RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 REEP2Q9BRK0 252 aa11.35□□□□□ -0.59
TVP23B-208ENST00000575261 RPF1Q9H9Y2 349 aaKnown RBP11.35□□□□□ -0.59
TVP23B-208ENST00000575261 PARVGQ9HBI0 331 aa11.35□□□□□ -0.59
TVP23B-208ENST00000575261 DLL3Q9NYJ7 618 aa11.35□□□□□ -0.59
TVP23B-208ENST00000575261 TIMM13Q9Y5L4 95 aaPredicted RBP11.35□□□□□ -0.59
TVP23B-208ENST00000575261 NUP210Q8TEM1 1887 aaPredicted RBP11.35□□□□□ -0.59
TVP23B-208ENST00000575261 NCANO14594 1321 aa11.35□□□□□ -0.59
TVP23B-208ENST00000575261 A0A1W2PRU2 124 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 HEPACAM2A8MVW5 462 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 LACTBL1A8MY62 500 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 ARNTLO00327 626 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 FAM189A1O60320 539 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 VNN2O95498 520 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 TYMPP19971 482 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 SDHBP21912 280 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 PAX3P23760 479 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 GJB2P29033 226 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 ABCD1P33897 745 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 UBA7P41226 1012 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 VIPR2P41587 438 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 ALDH1A3P47895 512 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 CCR3P51677 355 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 ZNF131P52739 623 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 NRLP54845 237 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 DUSP4Q13115 394 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 MYBPC2Q14324 1141 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 ARSHQ5FYA8 562 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 MAMSTRQ6ZN01 415 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 GPBP1Q86WP2 473 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 YAF2Q8IY57 180 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 CSGALNACT1Q8TDX6 532 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 MSTO1Q9BUK6 570 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 DNAJC25Q9H1X3 360 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 CRISPLD1Q9H336 500 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 TBX20Q9UMR3 447 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 ASB3Q9Y575 518 aa11.34□□□□□ -0.59
TVP23B-208ENST00000575261 A0A0B4J269 797 aa11.33□□□□□ -0.6
TVP23B-208ENST00000575261 MED19A0JLT2 244 aaPredicted RBP11.33□□□□□ -0.6
TVP23B-208ENST00000575261 MTMR11A4FU01 709 aa11.33□□□□□ -0.6
TVP23B-208ENST00000575261 CHADO15335 359 aa11.33□□□□□ -0.6
TVP23B-208ENST00000575261 TBCAO75347 108 aaKnown RBP11.33□□□□□ -0.6
TVP23B-208ENST00000575261 FGF19O95750 216 aa11.33□□□□□ -0.6
TVP23B-208ENST00000575261 KRT18P05783 430 aaKnown RBP11.33□□□□□ -0.6
TVP23B-208ENST00000575261 TDGF1P13385 188 aa11.33□□□□□ -0.6
TVP23B-208ENST00000575261 GUCY2FP51841 1108 aa11.33□□□□□ -0.6
TVP23B-208ENST00000575261 MLLT6P55198 1093 aaPredicted RBP11.33□□□□□ -0.6
TVP23B-208ENST00000575261 LILRA4P59901 499 aa11.33□□□□□ -0.6
TVP23B-208ENST00000575261 LMNB2Q03252 620 aa11.33□□□□□ -0.6
TVP23B-208ENST00000575261 FCHO2Q0JRZ9 810 aa11.33□□□□□ -0.6
TVP23B-208ENST00000575261 LRRC32Q14392 662 aa11.33□□□□□ -0.6
TVP23B-208ENST00000575261 RSPO4Q2I0M5 234 aaPredicted RBP11.33□□□□□ -0.6
TVP23B-208ENST00000575261 SPATA1Q5VX52 437 aa11.33□□□□□ -0.6
TVP23B-208ENST00000575261 CENPPQ6IPU0 288 aa11.33□□□□□ -0.6
TVP23B-208ENST00000575261 ARMCX5Q6P1M9 558 aa11.33□□□□□ -0.6
TVP23B-208ENST00000575261 ITIH5Q86UX2 942 aa11.33□□□□□ -0.6
TVP23B-208ENST00000575261 CD302Q8IX05 232 aa11.33□□□□□ -0.6
TVP23B-208ENST00000575261 MYCT1Q8N699 235 aa11.33□□□□□ -0.6
TVP23B-208ENST00000575261 RASSF8Q8NHQ8 419 aa11.33□□□□□ -0.6
TVP23B-208ENST00000575261 PSMG2Q969U7 264 aa11.33□□□□□ -0.6
TVP23B-208ENST00000575261 FAM212AQ96EL1 285 aa11.33□□□□□ -0.6
TVP23B-208ENST00000575261 TMX3Q96JJ7 454 aa11.33□□□□□ -0.6
TVP23B-208ENST00000575261 LRRC3Q9BY71 257 aa11.33□□□□□ -0.6
TVP23B-208ENST00000575261 LMAN1LQ9HAT1 526 aa11.33□□□□□ -0.6
TVP23B-208ENST00000575261 HSFX1Q9UBD0 423 aa11.33□□□□□ -0.6
TVP23B-208ENST00000575261 GMEB2Q9UKD1 530 aa11.33□□□□□ -0.6
TVP23B-208ENST00000575261 CPSF3Q9UKF6 684 aaKnown RBP11.33□□□□□ -0.6
TVP23B-208ENST00000575261 RAB23Q9ULC3 237 aa11.33□□□□□ -0.6
TVP23B-208ENST00000575261 ANK1P16157 1881 aa11.32□□□□□ -0.6
TVP23B-208ENST00000575261 PPEF2O14830 753 aa11.32□□□□□ -0.6
TVP23B-208ENST00000575261 TRAK2O60296 914 aa11.32□□□□□ -0.6
TVP23B-208ENST00000575261 BMP15O95972 392 aa11.32□□□□□ -0.6
TVP23B-208ENST00000575261 ADRB2P07550 413 aa11.32□□□□□ -0.6
TVP23B-208ENST00000575261 NFICP08651 508 aa11.32□□□□□ -0.6
TVP23B-208ENST00000575261 PLCG1P19174 1290 aa11.32□□□□□ -0.6
TVP23B-208ENST00000575261 CCNE1P24864 410 aa11.32□□□□□ -0.6
TVP23B-208ENST00000575261 DHX8Q14562 1220 aaKnown RBP11.32□□□□□ -0.6
TVP23B-208ENST00000575261 TMEM132DQ14C87 1099 aa11.32□□□□□ -0.6
TVP23B-208ENST00000575261 VEPH1Q14D04 833 aa11.32□□□□□ -0.6
TVP23B-208ENST00000575261 STXBP5Q5T5C0 1151 aa11.32□□□□□ -0.6
TVP23B-208ENST00000575261 C9orf57Q5W0N0 161 aa11.32□□□□□ -0.6
TVP23B-208ENST00000575261 JADE1Q6IE81 842 aa11.32□□□□□ -0.6
TVP23B-208ENST00000575261 SLC39A4Q6P5W5 647 aa11.32□□□□□ -0.6
TVP23B-208ENST00000575261 ATAD1Q8NBU5 361 aa11.32□□□□□ -0.6
TVP23B-208ENST00000575261 FAM200AQ8TCP9 573 aa11.32□□□□□ -0.6
TVP23B-208ENST00000575261 RSPRY1Q96DX4 576 aa11.32□□□□□ -0.6
TVP23B-208ENST00000575261 SENP8Q96LD8 212 aa11.32□□□□□ -0.6
TVP23B-208ENST00000575261 ZHX3Q9H4I2 956 aa11.32□□□□□ -0.6
TVP23B-208ENST00000575261 C8orf33Q9H7E9 229 aaPredicted RBP11.32□□□□□ -0.6
TVP23B-208ENST00000575261 BLOC1S4Q9NUP1 217 aa11.32□□□□□ -0.6
TVP23B-208ENST00000575261 CDV3Q9UKY7 258 aaKnown RBP11.32□□□□□ -0.6
TVP23B-208ENST00000575261 DSEQ9UL01 958 aa11.32□□□□□ -0.6
TVP23B-208ENST00000575261 USP18Q9UMW8 372 aa11.32□□□□□ -0.6
TVP23B-208ENST00000575261 DERAQ9Y315 318 aa11.32□□□□□ -0.6
TVP23B-208ENST00000575261 SLC38A8A6NNN8 435 aa11.31□□□□□ -0.6
TVP23B-208ENST00000575261 PRR5-ARHGAP8B1AHC4 643 aa11.31□□□□□ -0.6
TVP23B-208ENST00000575261 DPYSL4O14531 572 aa11.31□□□□□ -0.6
TVP23B-208ENST00000575261 CYP11A1P05108 521 aa11.31□□□□□ -0.6
TVP23B-208ENST00000575261 CHRNB1P11230 501 aa11.31□□□□□ -0.6
TVP23B-208ENST00000575261 GABRR2P28476 465 aa11.31□□□□□ -0.6
TVP23B-208ENST00000575261 LONP1P36776 959 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms