RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 ING5Q8WYH8 240 aa18.74■□□□□ 0.59
SMG6-212ENST00000573153 C7orf25Q9BPX7 421 aa18.74■□□□□ 0.59
SMG6-212ENST00000573153 FAM213AQ9BRX8 229 aa18.74■□□□□ 0.59
SMG6-212ENST00000573153 YIPF1Q9Y548 306 aa18.74■□□□□ 0.59
SMG6-212ENST00000573153 MTMR11A4FU01 709 aa18.73■□□□□ 0.59
SMG6-212ENST00000573153 SHISA7A6NL88 538 aa18.73■□□□□ 0.59
SMG6-212ENST00000573153 TGFB1I1O43294 461 aa18.73■□□□□ 0.59
SMG6-212ENST00000573153 CFHP08603 1231 aa18.73■□□□□ 0.59
SMG6-212ENST00000573153 AOC1P19801 751 aa18.73■□□□□ 0.59
SMG6-212ENST00000573153 CLCN5P51795 746 aa18.73■□□□□ 0.59
SMG6-212ENST00000573153 SIX5Q8N196 739 aa18.73■□□□□ 0.59
SMG6-212ENST00000573153 PLA2G2FQ9BZM2 168 aa18.73■□□□□ 0.59
SMG6-212ENST00000573153 GZF1Q9H116 711 aaPredicted RBP18.73■□□□□ 0.59
SMG6-212ENST00000573153 DPP3Q9NY33 737 aa18.73■□□□□ 0.59
SMG6-212ENST00000573153 MAFFQ9ULX9 164 aa18.73■□□□□ 0.59
SMG6-212ENST00000573153 PIEZO1Q92508 2521 aa18.73■□□□□ 0.59
SMG6-212ENST00000573153 MYO15AQ9UKN7 3530 aa18.73■□□□□ 0.59
SMG6-212ENST00000573153 DMDP11532 3685 aa18.72■□□□□ 0.59
SMG6-212ENST00000573153 GOLGA8IPA6NC78 632 aa18.72■□□□□ 0.59
SMG6-212ENST00000573153 OR6C75A6NL08 312 aa18.72■□□□□ 0.59
SMG6-212ENST00000573153 GOLGA8JA6NMD2 632 aa18.72■□□□□ 0.59
SMG6-212ENST00000573153 PRRG1O14668 218 aa18.72■□□□□ 0.59
SMG6-212ENST00000573153 ME1P48163 572 aa18.72■□□□□ 0.59
SMG6-212ENST00000573153 TWF1Q12792 350 aa18.72■□□□□ 0.59
SMG6-212ENST00000573153 MYBPC2Q14324 1141 aa18.72■□□□□ 0.59
SMG6-212ENST00000573153 OVOS1Q6IE37 1185 aa18.72■□□□□ 0.59
SMG6-212ENST00000573153 CENPPQ6IPU0 288 aa18.72■□□□□ 0.59
SMG6-212ENST00000573153 DSTYKQ6XUX3 929 aa18.72■□□□□ 0.59
SMG6-212ENST00000573153 NT5DC4Q86YG4 428 aa18.72■□□□□ 0.59
SMG6-212ENST00000573153 ZNF507Q8TCN5 953 aa18.72■□□□□ 0.59
SMG6-212ENST00000573153 PGLYRP2Q96PD5 576 aa18.72■□□□□ 0.59
SMG6-212ENST00000573153 PYM1Q9BRP8 204 aaKnown RBP18.72■□□□□ 0.59
SMG6-212ENST00000573153 DLGAP2Q9P1A6 1054 aa18.72■□□□□ 0.59
SMG6-212ENST00000573153 SIX4Q9UIU6 781 aa18.72■□□□□ 0.59
SMG6-212ENST00000573153 EIF3DO15371 548 aaKnown RBP eCLIP18.71■□□□□ 0.59
SMG6-212ENST00000573153 POLR2DO15514 142 aaKnown RBP18.71■□□□□ 0.59
SMG6-212ENST00000573153 GALR2O43603 387 aaPredicted RBP18.71■□□□□ 0.59
SMG6-212ENST00000573153 ACTN4O43707 911 aaKnown RBP18.71■□□□□ 0.59
SMG6-212ENST00000573153 KLRC4O43908 158 aa18.71■□□□□ 0.59
SMG6-212ENST00000573153 EXTL3O43909 919 aa18.71■□□□□ 0.59
SMG6-212ENST00000573153 MICAL2O94851 1124 aa18.71■□□□□ 0.59
SMG6-212ENST00000573153 IL18RAPO95256 599 aa18.71■□□□□ 0.59
SMG6-212ENST00000573153 LRG1P02750 347 aa18.71■□□□□ 0.59
SMG6-212ENST00000573153 CPB1P15086 417 aa18.71■□□□□ 0.59
SMG6-212ENST00000573153 PTPN2P17706 415 aa18.71■□□□□ 0.59
SMG6-212ENST00000573153 NUBP1P53384 320 aa18.71■□□□□ 0.59
SMG6-212ENST00000573153 GPC5P78333 572 aa18.71■□□□□ 0.59
SMG6-212ENST00000573153 LRRTM3Q86VH5 581 aa18.71■□□□□ 0.59
SMG6-212ENST00000573153 ATAD1Q8NBU5 361 aa18.71■□□□□ 0.59
SMG6-212ENST00000573153 SCFD1Q8WVM8 642 aa18.71■□□□□ 0.59
SMG6-212ENST00000573153 KXD1Q9BQD3 176 aa18.71■□□□□ 0.59
SMG6-212ENST00000573153 CORO1BQ9BR76 489 aa18.71■□□□□ 0.59
SMG6-212ENST00000573153 MKNK1Q9BUB5 465 aa18.71■□□□□ 0.59
SMG6-212ENST00000573153 OXCT2Q9BYC2 517 aaPredicted RBP18.71■□□□□ 0.59
SMG6-212ENST00000573153 PCIF1Q9H4Z3 704 aa18.71■□□□□ 0.59
SMG6-212ENST00000573153 TMEM206Q9H813 350 aa18.71■□□□□ 0.59
SMG6-212ENST00000573153 PDE11AQ9HCR9 933 aa18.71■□□□□ 0.59
SMG6-212ENST00000573153 FAM13BQ9NYF5 915 aa18.71■□□□□ 0.59
SMG6-212ENST00000573153 RBAKQ9NYW8 714 aaPredicted RBP18.71■□□□□ 0.59
SMG6-212ENST00000573153 MRPS23Q9Y3D9 190 aaKnown RBP18.71■□□□□ 0.59
SMG6-212ENST00000573153 USP34Q70CQ2 3546 aa18.7■□□□□ 0.58
SMG6-212ENST00000573153 ODC1P11926 461 aa18.7■□□□□ 0.58
SMG6-212ENST00000573153 TAF6P49848 677 aa18.7■□□□□ 0.58
SMG6-212ENST00000573153 PTPN5P54829 565 aa18.7■□□□□ 0.58
SMG6-212ENST00000573153 ASIC1P78348 528 aa18.7■□□□□ 0.58
SMG6-212ENST00000573153 DUSP4Q13115 394 aa18.7■□□□□ 0.58
SMG6-212ENST00000573153 CUL4BQ13620 913 aa18.7■□□□□ 0.58
SMG6-212ENST00000573153 WSCD1Q658N2 575 aa18.7■□□□□ 0.58
SMG6-212ENST00000573153 STXBP4Q6ZWJ1 553 aa18.7■□□□□ 0.58
SMG6-212ENST00000573153 UNC13DQ70J99 1090 aa18.7■□□□□ 0.58
SMG6-212ENST00000573153 LIMS2Q7Z4I7 341 aa18.7■□□□□ 0.58
SMG6-212ENST00000573153 CBWD2Q8IUF1 395 aa18.7■□□□□ 0.58
SMG6-212ENST00000573153 GRAMD1CQ8IYS0 662 aa18.7■□□□□ 0.58
SMG6-212ENST00000573153 MCRS1Q96EZ8 462 aa18.7■□□□□ 0.58
SMG6-212ENST00000573153 ZSWIM3Q96MP5 696 aa18.7■□□□□ 0.58
SMG6-212ENST00000573153 DDX23Q9BUQ8 820 aaKnown RBP18.7■□□□□ 0.58
SMG6-212ENST00000573153 ZCWPW1Q9H0M4 648 aa18.7■□□□□ 0.58
SMG6-212ENST00000573153 BLZF1Q9H2G9 400 aa18.7■□□□□ 0.58
SMG6-212ENST00000573153 ZNF334Q9HCZ1 680 aaPredicted RBP18.7■□□□□ 0.58
SMG6-212ENST00000573153 GDE1Q9NZC3 331 aa18.7■□□□□ 0.58
SMG6-212ENST00000573153 CA14Q9ULX7 337 aa18.7■□□□□ 0.58
SMG6-212ENST00000573153 HPSEQ9Y251 543 aa18.7■□□□□ 0.58
SMG6-212ENST00000573153 KIAA0391O15091 583 aaKnown RBP18.69■□□□□ 0.58
SMG6-212ENST00000573153 SOAT2O75908 522 aa18.69■□□□□ 0.58
SMG6-212ENST00000573153 LDHAP00338 332 aaKnown RBP18.69■□□□□ 0.58
SMG6-212ENST00000573153 GJA1P17302 382 aa18.69■□□□□ 0.58
SMG6-212ENST00000573153 ATF6P18850 670 aa18.69■□□□□ 0.58
SMG6-212ENST00000573153 ELF1P32519 619 aa18.69■□□□□ 0.58
SMG6-212ENST00000573153 BMT2Q1RMZ1 405 aa18.69■□□□□ 0.58
SMG6-212ENST00000573153 FAM26FQ5R3K3 315 aa18.69■□□□□ 0.58
SMG6-212ENST00000573153 TANGO2Q6ICL3 276 aa18.69■□□□□ 0.58
SMG6-212ENST00000573153 MTSS1LQ765P7 747 aa18.69■□□□□ 0.58
SMG6-212ENST00000573153 GPD1LQ8N335 351 aa18.69■□□□□ 0.58
SMG6-212ENST00000573153 OR5B17Q8NGF7 314 aa18.69■□□□□ 0.58
SMG6-212ENST00000573153 SHKBP1Q8TBC3 707 aa18.69■□□□□ 0.58
SMG6-212ENST00000573153 LEO1Q8WVC0 666 aaPredicted RBP18.69■□□□□ 0.58
SMG6-212ENST00000573153 PKMYT1Q99640 499 aa18.69■□□□□ 0.58
SMG6-212ENST00000573153 PRRX2Q99811 253 aa18.69■□□□□ 0.58
SMG6-212ENST00000573153 ARHGEF3Q9NR81 526 aa18.69■□□□□ 0.58
SMG6-212ENST00000573153 TMLHEQ9NVH6 421 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms