208ENST00000580237 HOXD13P35453 343 aa11.75□□□□□ -0.53
NDEL1-208ENST00000580237 ADCY1Q08828 1119 aa11.75□□□□□ -0.53
NDEL1-208ENST00000580237 MYO1EQ12965 1108 aa11.75□□□□□ -0.53
NDEL1-208ENST00000580237 STK4Q13043 487 aa11.75□□□□□ -0.53
NDEL1-208ENST00000580237 MRPL58Q14197 206 aaKnown RBP11.75□□□□□ -0.53
NDEL1-208ENST00000580237 UVSSAQ2YD98 709 aa11.75□□□□□ -0.53
NDEL1-208ENST00000580237 PABPC1LQ4VXU2 614 aaKnown RBP11.75□□□□□ -0.53
NDEL1-208ENST00000580237 RTL10Q7L3V2 364 aa11.75□□□□□ -0.53
NDEL1-208ENST00000580237 WDR49Q8IV35 697 aa11.75□□□□□ -0.53
NDEL1-208ENST00000580237 ZDHHC14Q8IZN3 488 aa11.75□□□□□ -0.53
NDEL1-208ENST00000580237 THEM5Q8N1Q8 247 aa11.75□□□□□ -0.53
NDEL1-208ENST00000580237 CSGALNACT2Q8N6G5 542 aa11.75□□□□□ -0.53
NDEL1-208ENST00000580237 C1orf127Q8N9H9 656 aa11.75□□□□□ -0.53
NDEL1-208ENST00000580237 CCDC127Q96BQ5 260 aa11.75□□□□□ -0.53
NDEL1-208ENST00000580237 FAM84AQ96KN4 292 aa11.75□□□□□ -0.53
NDEL1-208ENST00000580237 PGLYRP2Q96PD5 576 aa11.75□□□□□ -0.53
NDEL1-208ENST00000580237 LIMD1Q9UGP4 676 aa11.75□□□□□ -0.53
NDEL1-208ENST00000580237 AFF4Q9UHB7 1163 aaKnown RBP11.75□□□□□ -0.53
NDEL1-208ENST00000580237 HOOK1Q9UJC3 728 aaKnown RBP11.75□□□□□ -0.53
NDEL1-208ENST00000580237 CIZ1Q9ULV3 898 aaPredicted RBP11.75□□□□□ -0.53
NDEL1-208ENST00000580237 SORCS3Q9UPU3 1222 aa11.75□□□□□ -0.53
NDEL1-208ENST00000580237 ZNF638Q14966 1978 aaKnown RBP11.75□□□□□ -0.53
NDEL1-208ENST00000580237 NOTCH4Q99466 2003 aa11.75□□□□□ -0.53
NDEL1-208ENST00000580237 TGFB1I1O43294 461 aa11.74□□□□□ -0.53
NDEL1-208ENST00000580237 HUS1O60921 280 aa11.74□□□□□ -0.53
NDEL1-208ENST00000580237 PRPF40AO75400 957 aaKnown RBP11.74□□□□□ -0.53
NDEL1-208ENST00000580237 OAZ2O95190 189 aa11.74□□□□□ -0.53
NDEL1-208ENST00000580237 NTHL1P78549 312 aa11.74□□□□□ -0.53
NDEL1-208ENST00000580237 RBP5P82980 135 aa11.74□□□□□ -0.53
NDEL1-208ENST00000580237 FAM160A1Q05DH4 1040 aa11.74□□□□□ -0.53
NDEL1-208ENST00000580237 DPYDQ12882 1025 aa11.74□□□□□ -0.53
NDEL1-208ENST00000580237 PLD1Q13393 1074 aa11.74□□□□□ -0.53
NDEL1-208ENST00000580237 DUOXA2Q1HG44 320 aa11.74□□□□□ -0.53
NDEL1-208ENST00000580237 IQCEQ6IPM2 695 aa11.74□□□□□ -0.53
NDEL1-208ENST00000580237 RNF19BQ6ZMZ0 732 aa11.74□□□□□ -0.53
NDEL1-208ENST00000580237 LRRC52Q8N7C0 313 aa11.74□□□□□ -0.53
NDEL1-208ENST00000580237 EDAQ92838 391 aa11.74□□□□□ -0.53
NDEL1-208ENST00000580237 CGRRF1Q99675 332 aa11.74□□□□□ -0.53
NDEL1-208ENST00000580237 INTS13Q9NVM9 706 aa11.74□□□□□ -0.53
NDEL1-208ENST00000580237 RMND1Q9NWS8 449 aa11.74□□□□□ -0.53
NDEL1-208ENST00000580237 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.74□□□□□ -0.53
NDEL1-208ENST00000580237 YIPF1Q9Y548 306 aa11.74□□□□□ -0.53
NDEL1-208ENST00000580237 MYH10P35580 1976 aa11.74□□□□□ -0.53
NDEL1-208ENST00000580237 PRR33A8MZF0 331 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 CALUO43852 315 aaPredicted RBP11.73□□□□□ -0.53
NDEL1-208ENST00000580237 TBC1D4O60343 1298 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 KINO60870 393 aaKnown RBP11.73□□□□□ -0.53
NDEL1-208ENST00000580237 GPR37L1O60883 481 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 PHACTR2O75167 634 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 ABLIM3O94929 683 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 RHOBTB3O94955 611 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 NR3C1P04150 777 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 POU2F2P09086 479 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 ZXDAP98168 799 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 TSPY1Q01534 308 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 CYP24A1Q07973 514 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 TWF1Q12792 350 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 PTPRJQ12913 1337 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 BIRC3Q13489 604 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 PNOCQ13519 176 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 MYBPC2Q14324 1141 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 PSMD6Q15008 389 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 WSCD1Q658N2 575 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 CEP135Q66GS9 1140 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 C12orf56Q8IXR9 622 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 TCEAL8Q8IYN2 117 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 OR5B17Q8NGF7 314 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 ING5Q8WYH8 240 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 MYADMQ96S97 322 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 SEPT5Q99719 369 aaPredicted RBP11.73□□□□□ -0.53
NDEL1-208ENST00000580237 CORO1BQ9BR76 489 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 LRFN3Q9BTN0 628 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 HCFC1R1Q9NWW0 138 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 MAFFQ9ULX9 164 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 MAPK8IP1Q9UQF2 711 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 MRPS23Q9Y3D9 190 aaKnown RBP11.73□□□□□ -0.53
NDEL1-208ENST00000580237 HCN4Q9Y3Q4 1203 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 SNX9Q9Y5X1 595 aa11.73□□□□□ -0.53
NDEL1-208ENST00000580237 MTMR11A4FU01 709 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 PDXKO00764 312 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 SMC2O95347 1197 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 PAPLNO95428 1278 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 SEC24AO95486 1093 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 CYP11A1P05108 521 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 RHOP08100 348 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 ALDH1A3P47895 512 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 EPHB3P54753 998 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 MYL7Q01449 175 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 SIGLEC14Q08ET2 396 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 GPR17Q13304 367 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 TRPC3Q13507 836 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 KCNB1Q14721 858 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 VEPH1Q14D04 833 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 SLC39A12Q504Y0 691 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 CYP4A22Q5TCH4 519 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 TRIM67Q6ZTA4 783 aa11.72□□□□□ -0.53
NDEL1-208ENST00000580237 PDZD4Q76G19 769 aaPredicted RBP11.72□□□□□ -0.53
NDEL1-208ENST00000580237 UBALD2Q8IYN6 164 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms