RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 KINO60870 393 aaKnown RBP25.33■■□□□ 1.65
SNF8-217ENST00000576353 KRT19P08727 400 aa25.33■■□□□ 1.65
SNF8-217ENST00000576353 DLATP10515 647 aaKnown RBP25.33■■□□□ 1.65
SNF8-217ENST00000576353 CPB1P15086 417 aa25.33■■□□□ 1.65
SNF8-217ENST00000576353 TNNI1P19237 187 aa25.33■■□□□ 1.65
SNF8-217ENST00000576353 PLXNA3P51805 1871 aa25.33■■□□□ 1.65
SNF8-217ENST00000576353 OTOP3Q7RTS5 596 aa25.33■■□□□ 1.65
SNF8-217ENST00000576353 ELOA2Q8IYF1 753 aaPredicted RBP25.33■■□□□ 1.65
SNF8-217ENST00000576353 CCDC127Q96BQ5 260 aa25.33■■□□□ 1.65
SNF8-217ENST00000576353 ACSF2Q96CM8 615 aaPredicted RBP25.33■■□□□ 1.65
SNF8-217ENST00000576353 BORCS6Q96GS4 357 aa25.33■■□□□ 1.65
SNF8-217ENST00000576353 PI4K2BG5E9Z4 385 aa25.32■■□□□ 1.64
SNF8-217ENST00000576353 PRRG1O14668 218 aa25.32■■□□□ 1.64
SNF8-217ENST00000576353 NR3C1P04150 777 aa25.32■■□□□ 1.64
SNF8-217ENST00000576353 POU2F2P09086 479 aa25.32■■□□□ 1.64
SNF8-217ENST00000576353 SP100P23497 879 aaPredicted RBP25.32■■□□□ 1.64
SNF8-217ENST00000576353 MYO1EQ12965 1108 aa25.32■■□□□ 1.64
SNF8-217ENST00000576353 LMBRD2Q68DH5 695 aaPredicted RBP25.32■■□□□ 1.64
SNF8-217ENST00000576353 TCEAL8Q8IYN2 117 aa25.32■■□□□ 1.64
SNF8-217ENST00000576353 PLCD3Q8N3E9 789 aa25.32■■□□□ 1.64
SNF8-217ENST00000576353 TDRD5Q8NAT2 981 aaKnown RBP25.32■■□□□ 1.64
SNF8-217ENST00000576353 OR5B17Q8NGF7 314 aa25.32■■□□□ 1.64
SNF8-217ENST00000576353 CXorf38Q8TB03 319 aa25.32■■□□□ 1.64
SNF8-217ENST00000576353 KHSRPQ92945 711 aaKnown RBP eCLIP25.32■■□□□ 1.648e-7■□□□□ 9
SNF8-217ENST00000576353 CGRRF1Q99675 332 aa25.32■■□□□ 1.64
SNF8-217ENST00000576353 GTPBP4Q9BZE4 634 aaKnown RBP25.32■■□□□ 1.64
SNF8-217ENST00000576353 AFF4Q9UHB7 1163 aaKnown RBP25.32■■□□□ 1.64
SNF8-217ENST00000576353 MAPK8IP1Q9UQF2 711 aa25.32■■□□□ 1.64
SNF8-217ENST00000576353 C2CD4DB7Z1M9 353 aa25.31■■□□□ 1.64
SNF8-217ENST00000576353 DCXO43602 365 aa25.31■■□□□ 1.64
SNF8-217ENST00000576353 GADD45BO75293 160 aaPredicted RBP25.31■■□□□ 1.64
SNF8-217ENST00000576353 THEM5Q8N1Q8 247 aa25.31■■□□□ 1.64
SNF8-217ENST00000576353 SMARCE1Q969G3 411 aa25.31■■□□□ 1.64
SNF8-217ENST00000576353 CYP4F11Q9HBI6 524 aa25.31■■□□□ 1.64
SNF8-217ENST00000576353 SIX4Q9UIU6 781 aa25.31■■□□□ 1.64
SNF8-217ENST00000576353 ANK1P16157 1881 aa25.31■■□□□ 1.64
SNF8-217ENST00000576353 CLUHO75153 1309 aa25.31■■□□□ 1.64
SNF8-217ENST00000576353 PTPRJQ12913 1337 aa25.31■■□□□ 1.64
SNF8-217ENST00000576353 CCL16O15467 120 aa25.3■■□□□ 1.64
SNF8-217ENST00000576353 HUS1O60921 280 aa25.3■■□□□ 1.64
SNF8-217ENST00000576353 ADCY1Q08828 1119 aa25.3■■□□□ 1.64
SNF8-217ENST00000576353 BFSP1Q12934 665 aa25.3■■□□□ 1.64
SNF8-217ENST00000576353 GPR17Q13304 367 aa25.3■■□□□ 1.64
SNF8-217ENST00000576353 TRAPPC11Q7Z392 1133 aa25.3■■□□□ 1.64
SNF8-217ENST00000576353 ZDHHC14Q8IZN3 488 aa25.3■■□□□ 1.64
SNF8-217ENST00000576353 SPATA20Q8TB22 786 aa25.3■■□□□ 1.64
SNF8-217ENST00000576353 FAM84AQ96KN4 292 aa25.3■■□□□ 1.64
SNF8-217ENST00000576353 EPHX3Q9H6B9 360 aa25.3■■□□□ 1.64
SNF8-217ENST00000576353 GDAP2Q9NXN4 497 aa25.3■■□□□ 1.64
SNF8-217ENST00000576353 POLIQ9UNA4 740 aa25.3■■□□□ 1.64
SNF8-217ENST00000576353 FRMD4BQ9Y2L6 1034 aa25.3■■□□□ 1.64
SNF8-217ENST00000576353 PCDHA5Q9Y5H7 936 aa25.3■■□□□ 1.64
SNF8-217ENST00000576353 LRG1P02750 347 aa25.29■■□□□ 1.64
SNF8-217ENST00000576353 RPL13P26373 211 aaKnown RBP25.29■■□□□ 1.64
SNF8-217ENST00000576353 NFIL3Q16649 462 aa25.29■■□□□ 1.64
SNF8-217ENST00000576353 ZNF658Q5TYW1 1059 aaPredicted RBP25.29■■□□□ 1.64
SNF8-217ENST00000576353 WSCD1Q658N2 575 aa25.29■■□□□ 1.64
SNF8-217ENST00000576353 RNF19BQ6ZMZ0 732 aa25.29■■□□□ 1.64
SNF8-217ENST00000576353 HPDLQ96IR7 371 aa25.29■■□□□ 1.64
SNF8-217ENST00000576353 C1QTNF1Q9BXJ1 281 aa25.29■■□□□ 1.64
SNF8-217ENST00000576353 MUC3AQ02505 3323 aa25.29■■□□□ 1.64
SNF8-217ENST00000576353 SEC24AO95486 1093 aa25.28■■□□□ 1.64
SNF8-217ENST00000576353 AP3M2P53677 418 aa25.28■■□□□ 1.64
SNF8-217ENST00000576353 UBE2HP62256 183 aa25.28■■□□□ 1.64
SNF8-217ENST00000576353 GRASPQ7Z6J2 395 aaPredicted RBP25.28■■□□□ 1.64
SNF8-217ENST00000576353 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.28■■□□□ 1.64
SNF8-217ENST00000576353 MUTYHQ9UIF7 546 aa25.28■■□□□ 1.64
SNF8-217ENST00000576353 MTCL1Q9Y4B5 1905 aaKnown RBP25.27■■□□□ 1.64
SNF8-217ENST00000576353 C5orf42Q9H799 3197 aa25.27■■□□□ 1.64
SNF8-217ENST00000576353 OR4Q2P0C623 313 aa25.27■■□□□ 1.64
SNF8-217ENST00000576353 CEP135Q66GS9 1140 aa25.27■■□□□ 1.64
SNF8-217ENST00000576353 TMEM86AQ8N2M4 240 aa25.27■■□□□ 1.64
SNF8-217ENST00000576353 PARD3BQ8TEW8 1205 aa25.27■■□□□ 1.64
SNF8-217ENST00000576353 INSL5Q9Y5Q6 135 aa25.27■■□□□ 1.64
SNF8-217ENST00000576353 SNX9Q9Y5X1 595 aa25.27■■□□□ 1.64
SNF8-217ENST00000576353 MAPK13O15264 365 aa25.26■■□□□ 1.63
SNF8-217ENST00000576353 FSHRP23945 695 aa25.26■■□□□ 1.63
SNF8-217ENST00000576353 NR2F2P24468 414 aa25.26■■□□□ 1.63
SNF8-217ENST00000576353 GBP2P32456 591 aaPredicted RBP25.26■■□□□ 1.63
SNF8-217ENST00000576353 CASP4P49662 377 aa25.26■■□□□ 1.63
SNF8-217ENST00000576353 CLDN10P78369 228 aa25.26■■□□□ 1.63
SNF8-217ENST00000576353 COBLL1Q53SF7 1204 aa25.26■■□□□ 1.63
SNF8-217ENST00000576353 SCARA3Q6AZY7 606 aa25.26■■□□□ 1.63
SNF8-217ENST00000576353 DPH6Q7L8W6 267 aa25.26■■□□□ 1.63
SNF8-217ENST00000576353 SMYD4Q8IYR2 804 aaPredicted RBP25.26■■□□□ 1.63
SNF8-217ENST00000576353 PDCL2Q8N4E4 241 aa25.26■■□□□ 1.63
SNF8-217ENST00000576353 TOP6BLQ8N6T0 577 aa25.26■■□□□ 1.63
SNF8-217ENST00000576353 OR10T2Q8NGX3 314 aa25.26■■□□□ 1.63
SNF8-217ENST00000576353 SPATA18Q8TC71 538 aa25.26■■□□□ 1.63
SNF8-217ENST00000576353 ZNF516Q92618 1163 aa25.26■■□□□ 1.63
SNF8-217ENST00000576353 ERCC4Q92889 916 aaPredicted RBP25.26■■□□□ 1.63
SNF8-217ENST00000576353 ZCWPW1Q9H0M4 648 aa25.26■■□□□ 1.63
SNF8-217ENST00000576353 GZF1Q9H116 711 aaPredicted RBP25.26■■□□□ 1.63
SNF8-217ENST00000576353 SMARCB1Q12824 385 aa25.25■■□□□ 1.63
SNF8-217ENST00000576353 ADAM9Q13443 819 aa25.25■■□□□ 1.63
SNF8-217ENST00000576353 TRPC3Q13507 836 aa25.25■■□□□ 1.63
SNF8-217ENST00000576353 EDRF1Q3B7T1 1238 aa25.25■■□□□ 1.63
SNF8-217ENST00000576353 ELMOD1Q8N336 334 aa25.25■■□□□ 1.63
SNF8-217ENST00000576353 PLEKHO2Q8TD55 490 aa25.25■■□□□ 1.63
SNF8-217ENST00000576353 TMC2Q8TDI7 906 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms