RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 TRAPPC3O43617 180 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 HBP1O60381 514 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 B4GALT4O60513 344 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 KIAA0754O94854 1291 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 IL18RAPO95256 599 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CST3P01034 146 aaPredicted RBP9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 KRT1P04264 644 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 PGK2P07205 417 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 HOXC6P09630 235 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SRGAP2CP0DJJ0 459 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 IVDP26440 423 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TMOD1P28289 359 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CDH5P33151 784 aaPredicted RBP9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 NF2P35240 595 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 GJC1P36383 396 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SSR1P43307 286 aaKnown RBP9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SEC24CP53992 1094 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ZNF699Q32M78 642 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ZNF568Q3ZCX4 644 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ATF7IP2Q5U623 682 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 LRRC38Q5VT99 294 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 DNAJC24Q6P3W2 148 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CCDC62Q6P9F0 684 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TSHZ1Q6ZSZ6 1077 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CCDC25Q86WR0 208 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TRIM50Q86XT4 487 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 RCOR2Q8IZ40 523 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SHCBP1Q8NEM2 672 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 RAPGEF5Q92565 580 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CLMNQ96JQ2 1002 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CCDC114Q96M63 670 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SCLT1Q96NL6 688 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 XPO6Q96QU8 1125 aaKnown RBP9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SELENOSQ9BQE4 189 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 OSBPL8Q9BZF1 889 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CDC42EP4Q9H3Q1 356 aaKnown RBP9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 R3HDMLQ9H3Y0 253 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 FZD8Q9H461 694 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SMARCAD1Q9H4L7 1026 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 MROH8Q9H579 483 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 PTPRHQ9HD43 1115 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 PPANQ9NQ55 473 aaKnown RBP9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 AAASQ9NRG9 546 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CISHQ9NSE2 258 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 RBPJLQ9UBG7 517 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ANAPC5Q9UJX4 755 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TNFSF13BQ9Y275 285 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 R3HDM2Q9Y2K5 976 aaKnown RBP9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 NEU2Q9Y3R4 380 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ZSWIM8A7E2V4 1837 aa9.91□□□□□ -0.82
CDK5RAP3-208ENST00000578525 POLR2AP24928 1970 aaKnown RBP9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SBF1O95248 1867 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TLDC2A0PJX2 215 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ASB14A6NK59 587 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 O00370 1275 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 RASGRF2O14827 1237 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 GJB6O95452 261 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CPP00450 1065 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CD58P19256 250 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 PTPN7P35236 360 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CHKAP35790 457 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 MMP13P45452 471 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ITGA8P53708 1063 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 COPS2P61201 443 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TFAMQ00059 246 aaKnown RBP9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 LMNB2Q03252 620 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 NFX1Q12986 1120 aaKnown RBP9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 MOGSQ13724 837 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 LLGL1Q15334 1064 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TMEM132AQ24JP5 1023 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 HSDL1Q3SXM5 330 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TNFAIP8L3Q5GJ75 292 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ZNF484Q5JVG2 852 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 UBAP2Q5T6F2 1119 aaKnown RBP9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ERMARDQ5T6L9 678 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 EEF1DP3Q658K8 133 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SCARA3Q6AZY7 606 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 MFSD5Q6N075 450 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 GPAT2Q6NUI2 795 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CEP128Q6ZU80 1094 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ZNF365Q70YC5 407 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 FASTKD5Q7L8L6 764 aaKnown RBP9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ARMC9Q7Z3E5 817 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 RHPN2Q8IUC4 686 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 FBXO16Q8IX29 292 aaPredicted RBP9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 UHMK1Q8TAS1 419 aaKnown RBP9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 EPS8L3Q8TE67 593 aaKnown RBP9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 PPM1EQ8WY54 764 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CDCA5Q96FF9 252 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 FAXDC2Q96IV6 333 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SLITRK1Q96PX8 696 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TRAIPQ9BWF2 469 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 HEMGNQ9BXL5 484 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 FOXP3Q9BZS1 431 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CDT1Q9H211 546 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 RPF1Q9H9Y2 349 aaKnown RBP9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TXNRD2Q9NNW7 524 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 DDX56Q9NY93 547 aaKnown RBP9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CEP83Q9Y592 693 aa9.9□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SMIM23A6NLE4 172 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms