RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 ZNF75DP51815 510 aa13.01□□□□□ -0.33
IFT20-207ENST00000578547 KRT17Q04695 432 aa13.01□□□□□ -0.33
IFT20-207ENST00000578547 GSE1Q14687 1217 aa13.01□□□□□ -0.33
IFT20-207ENST00000578547 RRAGAQ7L523 313 aa13.01□□□□□ -0.33
IFT20-207ENST00000578547 APPL2Q8NEU8 664 aa13.01□□□□□ -0.33
IFT20-207ENST00000578547 NEK11Q8NG66 645 aa13.01□□□□□ -0.33
IFT20-207ENST00000578547 SUSD3Q96L08 255 aa13.01□□□□□ -0.33
IFT20-207ENST00000578547 ERGIC2Q96RQ1 377 aa13.01□□□□□ -0.33
IFT20-207ENST00000578547 VN1R3Q9BXE9 311 aa13.01□□□□□ -0.33
IFT20-207ENST00000578547 VRTNQ9H8Y1 702 aa13.01□□□□□ -0.33
IFT20-207ENST00000578547 SIX2Q9NPC8 291 aa13.01□□□□□ -0.33
IFT20-207ENST00000578547 APEX2Q9UBZ4 518 aa13.01□□□□□ -0.33
IFT20-207ENST00000578547 PCDHB8Q9UN66 801 aa13.01□□□□□ -0.33
IFT20-207ENST00000578547 L1RE1Q9UN81 338 aa13.01□□□□□ -0.33
IFT20-207ENST00000578547 TSC2P49815 1807 aa13□□□□□ -0.33
IFT20-207ENST00000578547 TMEM265A0A087WTH1 108 aa13□□□□□ -0.33
IFT20-207ENST00000578547 A0A1W2PQC6 194 aa13□□□□□ -0.33
IFT20-207ENST00000578547 H3BNC9 293 aa13□□□□□ -0.33
IFT20-207ENST00000578547 M0QZQ0 153 aa13□□□□□ -0.33
IFT20-207ENST00000578547 GRM6O15303 877 aa13□□□□□ -0.33
IFT20-207ENST00000578547 EFEMP2O95967 443 aa13□□□□□ -0.33
IFT20-207ENST00000578547 WEE2P0C1S8 567 aa13□□□□□ -0.33
IFT20-207ENST00000578547 CD58P19256 250 aa13□□□□□ -0.33
IFT20-207ENST00000578547 TKTP29401 623 aaKnown RBP13□□□□□ -0.33
IFT20-207ENST00000578547 CA8P35219 290 aa13□□□□□ -0.33
IFT20-207ENST00000578547 AARSP49588 968 aaKnown RBP eCLIP13□□□□□ -0.33
IFT20-207ENST00000578547 CDH8P55286 799 aa13□□□□□ -0.33
IFT20-207ENST00000578547 PLCB3Q01970 1234 aa13□□□□□ -0.33
IFT20-207ENST00000578547 ELAVL2Q12926 359 aaKnown RBP13□□□□□ -0.33
IFT20-207ENST00000578547 GPM6BQ13491 265 aa13□□□□□ -0.33
IFT20-207ENST00000578547 CUL2Q13617 745 aa13□□□□□ -0.33
IFT20-207ENST00000578547 RAPGEF1Q13905 1077 aa13□□□□□ -0.33
IFT20-207ENST00000578547 SOWAHAQ2M3V2 549 aa13□□□□□ -0.33
IFT20-207ENST00000578547 KLHDC7AQ5VTJ3 777 aa13□□□□□ -0.33
IFT20-207ENST00000578547 WSCD1Q658N2 575 aa13□□□□□ -0.33
IFT20-207ENST00000578547 KIAA1841Q6NSI8 718 aa13□□□□□ -0.33
IFT20-207ENST00000578547 PHLDB3Q6NSJ2 640 aa13□□□□□ -0.33
IFT20-207ENST00000578547 TAS1R1Q7RTX1 841 aa13□□□□□ -0.33
IFT20-207ENST00000578547 METTL23Q86XA0 190 aa13□□□□□ -0.33
IFT20-207ENST00000578547 ADGRF2Q8IZF7 708 aa13□□□□□ -0.33
IFT20-207ENST00000578547 PDCL2Q8N4E4 241 aa13□□□□□ -0.33
IFT20-207ENST00000578547 SPPL3Q8TCT6 385 aa13□□□□□ -0.33
IFT20-207ENST00000578547 KAT5Q92993 513 aa13□□□□□ -0.33
IFT20-207ENST00000578547 C11orf84Q9BUA3 381 aaPredicted RBP13□□□□□ -0.33
IFT20-207ENST00000578547 SDCBP2Q9H190 292 aa13□□□□□ -0.33
IFT20-207ENST00000578547 UBE2TQ9NPD8 197 aaPredicted RBP13□□□□□ -0.33
IFT20-207ENST00000578547 GDAP2Q9NXN4 497 aa13□□□□□ -0.33
IFT20-207ENST00000578547 AJAP1Q9UKB5 411 aaPredicted RBP13□□□□□ -0.33
IFT20-207ENST00000578547 FHOD1Q9Y613 1164 aa13□□□□□ -0.33
IFT20-207ENST00000578547 PLXNA4Q9HCM2 1894 aa12.99□□□□□ -0.33
IFT20-207ENST00000578547 ARHGEF37A1IGU5 675 aa12.99□□□□□ -0.33
IFT20-207ENST00000578547 C2CD2LO14523 706 aa12.99□□□□□ -0.33
IFT20-207ENST00000578547 EPHB6O15197 1021 aa12.99□□□□□ -0.33
IFT20-207ENST00000578547 SOD2P04179 222 aa12.99□□□□□ -0.33
IFT20-207ENST00000578547 TRIM21P19474 475 aaKnown RBP12.99□□□□□ -0.33
IFT20-207ENST00000578547 PAX3P23760 479 aa12.99□□□□□ -0.33
IFT20-207ENST00000578547 TBXAS1P24557 533 aaPredicted RBP12.99□□□□□ -0.33
IFT20-207ENST00000578547 DNAJB1P25685 340 aa12.99□□□□□ -0.33
IFT20-207ENST00000578547 PBX1P40424 430 aa12.99□□□□□ -0.33
IFT20-207ENST00000578547 GLUD2P49448 558 aa12.99□□□□□ -0.33
IFT20-207ENST00000578547 FXR1P51114 621 aaKnown RBP eCLIP12.99□□□□□ -0.33
IFT20-207ENST00000578547 MFAP3P55082 362 aa12.99□□□□□ -0.33
IFT20-207ENST00000578547 POLR2FP61218 127 aaKnown RBP12.99□□□□□ -0.33
IFT20-207ENST00000578547 GRIN2CQ14957 1233 aa12.99□□□□□ -0.33
IFT20-207ENST00000578547 ARHGAP44Q17R89 818 aa12.99□□□□□ -0.33
IFT20-207ENST00000578547 ZNF697Q5TEC3 545 aa12.99□□□□□ -0.33
IFT20-207ENST00000578547 OVOS1Q6IE37 1185 aa12.99□□□□□ -0.33
IFT20-207ENST00000578547 IQCEQ6IPM2 695 aa12.99□□□□□ -0.33
IFT20-207ENST00000578547 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.99□□□□□ -0.33
IFT20-207ENST00000578547 Q7L0L9 218 aa12.99□□□□□ -0.33
IFT20-207ENST00000578547 DDX53Q86TM3 631 aaKnown RBP12.99□□□□□ -0.33
IFT20-207ENST00000578547 VPS52Q8N1B4 723 aa12.99□□□□□ -0.33
IFT20-207ENST00000578547 TOP6BLQ8N6T0 577 aa12.99□□□□□ -0.33
IFT20-207ENST00000578547 GDPD5Q8WTR4 605 aa12.99□□□□□ -0.33
IFT20-207ENST00000578547 FAM161BQ96MY7 647 aa12.99□□□□□ -0.33
IFT20-207ENST00000578547 MRPL45Q9BRJ2 306 aaKnown RBP12.99□□□□□ -0.33
IFT20-207ENST00000578547 HERC2P3Q9BVR0 1158 aa12.99□□□□□ -0.33
IFT20-207ENST00000578547 GANQ9H2C0 597 aa12.99□□□□□ -0.33
IFT20-207ENST00000578547 SNX25Q9H3E2 840 aa12.99□□□□□ -0.33
IFT20-207ENST00000578547 PRDM12Q9H4Q4 367 aa12.99□□□□□ -0.33
IFT20-207ENST00000578547 NLRC4Q9NPP4 1024 aa12.99□□□□□ -0.33
IFT20-207ENST00000578547 PLCB1Q9NQ66 1216 aa12.99□□□□□ -0.33
IFT20-207ENST00000578547 PUF60Q9UHX1 559 aaKnown RBP12.99□□□□□ -0.33
IFT20-207ENST00000578547 DNAJC12Q9UKB3 198 aa12.99□□□□□ -0.33
IFT20-207ENST00000578547 SYN3O14994 580 aa12.98□□□□□ -0.33
IFT20-207ENST00000578547 HCRTO43612 131 aa12.98□□□□□ -0.33
IFT20-207ENST00000578547 LPXNO60711 386 aa12.98□□□□□ -0.33
IFT20-207ENST00000578547 NOL4O94818 638 aa12.98□□□□□ -0.33
IFT20-207ENST00000578547 ADCY5O95622 1261 aa12.98□□□□□ -0.33
IFT20-207ENST00000578547 URODP06132 367 aa12.98□□□□□ -0.33
IFT20-207ENST00000578547 UCHL3P15374 230 aa12.98□□□□□ -0.33
IFT20-207ENST00000578547 TYMPP19971 482 aa12.98□□□□□ -0.33
IFT20-207ENST00000578547 USP8P40818 1118 aa12.98□□□□□ -0.33
IFT20-207ENST00000578547 MRE11P49959 708 aa12.98□□□□□ -0.33
IFT20-207ENST00000578547 GCNT1Q02742 428 aa12.98□□□□□ -0.33
IFT20-207ENST00000578547 YWHAHQ04917 246 aaPredicted RBP12.98□□□□□ -0.33
IFT20-207ENST00000578547 CAMK1Q14012 370 aa12.98□□□□□ -0.33
IFT20-207ENST00000578547 USP41Q3LFD5 358 aa12.98□□□□□ -0.33
IFT20-207ENST00000578547 RTP2Q5QGT7 225 aa12.98□□□□□ -0.33
IFT20-207ENST00000578547 VARS2Q5ST30 1063 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms