RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 SCFD2Q8WU76 684 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 APOL6Q9BWW8 343 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 KLHL11Q9NVR0 708 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 GTSE1Q9NYZ3 720 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 FBXO40Q9UH90 709 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 PRR12Q9ULL5 1215 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 ATP5BP06576 529 aaKnown RBP10.88□□□□□ -0.67
PTPRM-205ENST00000577827 IL10P22301 178 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 IFI35P80217 286 aaPredicted RBP10.88□□□□□ -0.67
PTPRM-205ENST00000577827 KYAT1Q16773 422 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 ZNF720Q7Z2F6 126 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 ADGRA1Q86SQ6 560 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 SCUBE1Q8IWY4 988 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 TMC2Q8TDI7 906 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 ARHGEF1Q92888 912 aaKnown RBP10.88□□□□□ -0.67
PTPRM-205ENST00000577827 MXRA8Q9BRK3 442 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 TDRD3Q9H7E2 651 aaKnown RBP10.88□□□□□ -0.67
PTPRM-205ENST00000577827 PCDHA3Q9Y5H8 950 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 ADCY3O60266 1144 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 SGPL1O95470 568 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 HDAC4P56524 1084 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 CCNYL1Q8N7R7 359 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 CKAP2Q8WWK9 683 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 CRAMP1Q96RY5 1269 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 HSD3B7Q9H2F3 369 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 RNPEPL1Q9HAU8 725 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 PAIP2BQ9ULR5 123 aaKnown RBP10.87□□□□□ -0.67
PTPRM-205ENST00000577827 SNX5Q9Y5X3 404 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 IGSF9BQ9UPX0 1349 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 TTC36A6NLP5 189 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 RBAK-RBAKDNI3L0D1 243 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 SKIV2L2P42285 1042 aaKnown RBP10.87□□□□□ -0.67
PTPRM-205ENST00000577827 C1orf228Q6PIY5 440 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 NDUFAF2Q8N183 169 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 TBC1D16Q8TBP0 767 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 SPATA18Q8TC71 538 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 ATG4AQ8WYN0 398 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 NLRP4Q96MN2 994 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 RNF146Q9NTX7 359 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 PCYOX1Q9UHG3 505 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 NUB1Q9Y5A7 615 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 SLC4A7Q9Y6M7 1214 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 TCHHQ07283 1943 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 RSPH10B2B2RC85 870 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 PIK3CDO00329 1044 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 EXTL3O43909 919 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 ENTPD3O75355 529 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 RSPH10BP0C881 870 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 MAPTP10636 758 aaKnown RBP10.87□□□□□ -0.67
PTPRM-205ENST00000577827 PHKA2P46019 1235 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 SLC34A1Q06495 639 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 XRCC4Q13426 336 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 RIPK1Q13546 671 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 MTFR1Q15390 333 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 MFN1Q8IWA4 741 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 DCLK2Q8N568 766 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 OR6B3Q8NGW1 331 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 TTC8Q8TAM2 541 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 MAML3Q96JK9 1138 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 FAM111AQ96PZ2 611 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 PURBQ96QR8 312 aaKnown RBP10.87□□□□□ -0.67
PTPRM-205ENST00000577827 KLF6Q99612 283 aaPredicted RBP10.87□□□□□ -0.67
PTPRM-205ENST00000577827 FAM192AQ9GZU8 254 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 PCMTD2Q9NV79 361 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 SLC5A4Q9NY91 659 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 MARCOQ9UEW3 520 aaPredicted RBP10.87□□□□□ -0.67
PTPRM-205ENST00000577827 CACNA1FO60840 1977 aa10.87□□□□□ -0.67
PTPRM-205ENST00000577827 TRIM49D1C9J1S8 452 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 SLC10A5Q5PT55 438 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 RNF43Q68DV7 783 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 MTDHQ86UE4 582 aaKnown RBP10.86□□□□□ -0.67
PTPRM-205ENST00000577827 IRF2BP1Q8IU81 584 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 EME1Q96AY2 570 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 THAP11Q96EK4 314 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 MTMR9Q96QG7 549 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 ADAM33Q9BZ11 813 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 NACA2Q9H009 215 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 MMADHCQ9H3L0 296 aaPredicted RBP10.86□□□□□ -0.67
PTPRM-205ENST00000577827 RAVER2Q9HCJ3 691 aaKnown RBP10.86□□□□□ -0.67
PTPRM-205ENST00000577827 TBC1D23Q9NUY8 699 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 ARHGAP26Q9UNA1 814 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 MAFGO15525 162 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 LCA5LO95447 670 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 KRT16P08779 473 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 PAX7P23759 505 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 CHI3L2Q15782 390 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 CNGA2Q16280 664 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 UGP2Q16851 508 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 LRRC36Q1X8D7 754 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 LACTB2Q53H82 288 aaPredicted RBP10.86□□□□□ -0.67
PTPRM-205ENST00000577827 TMPRSS6Q8IU80 811 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 KRT35Q92764 455 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 ATP6V1E2Q96A05 226 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 DHX35Q9H5Z1 703 aaKnown RBP10.86□□□□□ -0.67
PTPRM-205ENST00000577827 WARS2Q9UGM6 360 aaKnown RBP10.86□□□□□ -0.67
PTPRM-205ENST00000577827 ARHGEF37A1IGU5 675 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 STRNO43815 780 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 ABL1P00519 1130 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 SPRP35270 261 aaPredicted RBP10.86□□□□□ -0.67
PTPRM-205ENST00000577827 INPP5AQ14642 412 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms